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5 protocols using anti rabbit igg conjugated to horseradish peroxidase

1

Western Blot Analysis of APOL1 Protein

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Whole embryo protein lysates were collected at 2 dpf by homogenizing anesthetized embryos immersed in RIPA Buffer (50 mM Tris, 150 mM NaCl, 0.1% SDS, 0.5% sodium deoxycholate, 1% Triton X 100, protease inhibitor (Roche, cat. no. 11697498001)). 100 mg protein was loaded into individual wells of a Mini-PROTEAN TGX Precast Gel (Bio-Rad) and a western blot was performed as described [59 (link)]. Blots were incubated overnight at 4°C with anti-APOL1 antibody (1:1000; Abcam, EPR2907, ab108315). The membranes were subsequently washed in PBST (0.1% Tween 20) and incubated for 1 hour at room temperature with anti-rabbit IgG conjugated to horseradish peroxidase (1:20,000; GE Healthcare, NA934V). ACTIN antibody (1:1000, Santa-Cruz, cat. no. sc-8432) was used as a loading control.
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2

Protein Expression Analysis in Keratinocytes

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Skin and keratinocytes were solubilized using lysis buffer [1% NP40, 20 mM Tris-HCl (pH 7.5), 0.15 M NaCl, 1 mM EDTA, plus phosphatase cocktails and protease inhibitor cocktails (Nacalai Tesque)]. Each sample was resolved using 10% SDS-polyacrylamide gels, transferred to PVDF membranes, and incubated overnight with anti-phospho-EGFR (Tyr1068) (D7A5) XP® rabbit monoclonal antibody (dilution ratio 1:1,000) (#3777, Cell Signaling), anti-EGFR (D38B1) XP® rabbit monoclonal antibody (dilution ratio 1:1,000) (#4267, Cell Signaling), anti-ERK1/2 (137F5) rabbit monoclonal antibody (dilution ratio 1:1,000) (#4695 S, Cell Signaling), anti-phospho-ERK1/2 (T202/Y204) (20G11) rabbit monoclonal antibody (dilution ratio 1:1,000) (#4376 S, Cell Signaling), anti-STAT3 rabbit polyclonal antibody (dilution ratio 1:1,000) (#9132 S, Cell Signaling), anti-phospho-STAT3 (Y705) rabbit polyclonal antibody (dilution ratio 1:1,000) (#9131 S, Cell Signaling), and anti-filaggrin antibody (dilution ratio 1:1,000) (#GTX37695, GeneTex). The bound antibodies were detected with anti-rabbit IgG conjugated to horseradish peroxidase (GE Healthcare). The full uncropped blot images are shown in Supplementary Fig. 1.
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3

Western Blot Analysis of DNA Repair Proteins

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Total cell extracts were prepared from exponentially growing cells and were subjected to electrophoresis in 10% SDS-polyacrylamide gel and then transferred onto a PVDF membrane. The membrane was blocked with 5% skim milk. To detect XPA, APE1, or α-tubulin, the membrane was incubated in 1:100 dilution of anti-XPA monoclonal antibody (ab2352, Abcam), 1:2000 dilution of anti-APE1 monoclonal antibody (ab194, Abcam), or 1:10000 dilution of anti-α-tubulin monoclonal antibody (ab7291, Abcam) overnight. After washing with phosphate-buffered saline containing 0.05% Tween 20, the membrane was incubated with 1:2500 dilution of anti-mouse IgG conjugated to horseradish peroxidase (GE Healthcare Bio-Sciences). To detect OGG1 or DNA polymerase β (Pol β), the membrane was incubated with 1:10000 dilution of anti-OGG1 monoclonal antibody (ab124741, Abcam) or 1:1000 dilution of anti-Pol β polyclonal antibody (ab26343, Abcam) overnight. After washing with phosphate-buffered saline containing 0.05% Tween 20, the membrane was incubated with 1:2500 dilution of anti-rabbit IgG conjugated to horseradish peroxidase (GE Healthcare Bio-Sciences). The proteins were visualized by chemiluminescence using the ECL system (GE Healthcare Bio-Sciences).
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Western Blot Analysis of XPC, CSB, and α-Tubulin

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Total cell extracts were fractioned on 10% SDS-polyacrylamide gels and subsequently transferred to PVDF membranes. Membranes were blocked with 1% BSA for XPC or 5% skim milk for CSB and α-tubulin. To detect XPC, CSB, and α-tubulin, membranes were incubated with a 1:500 dilution of anti-XPC monoclonal antibody (ab6264, Abcam), 1:200 dilution of anti-CSB polyclonal antibody (H-300, Santa Cruz), or 1:10000 dilution of anti-α-tubulin monoclonal antibody (ab7291, Abcam) overnight in Can Get Signal Solution 1 (Toyobo). After washing with phosphate-buffered saline containing 0.05% Tween 20, membranes were incubated with a 1:2500 dilution of anti-rabbit IgG conjugated to horseradish peroxidase (GE Healthcare). The chemiluminescent signal was detected using the ECL Prime Western blotting detection reagent (GE Healthcare).
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5

Lamin A Cleavage and Apoptosis

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Antisera directed against cleaved lamin A and cleaved caspase 6 were from Cell Signaling (Danvers, MA) and antibody for ZMPSTE24 was obtained from Abcam (Cambridge, MA). Anti-mouse IgG and anti-rabbit IgG conjugated to horseradish peroxidase were from GE Healthcare UK. The rat insulin ELISA kit was purchased from American Laboratory Products Co (Windham, NH). Inhibitors of caspase 3 (Z-DEVD-FMK) and caspase 6 (Z-VEID-FMK) were from Enzo Lifesciences (Farmingdale, NY). Anti-β actin, metabolic cell viability assay kit (MTT) and all other reagents employed in the current studies were from Sigma Aldrich (St. Louis, MO).
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