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Cc117

Manufactured by Merck Group

The CC117 is a compact and versatile laboratory centrifuge designed for a wide range of applications. It features a brushless motor and digital speed control, enabling precise spin speeds up to 6,000 rpm. The CC117 accommodates a variety of rotor types, allowing it to be used for diverse sample preparation and separation tasks.

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11 protocols using cc117

1

DRG Neuron Axon Outgrowth Assay

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DRG cultures were prepared as described previously [9 (link)–11 (link)]. 8-10 week old C57BL/6J mouse DRGs were dissociated and cultured for 24 hours in 96-well PDL plates (BD BioCoat, Corning 354461) coated with laminin (Sigma L2020, 10 μg/ml in PBS, one hour at room temperature) or CSPG (Millipore, CC117). CSPG (3.3 ng/well in 50 μl PBS) was immobilized by drying overnight in a tissue culture hood and then rinsed with 50 μl of water to remove excess salt. DRG neurons were plated at a density of 2,500 neurons/cm2 (833 neurons/well). Small molecules were added to the culture medium at the time of cell plating. After 24 hours of axon outgrowth, cultures were fixed and immunostained for βIII-tubulin (Sigma-Aldrich, T8660, 1:800) with an Alexa Fluor 488 secondary antibody (Invitrogen, A-11029, 1:500). Images were acquired using an ImageXpressmicro High Content Imaging System (Molecular Devices) with a 10X objective (four sites per well). Axon outgrowth was quantified using MetaXpress (Molecular Devices). The total axon length per neuron (axon length) is reported. n = 12-96 wells per condition.
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2

Quantifying Tumor-Derived CSPG Secretion

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CSPGs released by the tumor cells in media were measured using an ELISA based assay67 (link). Media samples from the 3D tumor constructs were incubated overnight at 4 °C in a 96-well immuno plate (Thermo Fischer Scientific). Alongside the sample media incubation, chicken extracellular CSPGs (Millipore, CC117) were used over a range of serial dilutions for the generation of standard curves. Following washes with PBS-Tween, monoclonal anti-chondroitin sulfate antibody produced in mouse/clone CS-56, ascites fluid (Sigma–Aldrich, C8035) was added for overnight incubation at 4 °C. After the next round of washes, HRP conjugated goat anti-mouse secondary antibody (Abcam) was incubated at room temperature for 2 h. TMB (3,3′,5,5′-tetramethylbenzidine) 1-C Substrate (Fischer Scientific) was introduced following the last round of washes with PBS-Tween. Finally, after the color developed for 10 min at room temperature, the reaction was stopped with 1 N HCl. The absorbance readings were measured at 450 nm wavelength and the fresh media readings were subtracted from the sample readings. The standard curve was utilized for calculating the quantities of CSPGs released in the different conditions and reported in pg mL−1.
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3

SH-SY5Y Cell Attachment and Neurite Outgrowth

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The SH-SY5Y neuronal cell line (ATCC) was grown in Hyclone Dulbecco’s modified Eagle’s high glucose media (GE Healthcare Life Sciences, SH-30081.02) supplemented with 4mM L-glutamine, 1mM sodium pyruvate, 1% penicillin/streptomycin/neomycin (PSN) and 10% heat-inactivated fetal bovine serum (Invitrogen). SH-SY5Y cells were plated at an initial density of 12,000 cells/cm2 onto tissue culture surfaces for four days under different conditions including 1) Laminin, 2) Laminin + CSPG, 3) Laminin + CSPGs pretreated with chondroitinase ABC (ChABC), 4) Laminin + ISP in the media, 5) Laminin + CSPG + ISP in the media. Tissue culture dishes were coated with laminin (2µg/ml, Sigma, L2020) and/or CSPG (15µg/ml, Millipore, cc117) for 3 hours at room temperature. Of note, CSPGs used in this study contained a mixture of neurocan, phosphacan, versican, and aggrecan. Where appropriate, ChABC (0.1 U/ml Sigma, C3667-10UN) was added with laminin + CSPG mixture to tissue culture surfaces for 1h and incubated at 37°C during coating and prior to cell plating. In ISP condition, cells were pretreated with ISP (2.5µM) for 30 min.
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4

