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Penicillin streptomycin

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Penicillin-streptomycin is a sterile antibiotic solution commonly used in cell culture applications. It contains the antibiotics penicillin and streptomycin, which work to prevent bacterial contamination in cell culture systems.

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67 protocols using penicillin streptomycin

1

Protocol for AT-MSCs Isolation from Adipose Tissue

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For AT-MSCs isolation, the previously reported protocols [23 (link), 24 (link)] were adjusted as follows: abdominal subcutaneous adipose tissue biopsy samples were thoroughly washed with Hanks’ solution (BioloT, Russia) supplemented with Diflucan (Pfizer, USA), gentamicin (50 μg/ml, PanEco, Russia), and penicillin/streptomycin (100 U/ml/100 µg/ml, PanEco, Russia). Each sample was minced into small (~ 1 mm3) pieces with scissors and transferred into conical tubes. A fourfold volume of 0.1% collagenase type I solution (PanEco, Russia) in Dulbecco’s Modified Eagle’s Medium (DMEM)/F12 supplemented with 2 mM l-glutamine (BioloT, Russia) and 50 mg/ml gentamicin was added to each tube, and enzymatic dissociation was performed for 20 min at 37 °C. Enzymatic digestion was blocked by adding threefold volume of DMEM/F12 supplemented with 2 mM l-glutamine (BioloT, Russia), 10% fetal bovine serum (FBS) (Thermo Fisher, USA), and penicillin/streptomycin (100 U/ml/100 µg/ml, PanEco, Russia). The tubes were then centrifuged at 100g for 10 min at room temperature and the supernatant was discarded. The cell pellet was resuspended in DMEM/F12 supplemented with 2 mM l-glutamine (BioloT, Russia), 10% FBS (Thermo Fisher, USA), and penicillin/streptomycin (100 U/ml/100 µg/ml, PanEco, Russia) and seeded on Petri dishes.
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2

Nanoparticle-Mediated Cancer Therapeutics

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IR-780 iodide (Sigma-Aldrich, Saint Louis, MO, USA), Nile Blue A perchlorate (Sigma-Aldrich, Saint Louis, MO, USA), Poly(D,L-lactide-co-glycolide) (RG 858 S, Poly(D,L-lactide-co-glycolide) ester terminated, lactide:glycolide 85:15, Mw 190,000–240,000 Da, Sigma, Darmstadt, Germany), PVA (Mowiol 4-88, Sigma, Steinheim, Germany), chitosan oligosaccharide lactate (5 kDa, Sigma, Steinheim, Germany), penicillin/streptomycin (Paneco, Moscow, Russia), 2 mM L-glutamine (Paneco, Moscow, Russia), DMEM/F12 with 2 mM L-alanyl-L-glutamine (Gibco, Paisley, UK), Hoechst33342 (Thermo Fisher Scientific, Waltham, MA, USA), Versene solution (Paneco, Moscow, Russia), penicillin-streptomycin (Paneco, Moscow, Russia), bovine serum albumin (Paneco, Moscow, Russia), Herceptin (Roche, Mannheim, Germany), Crystal violet dye (LenReaktiv, St. Petersburg, Russia), fetal bovine serum (HyClone, Logan, UT, USA), Carboxy-H2DCFDA, (Thermo Fisher Scientific, Waltham, MA, USA), and resazurin sodium salt (AlfaAesar, Lancashire, UK).
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3

