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Pcmv7 3xflag zeo vector

Manufactured by Merck Group

The PCMV7-3xFlag-zeo vector is a plasmid-based expression vector designed for use in mammalian cell lines. It contains a cytomegalovirus (CMV) promoter for high-level protein expression, a 3xFlag tag for detection and purification, and a zeocin resistance gene for selection of transfected cells.

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5 protocols using pcmv7 3xflag zeo vector

1

Human Polθ C-terminal Domain Expression

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Full length (7776 bp) human Polθ cDNA was obtained from Addgene plasmid Repository (plasmid #:73132). WT Polθ C-terminal domain (1708–2590) and its catalytic mutation were subcloned into pCMV7–3xFlag-zeo vector (Sigma). The vectors were transfected into GM637 HFs by Lipofectamine 2000 reagent (Invitrogen). After 24h incubation, 0.5 µg of Zeocin (GenDEPOT) were added to the culture media. After 3 days of incubation, cells were washed with PBS buffer and were continuously cultured with the media containing 250 ng of Zeocin for ~ 2 weeks. Protein expression and siRNA knock down efficiency were verified by western blot analysis (Figure S2A).
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2

Overexpression of Rev3 in Human Fibroblasts

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siRNA-resistant wild-type human Rev3, or catalytic mutant (D2781A D2783A) Rev3 cDNAs were cloned into the pCMV7-3xFlag-zeo vector (Sigma-Aldrich). The vectors were each transfected into SV40 transformed GM637 HFs by lipofectamine 2000 reagent (Invitrogen). After 24 h incubation, 0.5 μg of zeocin (GenDEPOT) was added to the culture media. After an additional 3 d of incubation, the cells were washed with PBS buffer and were continuously cultured in media containing 250 ng of zeocin for ∼2 wk. Protein expression was verified by Western blot analysis (Fig S1D).
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3

Evaluating DNA Damage Response Mechanisms

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Full-length human Polη or Polλ ORFs were cloned into the pCMV7-3xFlag-zeo vector (Sigma-Aldrich) and stably expressed into XPV HFs or GM637 HFs, respectively. For Rev7 foci formation, Rev7 antibody (BD Biosciences) was used for immunofluorescence in GM637 HFs. Cells were suspended and treated with siRNA and cultured on a coverslip in six-well plate with 50% confluence. After 48 h, cells were treated with UVC (30 J/m2). For UV irradiation, cells were washed with PBS buffer and irradiated with UVC light in the presence of PBS buffer. After irradiation, fresh growth medium was added to cells and the cells were incubated for 6 h. After washing with PBS buffer, cells were fixed with 4% paraformaldehyde for 30 min. Fixed cells were permeabilized with 0.2% Triton x-100 in PBS buffer. Primary FLAG antibody (Sigma-Aldrich) or Rev7 antibody (BD Biosciences) were added to cells in PBST (0.1% Tween 20 in PBS) containing 3% BSA. Nuclear staining was performed with DAPI (Molecular Probe) in PBS buffer for 20 min. The fluorescent images were visualized and captured by fluorescence microscopy (Nikon fluorescence microscope).
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4

Polλ CDNA Overexpression Assay

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siRNA-resistant wild-type human Polλ, or catalytic mutant (D427A D429A) Polλ, or N-terminally deleted (245–575) Polλ cDNAs were cloned into the pCMV7-3xFlag-zeo vector (Sigma-Aldrich). The vectors were each transfected into SV40-transformed GM637 HFs or Polλ−/− MEFs by lipofectamine 2000 reagent (Invitrogen). After 24 h incubation, 0.5 μg of zeocin (GenDEPOT) was added to the culture media. After an additional 3 d of incubation, the cells were washed with PBS buffer and were continuously cultured in media containing 250 ng of zeocin for ∼2 wk. Protein expression and siRNA knockdown efficiency were verified by Western blot analysis (Fig S1A–C).
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5

Overexpression of Polκ in HF cells

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Wild type and mutant Polκ genes were subcloned into pCMV7-3xFlag-zeo vector (Sigma). The vectors were transfected into normal HF (MRC5) cells by Lipofectamine 2000 reagent (Invitrogen). After 24h incubation, 0.5 μg/ml of Zeocin (Invitrogen) was added to the culture media. After 3 days of incubation, cells were washed with PBS buffer and were continuously cultured with the media containing 250 ng/ml of Zeocin for ~ 2 weeks. For checking protein expression by Western analysis, cells were washed with PBS buffer and lysed with RIPA buffer (1x PBS, 1% IP-40, 0.5% sodium deoxycholate, 0.1% SDS). After 1h incubation on ice, the cellular mixture was centrifuged and the supernatant was collected. Equivalent amounts (approximately 30 μg) of prepared cellular extracts were separated on a 10% SDS-polyacrylamide gel and transferred to a PVDF membrane (Bio-rad). The membranes were probed with affinity purified rabbit polyclonal antibodies against Polκ followed by secondary antibodies conjugated with horseradish peroxidase. The signals were detected using ECL-Plus (Amersham).
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