SH-SY5Y Cell Attachment and Neurite Outgrowth

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The SH-SY5Y neuronal cell line (ATCC) was grown in Hyclone Dulbecco’s modified Eagle’s high glucose media (GE Healthcare Life Sciences, SH-30081.02) supplemented with 4mM L-glutamine, 1mM sodium pyruvate, 1% penicillin/streptomycin/neomycin (PSN) and 10% heat-inactivated fetal bovine serum (Invitrogen). SH-SY5Y cells were plated at an initial density of 12,000 cells/cm2 onto tissue culture surfaces for four days under different conditions including 1) Laminin, 2) Laminin + CSPG, 3) Laminin + CSPGs pretreated with chondroitinase ABC (ChABC), 4) Laminin + ISP in the media, 5) Laminin + CSPG + ISP in the media. Tissue culture dishes were coated with laminin (2µg/ml, Sigma, L2020) and/or CSPG (15µg/ml, Millipore, cc117) for 3 hours at room temperature. Of note, CSPGs used in this study contained a mixture of neurocan, phosphacan, versican, and aggrecan. Where appropriate, ChABC (0.1 U/ml Sigma, C3667-10UN) was added with laminin + CSPG mixture to tissue culture surfaces for 1h and incubated at 37°C during coating and prior to cell plating. In ISP condition, cells were pretreated with ISP (2.5µM) for 30 min.
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5

Axonal Growth Modulation by CSPGs, Sildenafil, and cGMP

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All the compounds used in the present study were added to the axonal compartment only on DIV2, when axons were starting to grow into the axonal compartment, and then daily during the experimental period. To examine the effect of CSPGs on axonal growth, CSPGs (2 μg/ml, Millipore, Cat# CC117) were applied to the axonal compartment. To examine the effect of sildenafil on axonal growth, sildenafil citrate (300 nM, Sigma) was added into the axons cultured under normal and CSPGs conditions. To examine the effect of cGMP on axons, a stable analog of cGMP, 8-Br-cGMP (20μM, Sigma) was added into axons cultured under normal and CSPGs conditions.
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6

Pericyte Response to Inflammatory Stimuli

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Mouse brain vascular pericytes (iXCells Biotechnologies, 10MU-014) were grown in cell culture flasks coated in 0.01% poly-l-lysine (PLL, Trevigen, 3438-100-01). Cells were grown in Supplemented Mouse Pericyte Growth Media (SMPGM), i.e., 2% fetal bovine serum (FBS), 1% penicillin/streptomycin, and 1% Pericyte Growth Supplement (iXCells, Biotechnologies, MD-0092) in an incubator at 37 °C and 5% CO2. Pericytes were plated in PLL-coated black 96-well plates (BD Falcon, 353219) at a density of 7500 cells per well in 200 μL of SMPGM. 48 h later, the medium was replaced with SMPGM containing 0.2% FBS. For stimulation, pericytes were either treated with an inflammatory cytokine cocktail of recombinant mouse interferon gamma (IFN-γ) (PeproTech, 345-05, 10 ng/mL) and recombinant mouse IL-1β (R&D, 401-ML/CF, 10 ng/mL), or with CSPGs (Millipore, CC117, 10 μg/mL). After 48 h of treatment, the medium was discarded, and the cells were then overlaid with fresh serum-free DMEM for another 24 h to eliminate the presence of inflammatory stimuli from the culture medium. Each condition was carried out with four technical replicates. Post-24 h, the conditioned media were collected and centrifuged at 2000 rpm for 3 min to pellet any floating cells. The conditioned media were then stored at − 80 °C for analysis.
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7

