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Stemi dv4 stereo microscope

Manufactured by Zeiss
Sourced in Germany

The Stemi DV4 Stereo Microscope is a compact and lightweight benchtop microscope designed for routine examination and inspection tasks. It features a binocular observation tube, providing a stereoscopic, three-dimensional view of the specimen. The microscope is equipped with fixed magnifications and offers optical performance suitable for a variety of applications.

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15 protocols using stemi dv4 stereo microscope

1

Microscopic Analysis of Cochlear Tissue

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After the final ABR test [see Auditory Function Evaluation (Auditory Brainstem Responses, ABR)], animals were deeply anesthetized (ketamine hydrochloride 25 mg/kg, xylazine 5 mg/kg, and acepromazine maleate 1.5 mg/kg body weight) and perfused transcardially with 0.9% NaCl (room temperature), followed by 4% paraformaldehyde at day 7 after surgery. The cochleae were quickly removed under a dissecting microscope (Zeiss Stemi DV4 Stereo Microscope, Jena, Germany) and processed for fluorescence and immunofluorescence analyses (described below). After 24 h of incubation with 4% paraformaldehyde in PBS at 4°C a pH 7.5, the cochleae were decalcified for 15 days (10% EDTA, changed daily), incubated for 48 h in cold 30% sucrose, and embedded in OCT. Frozen tissue samples were then cut into 16 μm thick sections using a Leica CM1850 cryostat (Leica Biosystems, Wetzlar, Germany). Five/ten neighboring randomly selected midmodiolus slices per cochlea were used to analyze the expression of transgenic GFP expression, as a reporter for ASC presence and survival; DAPI labeling was used to identify condensed cell nuclei. The analysis was performed using a fluorescence microscope equipped with a digital camera (Olympus BX63, Tokyo, Japan) and a confocal laser scanning system (TCS-SP2; Leica Microsystem, GmbH, Germany).
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2

Tick Infestation Assessment in Buffalo and Bovine Calves

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Adult female ticks (≥4.5 mm) [40 ] were counted on the left side of each animal, and the resulting value was multiplied by two to determine the parasite burden. This data were used to calculate the prevalence of tick infestation (TIP) (i.e., % of infested animals) and the intensity of tick infestation (TIR) (i.e., adult females/infested animals) in each group [41 ]. Tick counting was done between 7:00 to 8:00 a.m. [42 ]. The nymph/larvae ratio was compared between buffalo and bovine calves to determine the larval survival rate. For this purpose, the tick life stages were counted as described by Veríssimo et al. [43 ]; briefly, a 10 cm diameter area of the perineal region of each animal was scraped with a razor blade (Figure S1). The scraping material was collected and placed in tubes with a screw cap (15 mL) containing 3 mL of distilled water. The material was transferred to Petri dishes, and up to 100 ticks were counted on each plate using a Stemi DV4 Stereo microscope (Carl Zeiss, Oberkochen, Germany). In the counts, the numbers of larvae or nymphs were discriminated, and adult ticks were not considered. The nymph/larvae ratio was calculated as: Nymphs (%) = (nymphs/nymphs + larvae) × 100.
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3

Grain Morphology Characterization Protocol

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Images of small grains were determined using a Stemi DV4 Stereomicroscope (Brand Carl Zeiss Microscopy GmbH, Germany) with a zoom of 8X – 32X, while larger grains were taken with Scaner Laser Jet Pro (Model: 400 MFP, Series M425 DN, China), using a black background cover (0.25 m × 0.30 m), natural lighting and a 300x zoom. Shape and area analysis were performed from the images; the brightness, contrast and threshold of the images were adjusted and converted to 8-bit binary images to be analyzed using the particle analysis tool of ImageJ Software. ® (https://imagej.nih.gov/ij/). The area of the grains was calculated as the total area of the image [1 ,22 (link)]. The characteristics of the grains were evaluated according to what was described by Ubiergo & Lapp [23 ], contributions by Ferreira et al. [24 ], and Pablo-Pérez et al. [25 ], in addition, the terms to describe the shapes have been taken as reference from the descriptions used by Hoseney [26 ], Scade [27 ] and Kent [28 ]. The Remove BG online software was used to cut out the shapes, available at the following link https://pixlr.com/es/remove-background/.
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4

Microdissection of Plant Samples

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Square petri dishes 120 mm × 120 mm (Novolab, Belgium)

Round petri dishes Ø 90 mm (Novolab, Belgium)

Fine forceps

Microsurgery knives, ultra-thin blade, 15° cutting angle (Fine Science Tools catalog no. 10315–12)

Whatman cellulose chromatography paper (3MM Chr sheets, 46 × 57 cm) cut into Ø 85 mm circles (Novolab, Belgium)

Hybond N membrane paper cut into 20 × 60 mm pieces (Merck, Belgium)

Parafilm (Novolab, Belgium)

