The largest database of trusted experimental protocols

26 protocols using hp6890n

1

Rumen SCFA and Metabolite Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Rumen SCFA concentrations were determined using a gas chromatograph (HP6890N, Agilent Technologies, Wilmington, DE, United States) as described by Yang et al. (2012) (link). Rumen Ni concentration was determined in the supernatant of a 10 ml rumen fluid sample (centrifugation at 900 × g for 5 min) with the atomic absorption spectrometry fitted with a nickel hollow cathode lamp according to the method described by Rahnama and Najafi (2016) . Concentrations of L-lactate, D-lactate, and ammonia, and urease activity were determined by using the L-Lactate Assay Kit, D-Lactate Assay Kit, Ammonia Assay Kit, and Urease Activity Assay Kit (ab65331, ab83429, ab83360, and ab204697, Abcam Trading Co., Ltd., Shanghai, China), respectively, and a microplate reader (Infinite M200 PRO, Tecan Trading AG, Switzerland). SPSS V21.0 (SPSS Inc., Chicago, IL, United States) was applied for statistical comparison using the two-tailed t-test. Differences were considered significant when P < 0.05 in the two-tailed t-test.
+ Open protocol
+ Expand
2

Quantitative Analysis of Rumen Volatile Fatty Acids

Check if the same lab product or an alternative is used in the 5 most similar protocols
VFAs were determined by gas chromatography (HP6890N, Agilent Technologies, Wilmington, DE, USA) with 2-ethylbutyric acid (2EB) as the internal standard. The rumen content samples were treated with reference to the method proposed by Liu et al. [8 (link)]. After the samples were centrifuged at 5000 rpm for 10 min, 1 mL of supernatant was added into a 1.5 mL centrifuge tube, and then 0.2 mL of 25% metaphosphate deproteinization solution (containing 2 g/L of internal standard 2EB) was added, mixed well, and centrifuged at 8000 rpm for 10 min. The supernatant was sucked up with a disposable syringe, and then filtered into a 2 mL brown sample bottle using an organic phase filter nozzle with a 0.22 μm tip, and stored at −20 °C. The supernatant was sucked up with a disposable syringe, put on a 0.22 μm organic phase filter tip, filtered into a 2 mL brown sample bottle, and stored at −20 °C for determination. Column: HP19091N-213 capillary column (Agilent, USA). Chromatographic conditions: the detector temperature of the gas chromatograph was 280 °C, the temperature of the injection port was 250 °C, and the temperature of the column was programmed to increase as follows: the temperature was kept at 60 °C for 2 min, then increased to 140 °C at 10 °C/min without retention, and then increased to 170 °C at 3 °C/min.
+ Open protocol
+ Expand
3

Quantitative GC-FID Analysis of Leaf Extracts

Check if the same lab product or an alternative is used in the 5 most similar protocols
GC-FID and quantitative analysis were performed according to previously published method [38 (link)]. GC-FID (HP-6890N, Agilent, USA) equipped with a HP-5 fused silica capillary column (30.0 m × 0.32 mm ID × 0.25 μm) was used. The temperature programmed was 100°C held for 1 minute and then ramped to 275°C at 10°C/min and held for 17 minutes at 275°C. The injection temperature was 275°C. The flow rate of the carrier gas (helium) was 1 mL/min. A split ratio of 50 : 1 was used. A quantity of 5 μL of leaf extract and standards was injected. The chromatographic data were recorded and processed using Agilent Cerity QA-QC software.
+ Open protocol
+ Expand
4

Determination of Rumen SCFA Levels

Check if the same lab product or an alternative is used in the 5 most similar protocols
The concentrations of ruminal SCFAs were determined by using a gas chromatograph (HP6890N, Agilent Technologies, Wilmington, DE, USA) according to the description of Yang et al. [37 (link)]. A two-tailed t-test was used in the analysis of rumen SCFA concentrations and rumen pH. Differences were considered significant when p < 0.05. These analyses were performed by using SPSS software package (SPSS Inc., Chicago, IL, USA).
+ Open protocol
+ Expand
5

Quantification of Rumen Fermentation Metabolites

Check if the same lab product or an alternative is used in the 5 most similar protocols
The concentrations of ruminal SCFA were determined by means of a gas chromatograph (HP6890N, Agilent Technologies, Wilmington, DE, USA) as described by Yang et al. (2012) (link). The concentrations of L-lactate, D-lactate and ammonia nitrogen were determined with L-Lactate, D-Lactate, and Ammonia Assay Kits (ab65331, ab83429, and ab83360, Abcam Trading Company Ltd, Shanghai, China), respectively, and a microplate reader (Infinite M200 PRO, Tecan Trading AG, Switzerland).
+ Open protocol
+ Expand
6

