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17 protocols using 300 mesh carbon coated copper grid

1

Nanoparticle Morphological Characterization Protocol

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The morphological examinations of the nanoparticles were performed as we described previously [23 ,24 (link)], using a transmission electron microscope (Phillips-TECNAI 12 BIOTWIN EM Microscope, FEI Company, Hillsboro, OR) at an acceleration voltage of 80 kV. The TEM sample was prepared by depositing 0.5 mL of the nanoparticle suspension (1.0 mg/mL) onto a 300-mesh carbon-coated copper grid (Electron Microscopy Sciences, PA, USA) that had been previously hydrophilized under UV light (Electron Microscopy Sciences, Hatfield, PA). The samples were blotted away after 20 min of incubation, and the grids were negatively stained for 5 min at room temperature with freshly prepared and sterile-filtered 2% (w/v) uranyl acetate aqueous solution (Electron Microscopy Sciences, PA, USA). Then, the grids were washed twice with distilled water and air-dried prior to imaging.
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2

Phage Isolation and Characterization by TEM

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Phage particles were sedimented via centrifugation (20,800× g, 90 min, 4 °C), and the pellet was further washed in 0.1 M acetate ammonium buffer by repeating the centrifugation step. Subsequently, phage suspensions were dried on a 300-mesh carbon-coated copper grid (Electron Microscopy Sciences, Hatfield, PA, USA) for 2 min, and excess solution was removed using filter paper. The grids were negatively stained with 2% uranyl acetate for 30 s. The grids were air-dried and then imaged via TEM using a JEOL 1400+ microscope operated at 100 kV. Phage sizes were calculated from 20 independent measurements of separated virions using the image processing software Fiji (Version 1.54f), and they are reported as a mean value ± SD.
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3

Transmission Electron Microscopy Gel Sample Preparation

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TEM samples
were prepared using 5 mg/mL gels. Approximately 10 μL of gel
was placed on the shiny side of a non-glow-discharged 300-mesh carbon-coated
copper grid (Electron Microscopy Sciences, Hatfield, PA) and allowed
to adsorb for 2 min. Excess gel and water were wicked away using filter
paper, and the grid was placed shiny side down on top of a 10 μL
drop of DI water for 30 s to wash away any salts. After wicking the
washing water with filter paper, grids were placed shiny side down
on top of a 10 μL drop of 4% uranyl acetate in water for 1 min.
Finally, the uranyl acetate solution was wicked away using filter
paper, and the grids were allowed to dry completely before imaging.
Samples were imaged on the nanometer scale using a FEI Tecnai instrument
with an acceleration voltage of 80 kV, and the AMT Advantage HR 1kX1k
digital camera associated with the instrument was used to produce
digital micrographs.
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4

TEM Characterization of GBM Extracellular Vesicles

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To further characterize the EV obtained from GBM neurospheres and to confirm their ultrastructural morphology, transmission electron microscopy (TEM) was performed on EV. After collection, EV were resuspended and diluited in PBS and, according to proper dilutions, the samples were adsorbed onto 300-mesh carbon-coated copper grids (Electron Microscopy Sciences) for 5 min in a humidified chamber at room temperature. EV on grids were fixed in 2% glutaraldehyde (Electron Microscopy Sciences) in PBS for 10 min and then briefly rinsed in Milli-Qwater. Grids with adhered EV were examined with a Zeiss Gemini SEM 500 equipped with a STEM detector at 20 kV and at a 3.0 mm working distance, after negative staining with 2% phosphotungstic acid, brought to pH 7.0 with NaOH [62 (link)].
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5

Transmission Electron Microscopy of EVs

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A suspension of EVs (~50 × 109/ml) was diluted in phosphate-buffered saline (1:10), and 1.5 μl of the suspension was placed on 300 mesh carbon-coated copper grids (Electron Microscopy Science, Hatfield, PA, USA) at room temperature. Five minutes later, excess liquid in grids was blotted with a filter paper, rinsed twice with drops of distilled water and the grids were stained by continuously dripping 150 μl of 0.5% uranyl acetate onto them while tilted at a 45° angle. The excess liquid was blotted, and the grids were air-dried at room temperature for 10 minutes. The images were collected using an FEI Morgagni 268 transmission electron microscope equipped with a MegaView III CCD camera. hiPSC NSC-EV diameters were determined using the “Analyze” tool in the ImageJ software as an average of the measured diameters along four different axes (x, y, x + 45°, y + 45°).
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6

