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10 protocols using anti cd16 apc

1

Analyzing NK Cell Subsets in Peripheral Blood

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Reduction in CD16CD56bright NK cells has been suggested as one of the mechanisms of decreased NKA.19 (link) Thus, we assessed CD16+CD56dim/CD16CD56bright NK cell subset ratio for some subjects of this study to investigate whether altered NKA is attributable to change of this ratio. The first 20 subjects from each group were selected and their NK cell subset distributions were analyzed using flow cytometry. A 5-mL sample of whole blood was collected in a heparin tube and diluted with PBS in a 1:1 ratio. PBMCs were isolated by centrifugation from the diluted whole blood and overlaid on Histopaque®1077 (Sigma-Aldrich, Darmstadt, Germany) in a conical tube. These collected PBMCs were washed and resuspended in staining buffer. PBMCs were stained with Alexa Fluor488-anti-CD56, APC-anti-CD16, and PE-anti-CD3 fluorochrome-conjugated monoclonal antibodies (BD Biosciences, Seoul, Korea). After the reaction was completed, the mixture was transferred to a conical tube and analyzed by BD FACSCalibur™ (BD Biosciences). CD16+CD56dim and CD16CD56bright NK cells were gated from CD3CD56+ cell population and the ratio of CD16+CD56dim/CD16CD56bright was determined.
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2

Characterizing Lymphocyte Subsets in Liver Transplant Recipients

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The following reagents were all obtained from BD Biosciences: FITC-anti-CD3, CY5.5-anti-CD4, CY5.5-anti-CD8, PE-anti-CD19, APC-anti-CD16, PE-anti-CD56, PE-anti-CD4, FITC-anti-Lin1, PerCPCY5.5-anti-CD123, and APC-anti-CD11C. 5 mL of whole blood for ow cytometric measurement was taken from liver transplant recipients. Peripheral blood mononuclear cells (PBMC) were isolated by coll density gradient centrifugation and resuspended in phosphate-buffered saline (PBS). Then, PBMC were stained with antibodies mentioned above at 4℃ in the dark for 20 min. After that, PBMC were washed once with 2 mL PBS and resuspended in 400 µl PBS for ow cytometry analysis.
Flow cytometry was performed in NovoCyte D2060R (ACEA Biosciences Inc). NovoEXpress software (San Diego, CA, USA) was used for analysis. The lymphocytes evaluated were T (CD3 + ), TCD4 (CD3 + CD4 + ), TCD8 (CD3 + CD8 + ), B (CD19 + ), NK (CD56 + CD16 + ), NKT (CD3 + CD56 + CD16 + ) and DC (lin1 -CD11c + and lin1 -CD123 + ). Flow cytometry characterization of circulating lymphocyte subsets was presented in Suppl Fig. 1.
The absolute numbers of lymphocyte subsets were calculated using the percentages obtained in ow cytometry and the lymphocyte counts obtained in routine blood tests on the same day.
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3

Quantifying NK Cell-Mediated Cytotoxicity

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We used a modified ELISA-based protocol for detection of CD107a as a surrogate marker of NK cell–mediated cytolysis[40 (link)]. This assay has previously been shown to be associated with FcγRIIIa binding capacity of antigen-specific antibodies[41 , 42 (link)]. A 96-well plate was coated overnight at 4°C with 150ng of recombinant protein per well,. 2% BSA blocked plates were used as antigen controls. The next day the plates were washed 6 times with PBS, 50μl of plasma (diluted 1:100) was added to each well, and incubated at 37°C for 2 hours. HIV negative plasma samples or media alone were used as negative controls, while HIVIG (pooled HIV Immunoglobulin G, NIH AIDS Reagents Program) was used as a positive control. The plates were washed and 5 × 104 NK cells enriched via negative selection from healthy blood donors (RosetteSep, Stemcell Technologies,) were added to each well in the presence of Brefeldin A (Biolegend), Golgi stop, and anti-CD107a-PE-Cy5 (BD Biosciences). The plate was incubated for 5 hours at 37°C and 5% CO2. Following incubation, cells were stained with anti-CD3-AF700, anti-CD56-PE-Cy7, anti-CD16-APC (BD), fixed with Perm A, permeabilized using Perm B (Invitrogen), and stained with anti-IFNγ-APC and anti-MIP1β-PE (BD). The cells were then fixed with 2% paraformaldehyde and analyzed by flow cytometry (gating strategy shown in Supp Figure 2).
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4

Purification and Characterization of Primitive Blood Cell Populations

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CD34+ cells from ABM and UCB were enriched using the Human CD34 Progenitor Cell Isolation Kit (Miltenyi Biotec) according to manufacturer instructions and our previous reports [9 (link)]. After staining with PE-conjugated antilineage markers (CD3, CD8, TCR, CD56, CD14, CD11b, CD20, CD19, and CD235a), anti-CD34-APC, anti-CD38-FITC, and anti-CD45RA-PE-TxR conjugated antibodies, primitive cell populations were highly purified by multicolor flow cytometry using a FACSAria sorter (BD Biosciences). Hematopoietic stem cells (HSC) were separated as LinCD34+CD38CD45RA, while multipotent progenitors (MPP) were sorted as LinCD34+CD38+CD45RA, and early lymphoid progenitors (ELP) as LinCD34+CD38+CD45RA+, as described [9 (link)]. Upon harvesting from culture, anti-CD56-PE, anti-CD11c-FITC, and anti-CD16-APC (BD Biosciences) were used to evaluate innate cell production in lymphoid lineage conditions. NK cells were identified by flow cytometry in a FACSCanto II equipment (BD Biosciences) as CD56+CD11c+ or CD56+CD16+CD11c+ cells, while dendritic cells (DC) were detected as CD56CD11c+. Analysis of flow cytometry data was performed using the FlowJo 10 software (TreeStar Inc., USA).
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5

