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1260 in nity

Manufactured by Agilent Technologies
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The 1260 Infinity is a high-performance liquid chromatography (HPLC) system manufactured by Agilent Technologies. It is designed to provide reliable and consistent separation and analysis of a wide range of chemical compounds. The system features a modular design, allowing for customization to meet specific analytical requirements.

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7 protocols using 1260 in nity

1

Chemotaxonomic Analysis of Strain YIM B02564 T

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Several standard methods were applied to analyze the chemotaxonomic characteristics of strain YIM B02564 T . Biomass for fatty acid analysis was harvested from cultures grown on TSA medium at 25 ℃ for 2 days. The fatty acids were extracted using a standard MIDI protocol and identi ed by using the Sherlock Microbial Identi cation System (Sherlock version 6.1; MIDI database: TSBA6) following the manufacturer's instructions (Sasser 2001) . Determination of the cell-wall diaminopimelic acid was performed according to the method described by Staneck and Roberts (1974) . Menaquinone and polar lipids were extracted following the method described by Minnikin et al. (1984) . Menaquinone was analyzed by a reversed-phase HPLC system (Agilent Technologies 1260 In nity) with a C18 column (25 cm×4.6 mm, 5 μm). Identi cation and analysis of polar lipids were performed by a two-dimensional TLC procedure on silica gel G60 plates and then 5% molybdatophosphoric acid, 0.2% ninhydrin and molybdenum blue were used to detect the lipids, aminolipids and phospholipids, respectively.
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2

Chemotaxonomic Characterization of Microbial Biomass

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The strain biomass for chemotaxonomic characterization was obtained from 5-days old cultures grown on medium R2A with 1% NaCl at 30 °C. The isomer type of the diaminopimelic acid of the cell wall was analyzed according to the method described by Lechevalier (Lechevalier and Lechevalier 1971) . The respiratory quinones were isolated using the method of Collins et al. (1977) , and analyzed by HPLC (Agilent Technologies 1260 In nity) (Groth et al. 1996) . Polar lipids pro les were analyzed as described by two-dimensional TLC (Minnikin et al. 1984; Toru et al. 1983) , and the different spots were observed by spraying with the proper detection reagents (molybdophosphoric acid, molybdenum blue, ninhydrin, D reagent and α-naphthol). The cellular fatty acids were extracted and analyzed according to the standard MIDI protocol (Microbial Identi cation) and Sherlock Microbial Identi cation System (Sherlock version 6.1; midi database: TSBA6).
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3

Chemotaxonomic Characterization of Microbial Biomass

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The strain biomass for chemotaxonomic characterization was obtained from 5-days old cultures grown on medium R2A with 1% NaCl at 30 °C. The isomer type of the diaminopimelic acid of the cell wall was analyzed according to the method described by Lechevalier (Lechevalier and Lechevalier 1971) . The respiratory quinones were isolated using the method of Collins et al. (1977) , and analyzed by HPLC (Agilent Technologies 1260 In nity) (Groth et al. 1996) . Polar lipids pro les were analyzed as described by two-dimensional TLC (Minnikin et al. 1984; Toru et al. 1983) , and the different spots were observed by spraying with the proper detection reagents (molybdophosphoric acid, molybdenum blue, ninhydrin, D reagent and α-naphthol). The cellular fatty acids were extracted and analyzed according to the standard MIDI protocol (Microbial Identi cation) and Sherlock Microbial Identi cation System (Sherlock version 6.1; midi database: TSBA6).
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4

Chemotaxonomic Characterization of Strain YIM 93776 T

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Biomass used for chemotaxonomic studies except fatty acid was obtained from cultures grown on ISP2 plate containing 10% (w/v) NaCl for 14 days at 37 °C . The diagnostic isomers of diaminopimelic acid were determined by HPLC according to methods used by Tang et al. (2009) and using TLC to verify it (Hasegawa et al.1983 , Lechevalier et al.1970 ). The whole-cell sugar pattern and peptidoglycan amino acids were detected by HPLC according to methods used by Tang et al. (2009) . The respiratory quinones were isolated using the method of Collins et al. (1977) and analysed by HPLC (Agilent Technologies 1260 In nity) (Groth et al.1996) . Polar lipids were extracted and then separated by using two dimensional TLC and identi ed using previously described procedures (Minnikin et al.1984; Hasegawa et al.1983 ). Molybdophosphoric acid, molybdenum blue, ninhydrin and α-naphthol were used for the detection of total polar lipids, phospholipids, aminolipids and glycolipids, respectively. For cellular fatty acid analysis, strain YIM 93776 T was grown on tryptic soya agar (TSA; Difco) with 10% (w/v) NaCl at 37°C and harvested after 7 days. Fatty acid methyl esters were extracted, methylated and analysed by using the Microbial Identi cation System (Sherlock version 6.1; MIDI database: TSBA6) according to the manufacturer's instructions (Sasser et al.1990 ).
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5

