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10 protocols using ba460 500

1

Long-term Cochlear Imaging Technique

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For long-term organ-scale imaging, we partially cut off the capsule adjacent to the apex tip of cochlear duct using tweezers carefully and the semicircular canals were removed. The isolated cochlea was put onto the dish as described above. For microscopy, we used an incubator-integrated multiphoton fluorescence microscope system (LCV-MPE, Olympus) with a × 25 water-immersion lens (NA = 1.05, WD = 2 mm, XLPLN25XWMP2, Olympus). The excitation wavelengths were set to 840 nm for CFP (InSight DeepSee, Spectra-Physics). Imaging conditions for the FRET biosensor were as follows: scan size: 800 × 800 pixels; scan speed: 10 μs/pixel; IR cut filter: RDM690 (Olympus); dichroic mirrors: DM505 and DM570 (Olympus); and emission filters: BA460-500 for CFP and BA520-560 for FRET detection (Olympus).
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2

Two-Photon Imaging of Transgenic Mice

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The establishment of transgenic mice expressing AKAR3EV (PKAchu mice) was described previously (Kamioka et al., 2012 (link)). Briefly, 8- to 13-week-old female mice were used for the in vivo imaging. The ear hair was removed with a razor 1 d before the experiments. Mice were anesthetized with 1.5% isoflurane (FUJIFILM Wako Pure Chemical Corp.) inhalation and placed in a side-lying position on an electric heater maintained at 37°C. The ear skin was placed on the cover glass. Two-photon excitation microscopy was performed with an FV1200MPE-IX83 inverted microscope (Olympus) equipped with a ×30/1.05 silicon oil-immersion objective lens (XLPLN 25XWMP; Olympus), an InSight DeepSee Ultrafast laser (Spectra Physics), an IR-cut filter (BA685RIF-3), two dichroic mirrors DM505 (Olympus), and two emission filters (BA460-500 for CFP and BA520-560 for YFP) (Olympus). The excitation wavelength was 840 nm.
The animal protocols were approved by the Animal Care and Use Committee of Kyoto University Graduate School of Medicine (approval no. 22063).
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3

Two-Photon Imaging of Cell Dynamics

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Two-photon excitation microscopy was performed with FV1200MPE-BX61WI upright microscopes, equipped with a 25X/1.05 water-immersion objective lens (XLPLN 25XWMP; Olympus, Tokyo, Japan) and an InSight DeepSee Ultrafast laser (0.95 W at 900 nm) (Spectra-Physics, Santa Clara, CA, USA). The laser power used for observation was 2–4% for mice expressing EKAREV-NES/NLS, 10–15% for Fucci mice. Scan speed was 8 μs/pixel. Images were recorded every 5 min for long-time imaging or every 1.5 min or 2.5 min for short-time imaging of Eisuke mice expressing EKAREV-NLS, and every 1 hr for imaging of Fucci mice and Eisuke mice expressing EKAREV-NES. The excitation wavelength was 840 nm for mice expressing a FRET biosensor and 910 nm for Fucci mice. For FRET mouse imaging, we used an IR-cut filter, RDM690 (Olympus), two dichroic mirrors, DM505 (Olympus) and DM570 (Olympus), and three emission filters, FF01-425/30 (Semrock, Rochester, NY) for second harmonic generation imaging, BA460-500 (Olympus) for CFP, and BA520-560 (Olympus) for FRET. For Fucci mouse imaging, we used an IR-cut filter, RDM690 (Olympus), two dichroic mirrors, DM505 (Olympus) and DM570 (Olympus), and three emission filters, FF01-472/30 (Semrock) for second harmonic generation images, BA495-540 (Olympus) for mAG, and BA575-630 (Olympus) for mKO2. Images were acquired with a viewfield of 0.213 mm2 in 2–3 μm steps.
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Two-photon Excitation Microscopy for Live-cell Imaging