Quantifying immune cells in COVID-19

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Samples of EDTA anticoagulated peripheral blood (2 mL) were collected from patients with COVID-19 before initial treatment. All samples were tested within 6 h of being obtained. Briefly, multiple-color flow cytometry was used to measure the CD3+/CD4+/CD8+ T-cell, CD19 + B-cell, and CD16 + CD56 + NK-cell counts (cells/μL) by human monoclonal anti-CD3-fluorescein isothiocyanate (FITC), anti-CD4-phycoerythrin (PE), anti- CD8-allophycocyanin (APC), anti-CD19-PE, anti-CD16-APC, and anti-CD56-PE antibodies (BD Multitest) according to the manufacturer’s instructions. The cells were analyzed on a BD FACS Canto II flow cytometry system (BD Biosciences).
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Comprehensive Immune Profile Assessment

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Cellular immunity was assessed by multicolor flow cytometric determination of surface markers using human monoclonal anti-CD3-fluorescein isothiocyanate (FITC), anti-CD4-phycoerythrin (PE), anti-CD8-allophycocyanin (APC), anti-CD19-PE, anti-CD16-APC, and anti-CD56-PE antibodies (BD Multitest), for determination of proportions and numbers of total T (CD3+), helper T (Th, CD3+CD4+), cytotoxic T (Tc, CD3+CD8+), Natural Killer (NK, CD3-CD16+CD56+), and B (CD3-CD19+) cell subsets. All samples were examined by a BD FACSCanto II Flow Cytometer. Data were analyzed by FlowJo v10.0.
Serum levels of C reactive protein (hypersensitive, hsCRP), immunoglobulin (IgG, IgM, IgA, and IgE), and complements (C3, C4) were detected by rate nephelometry immunoassay (N Antiserum to Human Ig Kit series, Siemens, Germany). The plasma levels of cytokines (IL-2, IL-4, IL-6, IL-10, TNF-α, and IFN-γ) were detected by Cytometric Bead Array using the human Th1/2 cytokine kit II (BD Ltd., USA). All tests were conducted according to the manufacturer's instructions.
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7

COVID-19 Lymphocyte Subset Analysis

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Lymphocyte subset percentages were analyzed before initial treatment. EDTA anticoagulated peripheral blood (2 ml) were collected from patients with COVID-19 on admission (18 (link)). All samples were tested within 6 h of being obtained. Briefly, CD3+ total T-lymphocytes, CD19+ B-cell, CD3+/CD4+/CD8+ T-cell, and CD16+CD56+ NK-cell counts (cells/μl) were measured by multiple-color flow cytometry with human monoclonal anti-CD19-PE, anti-CD3-fluorescein isothiocyanate (FITC), anti-CD4-phycoerythrin (PE), anti-CD8-allophycocyanin (APC), anti-CD16-APC, and anti-CD56-PE antibodies (BD Multitest) according to the manufacturer's instructions. The cells were analyzed on a Partec Cube 6 Flow cytometry system (Sysmex Europe GmbH, Germany).
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8

Lymphocyte Subset Analysis in Gastric Cancer

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Peripheral blood samples (two mL) were collected from 51 GC patients and 50 healthy individuals in EDTA anticoagulant tubes. The lymphocyte subsets, including CD3+, CD4+, CD8+ T cells, CD19+ B cells, and CD16+ CD56+ NK cells, were quantified in cells/µL using a six-color flow cytometry assay. Human monoclonal antibodies, including anti-CD3-fluorescein isothiocyanate (FITC), anti-CD4-phycoerythrin (PE), anti-CD8-allophycocyanin (APC), anti-CD19-PE, anti-CD16-APC, and anti-CD56-PE (BD Multitest), were used according to the manufacturer’s instructions. The cell samples were analyzed on a BD Canto II flow cytometry system (BD Biosciences, East Rutherford, NJ, USA).
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9

Multiparametric Flow Cytometry Analysis

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Antibodies anti-CD14-FITC, anti-CD16-APC, anti-CD56-PE, anti-CD3-APC, anti-CD4-FITC, anti-CD8-PE, and anti-CD19-PE were purchased from BD Biosciences (Heidelberg, Germany). The Luminex assay kit was purchased from Bio-Rad company (Hercules, CA, USA).
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10

Multiparameter Flow Cytometry of Immune Cell Markers

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The following antibodies were used: anti CD14-BV510, anti CD3–BV421 and anti CD56–PECy7 from BD Biosciences; anti CD300lf-PE from BD Biosciences or anti CD55-APC from Biolegend; anti CD16-APC from BD Biosciences or anti CD16-FITC from Beckman Coulter (Miami, FL) and PE Mouse IgG1, κ Isotype Control from BD Biosciences or APC Mouse IgG1, κ Isotype Control from R&D System. Red blood cell lysis was performed using Versalyse lysing solution (Beckman Coulter). CD300LF and CD55 expression were measured using Navios flow cytometer (Beckman-Coulter). Results were analyzed with Kaluza software (Beckman-Coulter) expressed as Medians of Fluorescence Intensity (MFI).
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