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9 protocols using anti cd45ra fitc

1

Comprehensive Immunophenotyping Panel

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The following were purchased from eBiosciences: anti-IL-21 eFluor660, anti-IL-10 Alexa Fluor 488, anti-IFNγ BV605, anti-CD45RA FITC, anti-ICOS PE, anti-PD-1 biotin. The following were purchased from Becton Dickinson: anti-CXCR5 Alexa Fluor 647, anti-CD4 APC-Cy7, anti-IL-2 BV711, anti-CD25 PE-Cy7, anti-CD127 PerCP-Cy5.5, SA-PerCpCy5.5, anti-IL-17F BV786, anti-TNFα BUV395, anti-IL-9 PerCP-Cy5.5, anti-IL-13 BV421. The following were purchased from Biolegend: anti-IL-22 PE, anti-IL-4 PE-Cy7, anti-IL-17A APC-Cy7. The TCR Vß repertoire kit was from Beckman Coulter. Recombinant human IL-12 was purchased from R&D Systems.
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2

Isolation and Sorting of Immune Cell Subsets

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Peripheral blood mononuclear cells (PBMCs) were isolated from peripheral blood using Ficoll Paque Plus (GE Healthcare, Boston, MA, USA) gradient cell separation according to manufacturer’s instructions. Red blood cells were lysed using a 1× dilution of BD Pharm lyse (BD Biosciences) in sterile water and incubating the cells for 5–10 min. For total CD4, CD8, and B cell samples, isolated PBMCs were labeled sequentially with anti-human CD4 and CD8 magnetic beads (Miltenyi Biotec, San Diego, CA, USA) and respective fractions were obtained by positive magnetic selection while B cell-enriched fraction was obtained by negative selection of CD4+ and CD8+ PBMCs. For CD4 and CD8 naïve and memory populations, isolated PBMCs were labeled with mouse anti-human fluorescent antibodies: anti-CD3 PE/Cy7, anti-CD4 PE, anti-CD8 APC, anti-CD45RA FITC, and anti-CCR7 Pacific Blue (eBiosciences, San Diego, CA, USA). Cells were stained for 30 min and then washed and sorted on a BD FACS Aria II cell sorter. Naïve CD4+ and CD8+ T cells were sorted based on the CD45RA+ CCR7+ phenotype. With this sorting strategy, the naïve T cell compartment did not include CD45RA+ CCR7 cells that correspond to the exhausted effector memory T cell (TEMRA), which is often expanded in patients with WAS (Table 1). Cell purity was checked after sorting and was consistently >92%.
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3

Multiparametric Flow Cytometry of Placental Immune Cells

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As described previously,25 (link) placental MNCs were incubated with fluorochrome-conjugated monoclonal antibodies for 40 minutes at 4°C. MNCs were pre-incubated with an anti-human BD Fc blocker (BD Pharmingen, San Diego, CA, USA), followed by staining with the live/dead marker anti-FVD-APC-Cy7 (eBioscience, San Diego, CA, USA). The antibodies used in this study were anti-CD3-PerCP-Cy5.5, anti-CD3-PE-Cy7, anti-CD4-AF700, anti-CD8-PE, anti-CD8-APC, anti-CD28-APC, anti-CD45RA-FITC, anti-CD45RO-PE-Cy7, anti-CD57-FITC, and fixable viability dye-APC-Cy7 (all supplied by eBioscience). MNCs were stimulated with phorbol-myristate acetate/ionomycin/brefeldin A/monensin for 5 hours. Cells were fixed and permeabilized using a Fixation/Permeabilization Buffer kit (eBioscience). The permeabilized cells were washed and resuspended in 1% formaldehyde and further stained for intracellular cytokines with anti-interferon gamma (IFN-γ)-PE-Cy7 and anti-IL-17A-APC. Multicolor flow cytometry was performed using a BD LSRFortessa flow cytometer (BD Biosciences, San Jose, CA, USA), and data were analyzed using FlowJo software (FlowJo, LLC, Ashland, OR, USA).
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Comprehensive Immune Cell Profiling

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PBMCs were pre-incubated with an anti-mouse CD16/32 Fc blocker (BD Pharmingen, USA), followed by anti-FVD-APC-Cy7 (all supplied by eBioscience, San Diego, CA, USA) to exclude dead cells. After washing with FACS staining buffer, cells were treated with fluorochrome-conjugated monoclonal antibodies for 40 min at 4°C. The monoclonal antibodies used in this study were as follows: anti-CD3-PerCP-Cy5.5, anti-CD3-PE-Cy7, anti-CD4-AF700, anti-CD8-PE, anti-CD8-APC, anti-CD28-APC, anti-CD45RA-FITC, anti-CD45RO-PE-Cy7, anti-CD57-FITC, anti-TCR gamma/delta-FITC, fixable viability dye-APC-Cy7, anti-interferon (IFN)-γ-PE-Cy7, and anti-tumor necrosis factor (TNF)-α-APC (all supplied by eBioscience, San Diego, CA, USA). For intracellular staining, surface-stained cells were stimulated with phorbol-myristate acetate/ionomycin/brefeldin A/monensin for 5 h, and then fixed and permeabilized using a Fixation/Permeabilization Buffer kit (eBioscience, San Diego, CA, USA). The permeabilized cells were washed and resuspended in 1% formaldehyde and stained with anti-IFN-γ-PE-Cy7 and anti-TNF-α-APC. Multicolor flow cytometry was performed using a BD LSRFortessa flow cytometer (BD Biosciences, San Jose, CA, USA), and the data were analyzed by FlowJo V10 software (FlowJo, LLC, Ashland, OR, USA).
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5