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For two-photon excitation microscopy (2PM), we used an FV1200MPE-IX83 inverted microscope (Olympus) equipped with a 30×/1.05 NA silicon oil-immersion objective lens (UPLSAPO 30XS; Olympus), an LCV110-MPE incubator microscope (Olympus) equipped with a 25×/1.05 water-immersion objective lens (XLPLN 25XWMP2; Olympus), and an InSight DeepSee Laser (Spectra Physics). The laser power was set to 3–18%. The scan speed was set between 4–12.5 μs per pixel. Z-stack images were acquired at 1–10 μm intervals. In time-lapse analyses, images were recorded every 1–3 min. The excitation wavelength for CFP was 840 nm. We used an IR-cut filter (BA685RIF-3), two dichroic mirrors (DM505 and DM570), and two emission filters (BA460-500 for CFP and BA520-560 for YFP) (Olympus). Confocal images were acquired with an FV1000/IX83 confocal microscope (Olympus) equipped with a 30×/1.05 NA silicon oil-immersion objective lens (UPLSAPO 30XS; Olympus).
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Multiphoton Microscopy for Cell Imaging

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We used an FV1000MPE‐BX61WI upright microscope (Olympus, Tokyo, Japan) equipped with a 25×/1.05 water‐immersion objective lens (XLPLN 25XWMP; Olympus), and an InSight DeepSee Ultrafast laser (0.95 W at 900 nm; Spectra Physics, Mountain View, CA). The excitation wavelength for cyan fluorescent protein (CFP) was 840 nm. An IR‐cut filter, BA685RIF‐3, two dichroic mirrors, DM505 and DM570, and four emission filters, FF01‐425/30 (Semrock, Rochester, NY) for the second harmonic generation (SHG), BA460‐500 (Olympus) for CFP, BA520‐560 (Olympus) for yellow fluorescent protein (YFP), and 645/60 (Chroma Technology Corp., Bellows Falls, VT) for Qtracker 655 (Life Technologies, Carlsbad, CA), were used. The microscope was equipped with a two‐channel GaAsP detector unit and two built‐in photomultiplier tubes. FluoView software (Olympus) was used to control the microscope and to acquire images, which were saved in the multilayer 16‐bit Tagged Image File Format. Recorded images were processed and analyzed with MetaMorph software (Molecular Devices, Sunnyvale, CA).
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6

Multiphoton Imaging Microscopy Setup

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We used an FV1200MPE‐BX61WI upright microscope (Olympus) equipped with a 25×/1.05NA water‐immersion objective lens (XLPLN 25XW‐MP; Olympus) for the imaging through the imaging window and an FV1000MVE inverted microscope (Olympus) equipped with a 30×/1.05NA silicon‐immersion objective lens (UPLSAPO 30×S; Olympus). Both microscopes are also equipped with an InSight DeepSee Ultrafast laser (Spectra Physics, Mountain View, CA, USA), two GaAsP detector units, and two built‐in photomultiplier tubes. The laser power used for observation was 10–20%. The scan speed was set at 2 μs/pixel. The excitation wavelength for CFP was 840 nm. We used an IR‐cut filter, BA685RIF‐3, two dichroic mirrors, DM505 and DM570, and three emission filters, BA460‐500 (Olympus) for CFP, BA520‐560 (Olympus) for YFP, and 645/60 (Chroma Technology Corp. Bellows Falls, VT, USA) for Alexa 647. Acquired images were analyzed with MetaMorph software (Molecular Devices) as described previously.30
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7

Two-Photon Excitation Microscopy Protocol

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For two-photon excitation microscopy (2PM), we used an FV1200MPE-IX83 inverted microscope (Olympus, Tokyo, Japan) equipped with a 30x/1.05 NA silicon oil-immersion objective lens (UPLSAPO 30XS; Olympus) and an FV1200MPE-BX61WI upright microscope equipped with a 25x/1.05 water-immersion objective lens (XLPLN 25XWMP; Olympus) and an InSight DeepSee Laser (Spectra Physics, Santa Clara, CA, USA). The laser power was set to 8–10% and 2–4% for the observation of the intestine and the skin, respectively [33 (link), 38 (link)]. The scan speed was set at 20 μs/pixel. We used 840-nm light to excite CFP. We used an IR-cut filter (BA685RIF-3), two dichroic mirrors (DM505 and DM570), and two emission filters (BA460-500 for CFP and BA520-560 for YFP) (Olympus). Acquired images were analyzed with MetaMorph software (Universal Imaging, West Chester, PA, USA) as described previously [34 (link), 39 (link)].
Confocal images were acquired with an FV1000/IX83 confocal microscope (Olympus) equipped with a 30x/1.05 NA silicon oil-immersion objective lens (UPLSAPO 30XS; Olympus).
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8

