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7 protocols using l glutamic acid γ monohydroxamate

1

Colorimetric Transglutaminase Activity Assay

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TGase activity was measured using a colorimetric procedure in which N-α-carbobenzoxyl-glutaminyl-glycine (N-CBZ-Gln-Gly) (Sigma, Shanghai, China) was used as the substrate [8 (link)]. Forty microliters of substrate solution (30 mmol/L N-CBZ-Gln-Gly, 100 mmol/L hydroxylamine, 10 mmol/L glutathione, 200 mmol/L Tris-HCl buffer, pH6) was added to 100 μL of TGase solution to initiate the enzymatic reaction. After 10 min, the reaction was stopped by the addition of a 40-μL terminator (1 mol/L HCl, 4 % (v/v) trichloroacetic acid, 2 % (m/v) FeCl3 · 6H2O), and the reaction solution was subjected to spectrophotometry analysis at 525 nm. A calibration curve was obtained using L-glutamic acid γ-monohydroxamate (Sigma, Shanghai, China). One unit of TGase was defined as that required to generate 1 μmol of L-glutamic acid γ-monohydroxamate per min at 37 °C.
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2

Transglutaminase Activity Quantification

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Pro-TGase activation, using dispase (Worthington, NJ, USA), was performed as previously described [27 (link)]. TGase activity was measured using a colorimetric procedure in which N-α-carbobenzoxyl-glutaminyl-glycine (N-CBZ-Gln-Gly) (Sigma, Shanghai, China) was used as the substrate [6 ]. Forty microliters of substrate solution (30 mmol/L N-CBZ-Gln-Gly, 100 mmol/L hydroxylamine, 10 mmol/L glutathione, and 200 mmol/L Tris–HCl buffer at a pH of 6) was added to 100 μL of TGase solution to initiate enzymatic reaction. After 10 min, the reaction was stopped by the addition of 40 μL of terminator solution (1 mol/L HCl, 4 % (v/v) trichloroacetic acid, 2 % (m/v) FeCl3·6H2O) and the mixture was subjected to spectrophotometry analysis at 525 nm. A calibration curve was obtained using L-glutamic acid γ-monohydroxamate (Sigma, Shanghai, China). One unit of TGase was defined as the amount required to generate 1 μmol of L-glutamic acid γ-monohydroxamate per min at 37 °C. The results are the average of triplicate assays.
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3

Asparaginase Enzyme Inhibition Assay

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Erwinia chrysanthemi asparaginase (E.C. 3.5.1.1) was gifted by Jazz Pharmaceutics and was used at 1 U/mL. Methionine-l-sulfoximine and the SNAT5 inhibitor l-glutamic acid γ-monohydroxamate were purchased from Sigma-Aldrich. Other reagents are detailed in supplemental Table 1.
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4

Comprehensive Chemical Reagent Inventory

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Chemicals including 100% acetic acid, 4-aminoantipyrine, Coomassie Blue G-250, ethanol, ferric chloride, hydrogen chloride, meat extract, meat peptone, n-butanol, 85% phosphoric acid, potassium dihydrogen phosphate, sodium chloride, sodium dihydrogen phosphate monohydrate, and sodium hydrogen phosphate were from Merck, Darmstadt, Germany. Acetonitrile, agar, amylose-remazol brilliant blue R, bovine serum albumin, casein, 3,5-dinitrosalicylic acid, 2,2-diphenyl-1-picrylhydrazyl, Folin-Ciocalteu’s phenol-reagent, gallic acid, hydrochloric acid, hydrogen peroxide, 99% hydroxylamine hydrochloride, L-glutamic acid γ-monohydroxamate, L- Glutathione reduced, maltose, methanol, yeast extract, peptone from soybean, phenol, p-nitrophenyl butyrate, potassium sodium tartrate tetrahydrate, sodium acetate, sodium carbonate, starch, trichloroacetic acid, and Trizma Base were obtained from Sigma-Aldrich, Taufkirchen, Germany. CBZ-Glutaminylglycine was purchased from Zedira GmbH, Darmstadt, Germany. Potato dextrose agar and Mueller-Hinton broth were purchased from Biolife, Milano, Italy. Calcium chloride, D-(+)-glucose anhydrous, and iron (II) sulfate heptahydrate were obtained at Kemika, Zagreb, Croatia, while malt extract, potato dextrose broth, Triton X-100, tryptic soy broth, and tryptone were purchased from Fluka, Buchs, Switzerland.
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5