Comprehensive Immunophenotyping of PBMC Subsets

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Frozen PBMCs from human healthy donors were processed as for the HS1 datasset and stained with live/dead marker and fluorochrome-conjugated antibodies against the following surface markers: anti-CD8-BUV805, anti-CD4-BUV496, anti-CD95-BUV737, anti-CD28-BB660-P, anti-ICOS-BB630, anti-CXCR3-BV785, anti-PD-1-BV750-P, anti-CXCR5-BV650, anti-CCR2-BV605, (all BD Biosciences); anti-CD3-PerCP-Vio700 (Mil-tenyi Biotec); anti-CD45RA-FITC, anti-CD14-PE-Cy5.5, fixable viability dye eFluor780 (all eBioscience); anti-CD25-BV711, anti-CD31-BV480, anti-HLA-DR-BV570, anti-CD127-BV421, anti-CCR4-PE/Dazzle 594, anti-CCR7-PE-Cy7 (all BioLegend).
Samples were stained for 60 min at 4
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6

Multiparametric Immunophenotyping of PBMCs

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The following monoclonal antibodies (MoAbs) were used to evaluate surface marker expression in ex vivo or cultured PBMC and macrophages: PE-Cy5 or PE conjugated anti-CD8 and anti-CD3, FITC-anti-CD195 (CCR5), PE-anti-CD69, PE-anti-CD25 and PerCP-Cy5-anti-CD14 (BD Bioscience), PE- or FITC-conjugated anti-CD11a (LFA-1), PE-anti-CD54 (ICAM-1), FITC-anti-CD45RA, PE-anti-CD62L and FITC-anti-CD54 (eBioscience).
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7

Multicolor Flow Cytometry Panel

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PerCP-Cy5.5-conjugated anti-TNFα, eFluor® 660 anti-GM-CSF, PE-Cy7 anti-IFNγ, PE anti-IL-17A, FITC-anti-CD45RA, PE-anti-CD45RO, eFluor® 450-anti-CD161 and unconjugated anti-CD28 antibodies (Abs) were from eBioscience. Brilliant Violet 605-anti-CCR6 and APC-anti-IL-10 Abs were purchased from BioLegend. RosetteSep negative-enrichment kits for human T cells, B cells and monocytes were from StemCell Technologies. Ficoll-Paque was from GE Healthcare, RPMI from Lonza and foetal bovine serum from Life Technologies. Lipopolysaccharide (E. coli, serotype 0111:B4), ionomycin and PMA were from Sigma-Aldrich and Golgiplug™ was from BD Bioscience and Leucoperm from AbD Serotec.
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8

Multiparametric Profiling of T Cell Subsets

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eFluor660-anti–IL-21, Alexa Fluor 488–anti–IL-10, PerCP-Cy5.5-anti–IFN-γ, FITC-anti-CD45RA, PE-anti-ICOS, and anti-Tbet, and biotin–PD-1 were from eBioscience. Alexa Fluor 488–anti-GATA3, Alexa Fluor 647–anti-CXCR5, anti-pSTAT4, anti-pSTAT5, anti-pSTAT6, APC-anti-CD10, APC-Cy7-anti-CD4, BV605-anti-IgG, BV421-CD40L, BV711-anti–IL-2, PE-anti-pSTAT1, anti-RORγt, and Bcl-6, PE-Cy7-anti-CD25, and anti-CD27, PerCP-Cy5.5-anti-CD127, anti-pSTAT3, and anti-Tbet, SA-PerCpCy5.5, and IFN-γ were obtained from BD. Pacific Blue–anti-CD20 and SA-BV605 were purchased from BioLegend. Recombinant human IL-12 was purchased from R&D Systems. TGF-β, IL-1β, IL-6, IL-21, and IL-23 were obtained from PeproTech. PGE2 was purchased from Sigma-Aldrich. Human IL-4 and IL-10 were provided by R. de Waal Malefyt (DNAX Research Institute, Palo Alto, CA).
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9

Multi-Parameter Flow Cytometry Protocol

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eFluor660-anti-IL-21, PerCP-Cy5.5-anti-IFNγ, FITC-anti-CD45RA, biotin-PD-1 were from eBiosciences. Alexa647-anti-CXCR5 and anti-pSTAT1, APC-anti-CD10, APC-Cy7-anti-CD4, BV605-anti-IgG, PE-anti-pSTAT3 and anti-CCR6, Pe-Cy7-anti-CD25 and anti-CD27, PerCpCy5.5-anti-CD127, biotin-anti-IgA, SA-PerCpCy5.5, and recombinant IFNγ were from Becton Dickinson. BV421-anti-CXCR3, Pacific Blue-anti-CD20 and SA-BV605 were from Biolegend.
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