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5 protocols using lipofectamine ranimax

1

Lipofectamine-Mediated siRNA Transfection

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Transfection of siRNA was carried out using Lipofectamine RANiMAX reagent (Thermo Fisher Scientific) 72 hours in advance of drug treatment.
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2

GPR120 Activation and Mitochondrial Function

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Grifolic acid and TUG891 were obtained from R&D Inc. (Minnneapolis, USA). GW9508, EPA, GPR120 polyclonal antibody, MTT and Cellular ATP assay kits were bought from Sigma-Aldrich (St. Louis, USA). Annexin V-FITC/PI staining kits were the products of BD Pharmingen (San Jose, USA). Rat GPR120 siRNA, lipofectamine RANiMAX, DMEM, FBS, JC-1 and Mitochondria Isolation Kit for Culture Cells were obtained from Thermo Fisher Scientific (Waltham, USA). NAD/NADH Assay Kits were the products of Abcam (Cambridge, UK). Protein extraction kits were bought from Bio-Rad (Hercules, USA). RNA isolation kits, reverse transcription kits and PCR kits were the products of Takara Biotechnology (Dalian, China).
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3

Silencing Bim in Breast Cancer

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The lentiviral vector pLKO.1-EGFP-puro which was a gift from Bob Weinberg (Addgene plasmid # 8453; http://n2t.net/addgene:8453; RRID: Addgene_8453) was used for transfection. Two human Bim siRNAs (#4390824 and #4392420, Invitrogen) were used to transfect breast cancer cell lines using Lipofectamine RANiMAX (Invitrogen) according to the manufacturer’s protocols. For the negative controls, nonspecific shRNA vector was created using a scrambled sequence of the Bim target sequences. Cells were harvested 48 h after transfection.
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4

Targeted Silencing of Cytoskeletal Proteins

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Cells were transfected with Lipofectamine RANi MAX (Invitrogen) in culture medium without antibiotics. Silencer Select Pre-designed siRNAs (Ambion, Loughborough, UK) against moesin (ID s70074), radixin (ID s201923), annexin II (ID s63242), fodrin (ID s232645), and Silencer Select Negative Control siRNA (#1) were used at a final concentration of 5 nM. The knockdown and cell phenotype were assessed 24, 48, and 72 h later.
Cells were grown on numbered grids, transfected with siRNA, and induced to form fenestrae using the standard protocol. Cells were fixed with 4% PFA/0.1% glutaraldehyde for 15 min and then were immunolabelled. Cells with no detectable immunostaining for the target protein were identified under an epifluorescence microscope, and their position was recorded. After processing for TEM, the identified cells were re-located under electron microscopy and imaged as described in Section 2.6.
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5

Knockdown of WNK1 and OSR1 in GCs

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Knockdown of WNK1 or OSR1 protein expression was induced by small interfering RNA (siRNA). The scramble siRNA (Silencer® Negative Control No. 1 siRNA, Cat. No. AM4635) and siRNAs targeting human WNK1 (ID: s35235) and OSR1 (ID: s19302) were purchased from Invitrogen. The sequences of WNK1 siRNAs are: sense 5′-CAAUGSGUCAGAUAUACGAAtt-3′; antisense 5′-UUCGAUAUCUGACUCAUUGtc-3′; OSR1 siRNA: sense 5′-GAACCUCAGUCAAAUCGAUtt-3′; antisense 5′-AUCGAUUUGACUGAGGUUCtt-3′. Dissociated GCs were seeded in 6-well plates (105 cells/well/2 ml) in DMEM plus 10% FBS at 24 h prior to transfection. Lipofectamine RNAiMAX/siRNA complexes were prepared by adding siRNA (15 nM as a final concentration) and 5 μl of Lipofectamine RANiMAX (Invitrogen, Carlsbad, CA) in 500 μL serum-free optiMEM. Complexes were allowed to form at RT for 10 min and added to each well in the 6-well plate. The cells were incubated at 37°C and subjected to experiments 48 h after transfection.
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