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34 protocols using d luciferin potassium salt

1

Circadian Monitoring of Synchronized hESCs

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Human ES cell‐derived cardiac cells were differentiated for up to 45 days and transduced with lentiviral reporters at described time points after synchronization with 100 nM dexamethasone 47 for 2 h. Subsequently, medium was changed to recording medium [BPEL, 10 mM HEPES, 100 μM D‐Luciferin Potassium Salt (Promega)]. Human ES cells were cultured in E8 medium and synchronized for 2 h with forskolin 39. Forskolin was chosen as a synchronizing agent for human ES cells, since dexamethasone has been implemented in multiple stem cell differentiation protocols and might therefore induce premature differentiation 73, 74, 75, 76, 77, 78. Subsequently, medium was changed to ES recording medium (E8, 10 mM HEPES, 100 μM D‐Luciferin Potassium Salt (Promega)). Culture dishes were sealed with high vacuum grease (Dow Corning) and monitored via the use of a LumiCycle32 device (Actimetrics) at 37°C. Bioluminescence from each dish was continuously recorded (integrated signal of 70 s with intervals of 10 min). Raw data (counts/s) were baseline subtracted (polynomial order 3).
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2

Bioluminescence Imaging of Tumor Growth

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Tumor growth was monitored weekly using the IVIS Spectrum In Vivo Imaging System (PerkinElmer). Briefly, mice were injected subcutaneously with 75 mg/kg D-luciferin potassium salt (Promega E1605) in sterile PBS and anesthetized with 2% isoflurane in medical air. Serial bioluminescence images were acquired using the automated exposure setup. The peak bioluminescence signal intensity within selected regions of interest (ROIs) was quantified using the Living Image Software (PerkinElmer) and expressed as photon flux (p/s/cm2/sr). Representative planar bioluminescence images were displayed with indicated adjusted minimal and maximal thresholds.
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3

In Vivo Bioluminescence Imaging of Hindlimb Muscles

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For in vivo bioluminescence imaging (BLI), mice were first anesthetized with 1.5% of isoflurane (Iso-Vet®, 100 mg/ml, Piramal Healthcare, London, UK) in 100% oxygen (flow rate of 2 L/min) and then given a single intravenous injection containing d-luciferin potassium salt (Promega, WI, USA) dissolved in PBS (126 mg/kg, 10 µL/g). Ten minutes after luciferin injection, mice were placed in the imaging chamber (IVIS® Spectrum, Perkin-Elmer, MA, USA). Next, consecutive frames were acquired for 60 seconds until the maximum signal intensity was reached. After drawing a region of interest (ROI) around the hindlimb muscles, the maximal radiance (p/s/cm2/sr) was measured within this region, and subsequent images were analyzed using Living Image® version 4.5 (Caliper Life Sciences, MA, USA). BLI data were obtained 1h, 1,3,7,14, and 21 days post injections. Mice were euthanized by cervical dislocation immediately after in vivo BLI and the hindlimb muscles were collected in OCT (Sakura Finetek).
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4

Orthotopic Mouse Renal Tumor Model

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All experiments were approved by the Animal Ethics Committee of the University of Tokyo. The housing and handling conditions of the mice were consistent with the method above. Mouse renal orthotopic tumor models were conducted as previously described [22 (link), 29 (link)]. Briefly, BALB/c‐nu/nu male mice (5 weeks old) were purchased from Sankyo Labo Service Corporation (Tokyo, Japan). ccRCC cells (1.0 × 105) expressing Luc2 and mCherry were inoculated into the subrenal capsule of mice. For in vivo bioluminescence imaging, D‐luciferin potassium salt (200 mg·kg−1; Promega) was diluted in PBS and injected into mice intraperitoneally. For ex vivo bioluminescence imaging, the harvested kidneys and lungs were reacted with d‐luciferin potassium solution for 10 min, and images were captured using NightOWL LB981 (Berthold Technologies, Bad Wildbad, Germany). Quantitative analysis was conducted using the IndiGO software (Berthold Technologies). Everolimus was reconstituted in saline solution (Otsuka, Tokyo, Japan) containing 5% Tween20 and 30% propylene glycol (Sigma‐Aldrich) and administered to mice (2.5 mg·kg−1) thrice weekly.
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5