Transmission Electron Microscopy of Phage

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Aliquots (3 μL) of the peak procapsid-containing fractions and phage fractions from the sucrose gradients of the cell lysates (prepared above, Section 2.4) were adsorbed onto 300-mesh carbon-coated copper grids (Electron Microscopy Sciences, Hatfield, PA, USA) for 1 min at room temperature (~22 °C). The grids were washed with distilled water and stained with 1% uranyl acetate for 30 s at room temperature. The grids were blotted to remove excess stain and visualized in a FEI TecnaiG2 Spirit BioTWIN TEM at 68,000× magnification and 80 kV.
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7

Visualizing Extracellular Vesicle Ultrastructure

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Transmission electron microscopy (TEM) was performed on isolated EVs and resuspended in PBS to analyze their ultrastructural morphology. According to proper dilutions, the samples were adsorbed to 300 mesh carbon-coated copper grids (Electron Microscopy Sciences) for 5 min. in a humidified chamber at room temperature. The EVs on grids were then fixed in 2% glutaraldehyde (Electron Microscopy Sciences) in PBS for 10 min. and then briefly rinsed in Milli-Qwater. The grids with adhered EVs were examined with a Zeiss Gemini SEM 500 equipped with a STEM detector at 20 kV and at a 3.0 mm working distance, after negative staining with 2% phosphotungstic acid, brought to pH 7.0 with NaOH [51 (link)].
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8

Negative Staining Electron Microscopy of Tau Fibrils

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Negative staining electron microscopy was performed on tau fibrils. 2 μL of tau fibrils (1 mg/mL) were applied to 300 mesh carbon coated copper grids (Electron Microscopy Sciences, Hatfield, PA) and were allowed to settle for 10 min. Grids were washed with filtered PBS. 1% uranyl acetate was filtered through a 2-micron filter and applied to each grid that were then dried. Samples were examined with a FEI Tecnai G2 Spirit Twin TEM (FEI Corp., Hillsboro, OR) operated at 120 kV and digital images were acquired with a Gatan UltraScan 2 k × 2 k camera and Digital Micrograph software (Gatan Inc., Pleasanton, CA).
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9

Electron Microscopy Sample Preparation

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Electron microscopy samples were prepared by applying 3 μL of formaldehyde cross-linked or untreated samples at 1 mg/mL onto 300-mesh carbon-coated copper grids (Electron Microscopy Sciences, Hatfield, PA, USA). The grids were stained for 30 s with 1% uranyl acetate and visualized by a FEI Tecnai G2 Spirit BioTwin Transmission Electron Microscope equipped with an AMT 2k XR40 CCD camera at 68,000× magnification.
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10

Ultrastructural Analysis of Extracellular Vesicles

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Electron microscopy analysis was performed as already described [10 (link)]. Briefly, for scanning electron microscopy (SEM) the cells were fixed in PBS (Sigma-Aldrich) 2% glutaraldehyde (Sigma-Aldrich) and dehydrated with ethanol solutions. Next, samples were sputter-coated with an SCD040 Balzer Sputterer (Oerlikon Balzers, Balzers, Liechtenstein). Samples were analyzed with an SEM Philips 505 microscope (Philips, Amsterdam, Netherlands). Transmission electron microscopy was performed on concentrated EV preparations resuspended in PBS (Sigma-Aldrich) to analyze their ultrastructural morphology. According to proper dilutions, the samples were adsorbed to 300 mesh carbon-coated copper grids (Electron Microscopy Sciences) for 5 min in a humidified chamber at room temperature. EVs on grids were then fixed in 2% glutaraldehyde (Sigma-Aldrich) in PBS for 10 min and then briefly rinsed in milli-Q water. Grids with adhered EV were examined with a Philips CM 100 transmission electron microscope TEM at 80 kV, after negative staining with 2% phosphotungstic acid, brought to pH 7.0 with NaOH. Images were captured by a Kodak digital camera.
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