Goat Rumen pH, SCFA, and Osmolarity Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
On day 29, all goats were slaughtered at 6 h after receiving the morning feed. Ruminal content (30 mL) were strained through a 4-layer cheesecloth and immediately subjected to pH measurement by using a pH meter (Mettler-Toledo Delta 320, Halstead, United Kingdom). A 5% HgCl2 solution was added to the fluid samples, which were subsequently stored at −20°C for the determination of SCFA concentration and osmolarity. Rumen tissue from the ventral blind sac was quickly excised and washed in ice-cold phosphate-buffered saline (PBS; pH 7.4). The epithelium was subsequently separated from the muscle layers and cut into 1–2 cm2 pieces. For each animal, five pieces of rumen epithelium were immediately fixed in 4% paraformaldehyde (PFA) (Sigma, St. Louis, MO, 123 United States) for morphometric analyses. Ten pieces were stored at −20°C for the later extraction of microbial DNA. Ten pieces were stored at −80°C for the later extraction of epithelial RNA.
Ruminal SCFAs concentrations were measured by using a gas chromatograph (HP6890N, Agilent Technologies, Wilmington, DE) as described by Yang et al. (2012) (link). 10 mL of rumen fluid was centrifuged at 18,000 g for 20 min at 4°C (Eppendorf Centrifuge 5424 R, Eppendorf AG, Hamburg, Germany). The supernatant was collected and the osmolarity was measured by using an osmometer (Osmomat 030-D, GONOTEC Berlin, Germany).
+ Open protocol
+ Expand
7

Rumen Metabolite Analysis by Spectrophotometry

Check if the same lab product or an alternative is used in the 5 most similar protocols
Determination of ammonia nitrogen by spectrophotometer colorimetric method [16 (link)]. Instantly measured rumen pH with a portable pH meter (Model PHB-4, Shanghai Leica Scientific Instrument Co., Ltd., Shanghai, China). Volatile fatty acid (VFA) concentrations were determined as described previously [17 (link)]. In brief, 2 mL of thawed rumen content was centrifuged at 5400 rpm at 4 °C for 10 min, and then 0.2 mL of 25% metaphosphoric acid was added to 1 mL of the supernatant for homogenization. The mixed solution was centrifuged at 10,000 rpm for 10 min at 4 °C, and VFAs (acetate, propionate and butyrate) were determined by a gas chromatograph (HP6890N, Agilent Technologies, Wilmington, DE, USA) equipped with an AT-FFAP capillary column (50 m × 0.32 mm × 0.25 µm). The column temperature was held at 60 °C for 1 min, then ramped unrestricted at 5 °C/min to 115 °C, then to 180 °C at 15 °C/min.
+ Open protocol
+ Expand
8

Gas Chromatographic Analysis of THMs and HAAs

Check if the same lab product or an alternative is used in the 5 most similar protocols
THMs and nine HAAs (HAA9) were analyzed using a gas chromatograph (Agilent HP 6890N) outfitted with a 63Ni electron capture detector (ECD), an auto-sampler and a Supelco EquityTM-5 column (30 m × 0.25 mm ID). The instrument operating conditions were set according to our previous work [9 (link)]. Three replications of THM and HAA9 measurements were performed for each sample.
Four THM compounds, namely chloroform (CHCl3), bromodichloromethane (CHBrCl2), dibromochloromethane (CHBr2Cl) and bromoform (CHBr3), were monitored in this study. The THMs were extracted with hexane in accordance with Standard Method 6232B [24 ].
The HAA9 compounds, namely monochloroacetic acid (MCAA), mono bromoacetic acid (MBAA), dichloroacetic acid (DCAA), bromochloroacetic acid (BCAA), trichloroacetic acid (TCAA), bromodichloroacetic acid (BDCAA), dibromoacetic acid (DBAA), chlorodibromoacetic acid (CDBAA) and tribromoacetic acid (TBAA), were quantified according to the United States Environmental Protection Agency (USPEA) Method 552.2 [25 ].
+ Open protocol
+ Expand
9

Monitoring Biogas Production and Composition

Check if the same lab product or an alternative is used in the 5 most similar protocols
The biogas production of the CSTR reactor was monitored and recorded daily using the water displacement method. The biogas will then be collected in a Tedlar bag, and the biogas composition was analyzed using a gas chromatograph (HP 6890 N) (Agilent, Santa Clara, CA 95051, United States) equipped with a thermal conductivity detector (TCD) (Agilent, Santa Clara, CA 95051, United States). The column used was HP Molesieve (Agilent Technologies, Santa Clara, CA, United States) of 30 m length × 0.5 mm ID × 40 μm film thickness capillary column. The splitless inlet, oven, and TCD detector temperatures will be kept at 60°C, 70°C, and 200°C. Argon was used as the carrier gas, while nitrogen was used as the makeup gas.
+ Open protocol
+ Expand
10

Fatty Acid Profiling of Microorganisms

Check if the same lab product or an alternative is used in the 5 most similar protocols
~40000 L4 stage animals were washed off the plates with water, rinsed five times and the pellet was frozen at −80°C. Fatty acid methyl esters (FAME) we re prepared as described (Miquel and Browse, 1992 (link)). In brief, 1 ml of 2.5% (v/v) H2SO4 in methanol was added to the pellets and samples were heated at 80°C for 1 h and cooled to room temperature foll owing by addition of 1.5 ml of 0.9% NaCl. FAME were extracted into organic phase with 1 ml of hexane after shaking and spinning down at low speed. GC of FAME was performed on a HP6890N (Agilent) apparatus equipped with a DB-23 column (30 m × 250 μm × 0.25 μm). Each experiment was repeated at least three times.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!