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2 protocols using recombinant mouse egf

1

Macrophage cell culture and transfection

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RAW264.7 macrophages were obtained from the American Type Culture Collection (#IB-71) and maintained in complete DMEM, 4.5 g/l glucose with 10% (vol/vol) heat-inactivated fetal calf serum (PAA, Austria), and 2 mM l-glutamine (PAA, Pasching, Austria). BMMs were isolated and maintained as described previously (Kasmapour et al., 2012 (link)). Cells were incubated at 37°C/5% CO2 in a humidified incubator. For IFN-γ stimulation, RAW264.7 macrophages and BMMs were stimulated with 5 ng/ml IFN-γ (Peprotech, Hamburg, Germany) for 16–20 h. Recombinant mouse EGF was from BioLegend (San Diego, CA). LysoTracker Red DND-99 was from Invitrogen. The mouse Rab20 gene was amplified by standard PCR from mouse DNA with specific primers and cloned into pEGFP-C1 and pmCherry-C1 vectors (Clontech, Carlsbad, CA). pEGFP-C1-Rab20T19N (Rab20DN) plasmid was generated by site-directed mutagenesis using a QuikChange II XL mutagenesis kit (Agilent Genomics, Santa Clara, CA). RNAi-Ready pSIREN-RetroQ-DsRed-Express vector was obtained from Clontech. EGFP-Rab5 was kindly provided by Philip D. Stahl (Washington University, St. Louis, MO), and EGFP-Rab7 and tdTomato-LAMP1 were kindly provided by Bo Van Deurs (University of Copenhagen, Copenhagen, Denmark) and Tom Carter (Medical Research Council-National Institute for Medical Research, London, United Kingdom), respectively.
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2

Generating Intestinal Organoids from Mouse Crypts

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SI organoids were derived from Hvem/− or littermate Hvem+/+ mice. The proximal SI was cut into 5-mm segments and incubated in 4°C 2 mM EDTA in PBS for 5 min and washed by pipetting. The segments were incubated in 2 mM EDTA in PBS for 30 min at 4°C, and crypts were isolated by pipetting with cold HBSS. Dissociated crypts were passed through a 70-μm cell strainer and pelleted by centrifuge at 600 rpm for 3 min at 4°C. The crypts were resuspended in Advanced DMEM/F12 medium (Thermo Fisher Scientific); the number of crypts was counted, and they were resuspended in Matrigel Growth Factor Reduced (GFR) Basement Membrane Matrix (Corning). The crypts were plated in a 24-well plate with organoid growth medium supplemented with 100 μg/ml penicillin, 100 U/ml streptomycin, 2 mM Glutamax, 1×N-2 supplement, 1×B27 supplement, 10 mM HEPES (Thermo Fisher Scientific), 1 mM N-acetylcysteine (Sigma-Aldrich), 100 ng/ml recombinant mouse Noggin (Peprotech), 50 ng/ml recombinant mouse EGF (BioLegend), 500 ng/ml recombinant human R-spondin 1 (Peprotech). Media were changed every 2 days.
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