Soy Protein Isolate and Transglutaminase Study

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Soy
protein isolate (PROFAM 974) with 90%
protein, on a dry basis, was supplied by Archer Daniels Midland company
Protein Specialties Division, Netherlands. SPI had 5% moisture, 4%
fat, and 5% ash. Transglutaminase (Activa RM) was donated by Ajinomoto,
Japan. According to the data sheet provided by the company, Activa
RM contains 99.5% sodium caseinate and maltodextrin and 0.5% enzyme.
On the basis of our preliminary study, measured activity of the enzyme
was 47.8 unit per gram of enzyme.24 (link) Glycerol
and alkali lignin (code 370959) were purchased from Sigma-Aldrich
Inc. (St. Louis, MO). Calcium lignosulfonate was donated from Green
Agrochem, grade one, Jinan, China. Reagents for enzyme activity measurements
such as Tris–HCl, Tris-acetate buffer, CaCl2, glutathione,
hydroxylamine, CBZ-glutaminylglycine, l-glutamic acid γ-monohydroxamate,
and FeCl3-trichloroacetic were purchased from Sigma-Aldrich.
Citric acid, ethanol, methanol, BHT, and phosphoric acid were obtained
from Fisher Scientific. 1,1-Diphenyl-2-picrylhydrazyl (DPPH) was obtained
from Sigma Chemical Co.
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6

Synthesis and Characterization of Glutamic Acid Derivatives

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l-glutamic acid γ-monohydroxamate was purchased from Sigma-Aldrich Co., Ltd. (Shanghai, China). N-α-Carbobenzoxy-l-glutaminyl-glycine (Nα-CBZ-Gln-Gly) was purchased from Civi Chemical Technology Co., Ltd. (Shanghai, China). Reduced glutathione was purchased from Aladdin Reagent Co., Ltd. (Shanghai, China). All-in-One First-Strand cDNA Synthesis SuperMix (One-Step gDNA Removal) and TransStart Tip Green qPCR SuperMix that were used for RT-PCR (Reverse Transcription PCR) and qRT-PCR (quantitative Real-Time PCR) were purchased from TransBionovo Co., Ltd. (Beijing, China). All other reagents were obtained from commercial sources and were of analytical grade.
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7

Cloning and Protein Purification Protocol

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PrimeSTAR® MAX DNA Polymerase and In-Fusion® HD Cloning Kit were purchased from Takara Bio Inc (Shiga, Japan). LB broth (Miller) was purchased from Merck Millipore Corp (Billerica, MA, USA). Tryptone, extract yeast dried, tris (hydroxymethyl) aminomethane (Tris), acrylamide/bis mixed solution (29:1), and Rapid Stain CBB kit were purchased from Nacalai Tesque, Inc. (Kyoto, Japan). Prestained XL-Ladder was purchased from APRO Science Inc (Tokushima, Japan). Hydrochloric acid, sodium chloride, potassium chloride, disodium hydrogenphosphate 12-water, dipotassium hydrogenphosphate, potassium dihydrogen phosphate, glutathione (reduced form), Fe(III) chloride hexahydrate, and trichloroacetic acid were purchased from FUJIFILM Wako Pure Chemical Corporation (Osaka, Japan). N,N,N',N'-tetramethylethylenediamine, ammonium persulfate, and hydroxylamine hydrochloride were purchased from Kishida Chemical Co.,Ltd (Osaka, Japan). Z-QG was purchased from Peptide Institute, Inc. (Osaka, Japan). L-glutamic acid γ-monohydroxamate was purchased from Sigma-Aldrich Co. LLC (St. Louis, MO). Ultrapure water supplied by Milli-Q® Reference Water Purification System (Merck Millipore Corp., Billerica, MA, USA) was used for buffer preparation.
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