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Native page bis tris gels

Manufactured by Thermo Fisher Scientific
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4–16% Native PAGE Bis-Tris gels are precast polyacrylamide gels designed for the separation of native proteins using a Bis-Tris buffer system. The gels have a gradient of 4-16% acrylamide concentration, which allows for the separation of a wide range of protein sizes.

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4 protocols using native page bis tris gels

1

Bcl-xL Overexpression and Protein Fractionation

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Three days after transduction of TKPTS cells with Bcl-xL expression adenovirus, proteins were isolated and separated into cytoplasmic and mitochondrial fractions as described. Mitochondrial proteins were solubilized by extraction with 1% n-dodecyl-β-D-maltoside. Cytoplasmic and mitochondrial proteins were separated by Blue Native PAGE using 4–16% Native PAGE Bis-Tris gels according to the protocol by the manufacturer (Life Technologies, Carlsbad, CA, USA).
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2

Bcl-xL Mitochondrial Protein Analysis

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Three days after transduction of TKPTS cells with Bcl-xL expression adenovirus, proteins were isolated and separated into cytoplasmic and mitochondrial fractions as described. Mitochondrial proteins were solubilized by extraction with 1% n-dodecyl-β-D-maltoside. Cytoplasmic and mitochondrial proteins were separated by Blue Native PAGE using 4–16% Native PAGE Bis-Tris gels according to the protocol by the manufacturer (Life Technologies, Carlsbad, CA, USA).
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3

Native Blue Native PAGE for Mitochondrial Complexes

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BN-PAGE was performed using NativePAGE gels from Life Technologies, following the manufacturer’s instructions. Mitochondria were suspended in native PAGE sample buffer (Life Technologies) supplemented with digitonin and protease inhibitors and incubated on ice for 20 min. The digitonin:protein ratio used was 10:3. Following centrifugation at 20,000 g for 30 min, the supernatant was recovered, mixed with the G-250 sample additive (Life Technologies) and native PAGE sample buffer (Life Technologies), and loaded onto 3–12% precast Bis–Tris Native PAGE gels (Life Technologies). The NativeMark Protein standard (Life Technologies), run together with the samples, was used to estimate the molecular weight of the protein complexes. Electrophoreses was performed using the Native PAGE Running buffer (as anode buffer; Life Technologies) and the Native PAGE Running buffer containing 0.4% Coomassie G-250 (cathode buffer). Gels were stained with the Novex Colloidal Blue staining kit (Life Technologies) to reveal the protein complexes.
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4

Mitochondrial Complex I Activity Assay

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Assays were performed as in ref. 71 (link). Mitochondria were purified from ten thoraces of 7–10-day-old male flies and BN-PAGE was performed using NativePAGE gels from Life Technologies, following the manufacturer’s instructions. Mitochondria were suspended in NativePAGE sample buffer (Life Technologies) supplemented with 1% digitonin and protease inhibitors, incubated on ice for 20 min and centrifuged at 20,000 × g for 30 min at 4 °C, the supernatant was recovered, G-250 (Life Technologies) sample additive and NativePAGE sample buffer was added before loading onto 3–12% precast Bis–Tris NativePAGE gels (Life Technologies). Electrophoreses was performed using the NativePAGE Running buffer (as anode buffer, from Life technologies) and the NativePAGE Running buffer containing 0.4% Coomassie G-250 (cathode buffer). Protein complexes were revealed by staining with Novex Colloidal Blue staining kit (Life Technologies). Complex I activity in native gels was performed by incubating gels in 0.1 mg/mL NADH, 2.5 mg/mL nitrotetrazolium blue chloride, 5 mM Tris-HCl (pH 7.4) overnight at room temperature. Gels were imaged using a BioRad station and densitometry was performed in ImageJ.
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