Evaluating CSPG Effects on OPC Growth

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To determine the effects of CSPGs on OPC growth in vitro, flat-bottom 96-well plates were first coated with 10 μg ml−1 poly-L-lysine overnight, followed by a rinsing with water. Purified CSPGs (Millipore CC-117), a commercial mixture containing neurocan, phosphacan, versican and aggrecan, were coated onto the 96-well plates at a concentration of 10 ng ml−1–10 μg ml−1 diluted in sterile water for 3–4 h, followed by a rinsing with water. The control wells contained poly-L-lysine alone or bovine serum albumin (1–10 μg ml−1). Enriched OPCs were seeded at a density of 5.0–10.0 × 104 cells per well in OPC media (n=4 wells per condition), and the plates were incubated at 37 °C and 8.5% CO2 for 18–24 h for most experiments. The cells were fixed with 4% ice-cold paraformaldehyde at 4 °C for 10 min, rinsed with phosphate-buffered saline (PBS), and stored at 4 °C until processed for immunocytochemistry. In other experiments, OPCs were seeded onto astrocyte-secreted ECM.
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8

Culturing Embryonic Neocortical Neurons

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Dorsal regions of neocortex were dissected from embryos at E15 or from explants 2 d in vitro (DIV) after E13 ex utero electroporation and culturing. The tissue was dissociated in 0.25% Trypsin-EDTA for 15 min in a 37°C water bath with occasional, gentle trituration. The dissociated cells were then plated in Neurobasal medium supplemented with 2% B27, 1× GlutaMAX, and 1× Pen/Strep on 24- or 96-well plates coated with 50 μg/ml poly-D-lysine (Sigma). Cultures were seeded at 1.2 × 106 cells/well (24-well plate) for Western blottings, 1 × 105 cells/well of a 96-well plate for subsequent microscopic analyses of morphology, or 2.5 × 104 cells/well of a 96-well plate for quantitative immunocytochemistry. The cultures were maintained in a 37°C, 5% CO2 incubator. After 2 DIV (E17 equivalent), cultures were either fixed for microscopic analyses or scraped and lysed for Western blot analyses. For exogenous CSPG exposure, purified neural CSPGs (CC117, EMD Millipore) were suspended in PBS at 50 μg/ml and added to the medium of cultured neurons at 3 μg/ml.
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9

Murine Hippocampal Primary Culture

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E18.5 pups were sacrificed and hippocampi dissected into Hank's buffered saline solution (HBSS, Gibco #14185045). The tissue was minced, trypsinised (0.025%) and triturated with heat‐polished glass pipettes. Plating was in Neurobasal medium (Thermo Fisher #21103049) with 10% FCS, 2 mM L‐glutamine (Gibco #25030149), B27 (Gibco #17504001), 10 mM HEPES (Gibco #15630056) and penicillin/streptomycin. Fifty percent of media was exchanged to FCS‐free medium after 24 h and then every 36 h. CSPG (Merck #CC117) coatings were performed as described previously (Shen et al, 2009 (link); Jin et al, 2018 (link)).
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10

Regulation of Microtubule Acetylation in Cells

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The following antibodies were used: CSPGs (2 μg/ml; CC117, EMD Millipore), cycloheximide (10 μg/ml; C0934, Sigma Aldrich), recombinant rat myelin-associated glycoprotein (MAG; 30 μg/ml; P07722, R&D Systems), Y-27632 ROCK inhibitor (10 μM; 1254, Tocris Bioscience), anti- αTAT1 (1:200; ab58742, Abcam), anti-HDAC6 (1:500; NB100-91805, Novus Biologicals), anti-acetylated α-tubulin (1:1000; D20G3, Cell Signaling Technology), anti-α-tubulin (1:5000; DM1A, Sigma-Aldrich), anti-β-actin (1:5000; AC-74, Sigma-Aldrich), anti-β III tubulin (1:5000; MRB435P, BioLegend) and anti-GFP (1:500; Sigma-Aldrich). Lentivirus containing GFP (control) or GFP-tagged wild-type αTAT1 constructs, under the human cytomegalovirus (CMV) promoter, was purchased from Dr. Mingjie Li (Washington University School of Medicine, St. Louis, MO; Li et al., 2010 (link)). HDAC6 activity was determined using the fluorometric HDAC6 Activity Assay kit (BioVision), as per manufacturer’s instructions.
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