Lipid Profiling Using HPLC and GC

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Amino-acids contents were ascertained by High Performance Liquid Chromatography (HPLC-DAD at λ = 338 nm; λ = 208 nm, Agilent 1260 In nity), according to ISO 3903/d ISO 17180-2013 (MO/09 V02).
2.2.3. Crude fat (Folch method , MO/02 v01)
The lipid content was determined gravimetrically following an extraction of crude fat from 1 g of each sample according to the way characterized elsewhere (Folch et al. 1957; Khemir et al. 2020 ) using chloroform: methanol (2:1, v/v) solution containing 0.01% butylhydroxytoluene (BHT).
2.2.4. Fatty acids (ISO 12966-4 2015 and ISO 12966-2 2017, MO/03) To ascertained the fatty acid content, fatty acid methyl esters were recovered from the removed fat according to the standard ISO 12966-2:2017 procedure that comprises dissolution of glycerides in isooctane and trans-esteri cation via potassium hydroxide methanol solution, and then resolved using gas chromatography in the guise of the ISO 12966-2 (version 2012) and ISO 12966-4 (version 2015) (MO/03).
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6

Quantitative Analysis of L-homoserine and Ectoine

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The production of L-homoserine and ectoine were quanti ed by high-performance liquid chromatography (HPLC, Agilent Technologies 1260 In nity, U.S.A.). After fermentation, the culture broth samples were centrifuged to separate the supernatant from the fermentation cultures at 12,000 g for 10 min and then ltered using a 0.22 μm aqueous membrane. The supernatant containing product and byproduct was diluted appropriately for subsequent analysis. Precolumn O-phthalaldehy (OPA) derivatization was used to determine the concentration of L-homoserine as described previously [23] . Before the HPLC detection, total 800 μL OPA derivatization reagent was mixed with the broth supernatant for one minute. HPLC detection was conducted at a column temperature of 40 • C and the detection wavelength of 338 nm with a Phenomenex Luna C18 SB-Aq column (ODS 5 μm, 20 × 150 mm, Agilent, U.S.A.). 50 mM potassium dihydrogen phosphate/acetonitrile (81:19, v/v) was used as the mobile phase for L-homoserine detection at a ow rate of 1.0 mL/min, and the detection time was 15 min. The OD value of each sample was determined at 600 nm in triplicate using a Hitachi U-1100 spectrophotometer.
The concentration of glucose in the broth was determined at 505 nm using an enzyme-coupled glucose assay kit (Rsbio, China). All values were average of three independent experiments.
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7

Chemotaxonomic Characterization of Strain YIM 93776 T

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Biomass used for chemotaxonomic studies except fatty acid was obtained from cultures grown on ISP2 plate containing 10% (w/v) NaCl for 14 days at 37 °C . The diagnostic isomers of diaminopimelic acid were determined by HPLC according to methods used by Tang et al. (2009) and using TLC to verify it (Hasegawa et al.1983 , Lechevalier et al.1970 ). The whole-cell sugar pattern and peptidoglycan amino acids were detected by HPLC according to methods used by Tang et al. (2009) . The respiratory quinones were isolated using the method of Collins et al. (1977) and analysed by HPLC (Agilent Technologies 1260 In nity) (Groth et al.1996) . Polar lipids were extracted and then separated by using two dimensional TLC and identi ed using previously described procedures (Minnikin et al.1984; Hasegawa et al.1983 ). Molybdophosphoric acid, molybdenum blue, ninhydrin and α-naphthol were used for the detection of total polar lipids, phospholipids, aminolipids and glycolipids, respectively. For cellular fatty acid analysis, strain YIM 93776 T was grown on tryptic soya agar (TSA; Difco) with 10% (w/v) NaCl at 37°C and harvested after 7 days. Fatty acid methyl esters were extracted, methylated and analysed by using the Microbial Identi cation System (Sherlock version 6.1; MIDI database: TSBA6) according to the manufacturer's instructions (Sasser et al.1990 ).
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