Bioluminescent Imaging of Chondrogenic Differentiation

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3 to 6 cell pellets were randomly selected for bioluminescent imaging (BLI) on Days 3, 6, 10, 12, 14, 16, 18, 20 and 26, using an IVIS spectrum imager (PerkinElmer, CA). The selected pellets were removed from initial 96-well plate and placed in a new 96-well, clear bottom black plate (BD Life Sciences) to monitor BLI signal during chondrogenesis from the reporters transfected into MSCs. During each imaging session, the substrate D-luciferin potassium salt from Promega (Madison, WI) was added to the wells containing pellets. Imaging was done at 1, 5, 10 and 15 min after the addition of D-luciferin, each with 1 min exposure. The 10 min time point was chosen when the BLI signals seemed to be stabilized and thus suitable for quantification across all days and for all pellets for consistency (see supplementary materials). After imaging, half of the pellets were saved for RNA extraction and subsequent real-time quantitative PCR (qRT-PCR) analysis of miR-145-5p and Sox9 expression, and the other half for histology analysis described below.
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6

In vivo Bioluminescence Imaging of Liver Clock Gene

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Clock gene expression (PER2::LUC bioluminescence) was analyzed in vivo in a subset of 4 males and 4 females from cohort 1 to confirm food entrainment of peripheral clocks. After 2 weeks of TRF, bioluminescence from the liver was measured 10h and 22h after lights-on (zeitgeber times (ZT) 10 and 22; lights-on at ZT0) as previously described (Xie et al., 2020 (link)). Briefly, mice were lightly anesthetized with isoflurane and injected s.c. with D-luciferin potassium salt (15 mg/kg, Promega, Madison, WI) in sterile phosphate-buffered saline. After shaving fur from over the liver and throat, images were captured 10 minutes after injection using an Electron Magnified (EM) CCD camera (ImageEM, Hamamatsu, Japan, controlled by Piper software version 2.6.89.18, Stanford Photonics, Stanford, CA) connected to an ONYX dark box (Stanford Photonics). Bioluminescence from circular regions of interest over each tissue was quantified using ImageJ (NIH) (Tahara et al., 2012 (link); Swamy et al., 2018 (link)).
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7

Rhythmic PER2 Expression in MEFs

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The rhythmic expression of PER2 was measured by using a real-time LUC assay in mouse embryonic fibroblasts (MEFs) derived from PER2::LUC knock-in mice24 (link). Bioluminescence was monitored once per minute over 10-min intervals with a dish-type luminometer (LumiCycle; Actimetrics, Wilmette, IL, USA). Cell lines were stimulated with 200 nM dexamethasone for 2 h to synchronize PER2 expression rhythms. The medium was replaced with DMEM containing 0.1 mM D-luciferin potassium salt (Promega, Madison, WI, USA), 10% FBS (Bio West, Kansas City, MO, USA) and the specified treatment before measurements were taken. For transient l-ornithine treatment, MEFs were treated with vehicle (water) or l-ornithine (1 mM) for 30 min at 36 h, 37 h, 43 h or 51 h after dexamethasone stimulation. After l-ornithine treatment, the l-ornithine-containing culture medium was replaced with fresh medium, and bioluminescence was measured over 4 days. The phase and amplitude of the second peak after treatment were recorded for analysis.
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8

Quantifying Tumor Burden via Bioluminescence

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The tumour burden was quantified using whole-body in vivo bioluminescence imaging with a NightOWL LB981 system (Berthold Technologies). Mice were intraperitoneally injected with 2.5 mg of D-luciferin potassium salt (Promega) dissolved in 0.2 mL of PBS. Images were acquired beginning 10 min after D-luciferin injection. Regions of interest (ROIs) were drawn around the whole body. The photons emitted from the ROIs was quantified in units of photons per second using the IndiGO software (Berthold Technologies).
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9

Bioluminescent Imaging of Mice

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After the mice were anesthetized with avertin, D-luciferin potassium salt was injected (200 mg/kg in PBS, i.p.; Promega). Ten to fifteen minutes after luciferin injection, intensity of the bioluminescence signal was measured for 1–60 s once a week using the Night OWL II LB983 system (Berthold Technologies). Imaging analyses were performed with the IndiGO2 software (Berthold Technologies). All values are shown as photons per second.
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10

Bioluminescent Tumor Imaging in Mice

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Tumor growth was monitored weekly using the IVIS Spectrum In Vivo Imaging System (PerkinElmer). Briefly, mice were injected subcutaneously with 75 mg/kg D-luciferin potassium salt (Promega, E1605) in sterile PBS and anesthetized with 2% isoflurane in medical air. Serial bioluminescence images were acquired using the automated exposure set-up. The peak bioluminescence signal intensity within selected regions of interest (ROI) was quantified using the Living Image Software (PerkinElmer), and expressed as photon flux (p/sec/cm2/sr). Representative planar bioluminescence images were displayed with indicated adjusted minimal and maximal thresholds.
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