3 M Micropore tape (Novolab, Belgium)

Stereomicroscope (here, a Zeiss Stemi DV4 stereomicroscope was used)

Sterile hood

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5

Observing Cell Aggregation Dynamics

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The aggregation phenotype was directly observed after cell resuspension, after addition of 10 mM of EDTA (ethylenediaminetetraacetic acid) and after further addition of 400 μM of CaCl2. Aggregation phenotypes were observed in test tubes, by optical microscopy at low magnification (Zeiss Stemi DV4 Stereo Microscope, Oberkochen, Germany) and at high magnification (Zeiss Axio Observer Z1 equipped with Hamamatsu camera C10600, Oberkochen, Germany).
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6

Monogenean Infestation on Swordfish Gills

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From 2017 to 2018, gills of 10 dead specimens of Xiphias gladius were collected directly from local fishermen in Bouharoun (36,370 N, 2,390 E) and Cap Djinet (36,877 N, 3,720 E). Fish specimens were processed shortly after capture and morphologically identified in the field using keys [28 ]. Gills were put separately in isolating bags, transferred to the laboratory in an ice bag, and examined at the laboratory on same day. The gills were cut into several parts, placed in Petri dishes in seawater, and observed under a stereomicroscope (Carl Zeiss™ Stemi™ DV4 Stereomicroscope, Oberkochen, Germany) for monogeneans. Synonyms, and scientific and common names of fishes are those provided in WoRMS [58 ] and FishBase, respectively [29 ].
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7

Taxonomic Surrogacy of Tasmanian Spiders

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We sorted the contents of each pitfall trap under a Zeiss Stemi DV4 Stereo Microscope to extract all of the spiders. These were then identified and sorted by taxon, age class, and sex. Given the paucity of research undertaken on spider taxonomy in Tasmania, we used family‐level taxonomic surrogacy. This resolution was selected as the absence of previous spider studies on these islands means identification below this resolution is near impossible with the currently available resources. Additionally, as seabirds cause significant levels of disturbance (Smith et al., 2011 ), family‐level surrogacy should be suitable for detecting differences between sites and time periods (Bevilacqua et al., 2012 ; Driessen & Kirkpatrick, 2019 (link)). We assigned spiders to two age class categories: adult (individuals with identifiable genital structures), and immature (small individuals with no recognizable or very underdeveloped genital structures) (Supplementary S1). For immature spiders, sex, and sometimes family, could not be determined and they were classed as “unknown immatures.”
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8

Fungal Growth and Phytoalexin Assay

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Botrytis cinerea strain AI18 (Kuroyanagi et al., 2022 (link)), Epichloë festucae strain Fl1 (Young et al., 2005 (link)) and their transformants used in this study are listed in Supplementary Table 1. They were grown on potato dextrose agar (PDA) at 23°C. For the incubation in phytoalexins, mycelia plugs (approx.1 mm3) were excised from the growing edge of the colony using a dissection microscope (Stemi DV4 Stereo Microscope, Carl Zeiss, Oberkochen, Germany) and submerged in 50 μl of water or indicated phytoalexin in a sealed 96 well clear plate. The plate was incubated at 23°C for the indicated time.
Capsidiol was purified from Nicotiana tabacum as previously reported (Matsukawa et al., 2013 (link)) and synthesized rishitin (Murai et al., 1975 (link)) was provided by former Prof. Akira Murai (Hokkaido University, Japan). Resveratrol and brassinin were obtained from Sigma-Aldrich (Burlington, MA, USA). Glyceollin (glyceollin I) was obtained from Wako pure chemical (Osaka, Japan). Medicarpin was obtained from MedChemExpress (Monmouth Junction, NJ, USA).
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9

Morphological Analysis of Lepidoptera Species

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We examined the morphology of 17 dried and pinned specimens belonging to P.ivani (nine specimens) and P.caraganella (eight specimens). The adults of both species were photographed with Leica digital microscope DMS1000 and the incorporated digital camera and processed using the stacking system software Leica Application Suite LAS X. Genitalia were dissected from five P.ivani and four P.caraganella moths (Suppl. material 2: Table S2) and their photographs were taken with Sony Nex3 Camera from Carl Zeiss Stemi DV4 Stereo Microscope. Leaf mines were photographed in the field and in the laboratory using a digital camera Sony Nex3. All images were edited in Adobe Photoshop CS5 Extended.
Genitalia dissection and slide mounting followed Robinson (1976) . Terminology of the genitalia followed Klots (1970) and Kristensen (2003) (link).
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10

Embryonic Tibiae RNA Extraction and qPCR

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The whole tibiae were carefully dissected from E15.5 embryos under a Zeiss Stemi DV4 Stereo microscope. All surrounding connective tissues including perichondrium were removed. Total RNA was extracted using RNeasy kit (Qiagen) and subjected to real-time PCR analysis using TaqMan assays (Applied Biosystems) as described previously(4 (link)). Each reaction was performed in triplicate and repeated on at least three independent samples per genotype.
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