Multiphoton Fluorescence Microscopy for Live-Cell Imaging

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The samples were prepared for explant culture as described above and placed into an incubator-integrated multiphoton fluorescence microscope system (LCV-MPE, Olympus) with a ×25 water-immersion lens (NA=1.05, WD=2 mm, XLPLN25XWMP2, Olympus) and an inverted microscope (FV1200MPE-IX83, Olympus) with a ×30 silicone-immersion lens (NA=1.05, WD=0.8 mm, UPLSAPO30XS, Olympus). The excitation wavelengths were set to 840 or 930 nm, for the CFP of the ERK FRET biosensor and EGFP, respectively (InSight DeepSee, Spectra-Physics). The filter sets used were as follows; IR cut filter: RDM690 (Olympus), dichroic mirrors: DM505 and DM570 (Olympus), and emission filters: BA460-500 for CFP, BA520-560 for FRET, and BA495-540 for EGFP detection (Olympus).
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9

Multimodal Imaging with Upright Microscope

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We used an FV1000MPE-BX61WI upright microscope (Olympus, Tokyo, Japan) equipped with a 25Â/1.05 waterimmersion objective lens (XLPLN 25XWMP; Olympus) and an InSight DeepSee Ultrafast laser (0.95 W at 900 nm; Spectra Physics, Mountain View, CA). The excitation wavelength for cyan fluorescent protein (CFP) was 840 nm. An infrared lightecut filter, BA685RIF-3 (Olympus); two dichroic mirrors, DM505 and DM570 (Olympus); and four emission filters, FF01-425/30 (Semrock, Rochester, NY) for the second harmonic generation, BA460-500 (Olympus) for CFP, BA520-560 (Olympus) for yellow fluorescent protein, and 645/60 (Chroma Technology, Bellows Falls, VT) for Qtracker 655 (Life Technologies, Carlsbad, CA), were used. Qtracker 655 is intravenously administered with other reagents to confirm drug delivery to target organs. For Fucci mouse imaging, an IR-cut filter, RDM690 (Olympus); two dichroic mirrors, DM505 and DM570; and three emission filters, FF01-472/30 (Semrock) for second harmonic generation images, BA495-540 (Olympus) for mAG, and BA575-630 (Olympus) for mKO2, were used. The microscope was equipped with a two-channel GaAsP detector unit and two built-in photomultiplier tubes. FluoView software version 4.1a (Olympus) was used to control the microscope and to acquire images, which were saved in the multilayer 16-bit tagged image file format.
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10

Multicolor Fluorescence Lifetime Imaging

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We used an FV1000MPE-BX61WI upright microscope (Olympus) equipped with a 25x/1.05 water-immersion objective lens (XLPLN 25XWMP; Olympus), and an InSight DeepSee Ultrafast laser (0.95 W at 900 nm; Spectra Physics, Mountain View, CA). The excitation wavelength for cyan fluorescent protein (CFP) was 840 nm and that for mCherry was 1040 nm. An IR-cut filter, BA685RIF-3, three dichroic mirrors, DM450, DM505 and DM570, and four emission filters, FF01-425/30 (Semrock) for the second harmonic generation (SHG), BA460-500 (Olympus) for CFP, BA520-560 (Olympus) for YFP by FRET, and 645/60 (Chroma Technology, Bellows Falls, VT) for mCherry, were used.
The microscope was equipped with a two-channel GaAsP detector unit and two multi alkali detectors. FluoView software (Olympus) was used to control the microscope and to acquire images, which were saved in the multilayer 16-bit tagged image file format. Metamorph software was used for background noise subtraction and image analysis. After background subtraction, the FRET/CFP ratio images were represented in the intensitymodulated display (IMD) mode. In the IMD mode, eight colors from red to blue are used to represent the FRET/CFP ratio, with the intensity of each color indicating the mean intensity of FRET and CFP channels.
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