Neuronal Cell Oxidative Stress Response

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Neuronal cells (20,000) were plated in each well of Matrigel-treated 24-well plates and were cultured in DMEM/F12 medium supplemented with 2% serum replacement (“Gibco”, Carlsbad, CA, USA), 1 mM non-essential amino acids (“Paneco”, Moscow, Russia), 2 mM L-glutamine (“ICN Biomedicals Inc.”, Hackensack, NJ, USA), penicillin–streptomycin (50 U/mL; 50 µg/mL) (“Paneco”, Moscow, Russia), 1% B27 supplement (“Life Technologies”, Carlsbad, CA, USA), 5 µM forskolin (“Stemgent”, Cambridge, Massachusetts, USA), 20 ng/mL BDNF, 20 ng/mL GDNF and 200 µM ascorbic acid (all from “Peprotech”, Cranbury, NJ, USA) in a CO2 incubator at 5% CO2 and 37 °C. On the day of the experiment, the growth medium was changed to DMEM/F12 medium supplemented with 2 mM L-glutamine (“ICN Biomedicals Inc.”, Hackensack, NJ, USA) and penicillin–streptomycin (50 U/mL; 50 µg/mL) (“Paneco”, Moscow, Russia). N-ADA or N-DDA (5 µM) were added to the cells at the same time point and the control cultures were treated with an equal volume of DMSO. Cells were then incubated for 40 min and treated with 200 µM H2O2; the same volume of growth medium was used for the control wells. At 3 and 24 h time points of incubation, the cells were collected for RNA extraction and preparation of cell lysates and the conditioned growth media were collected for ELISA.
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4

Detailed iPSC Culture and Cryopreservation Protocol

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We grew iPSCs in Petri dishes coated with Matrigel (Corning, USA). Up to the second passage, we cultured iPSCs in mTesR1 medium (Stemcell technologies, Canada) with 50 U/ml penicillin/streptomycin (Paneco, Russia). After the second passage, we cultured iPSCs in TesR-E8 medium (Stemcell technologies, Canada) with 50 U/ml penicillin/streptomycin (Paneco, Russia). We passaged iPSCs with 0.05% Trypsin (Hyclone, USA) and 5 μM Y27632 (Stemgent, USA) and cryopreserved iPSCs in FBS (Hyclone, USA) with addition of 10% DMSO (Paneco, Russia) and 5 μM Y27632 (Stemgent, USA).
In some experiments, we used iPSC-based models of HD (iPSHD22 with 47Q, iPSHD11 with 40Q, iPSHD34 with 42Q) and healthy iPSCs (UEF3B) described previously in Nekrasov et al. (2016 (link)) and Holmqvist et al. (2016 (link)).
The list of cell lines used in our study is presented in Supplementary Table 1.
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5

Isolation of Umbilical Cord Mesenchymal Stem Cells

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UC-MSCs were isolated as follows: umbilical cord samples were cut into pieces 2 cm long and washed from blood clots in phosphate buffer saline (PBS) supplemented with Diflucan (Pfizer, USA), gentamicin (50 µg/ml, PanEco, Russia), and penicillin/streptomycin (100 U/ml/100 µg/ml, PanEco, Russia). Then, longitudinal incisions were made so that the umbilical vein and umbilical arteries could be removed. Each sample was minced into small (~ 1 mm3) pieces with scissors and transferred into conical tubes. A fourfold volume of 0.2% collagenase NB4 (Serva, Germany), 0.005% hyaluronidase (Sigma, USA), and 10% Accutase (BD BioSciences, USA) in DMEM/F12 medium supplemented with 2 mM l-glutamine (BioloT, Russia) and 50 µg/ml gentamicin (PanEco, Russia) was added to each tube. Enzymatic dissociation was performed at 37 °C for 90 min with constant agitation on Mini Rocker-Shaker (Biosan, Latvia). The obtained suspension was passed through a 70-μm filter (Sigma, USA) and centrifuged at 100g for 7 min at room temperature. The cell pellet was resuspended in DMEM/F12 supplemented with 2 mM l-glutamine (BioloT, Russia), 10% FBS (Thermo Fisher, USA), and penicillin/streptomycin (100 U/ml/100 µg/ml, PanEco, Russia) and seeded on Petri dishes.
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6

Cytokine Regulation in Cell Culture

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Lipopolysaccharide (LPS) (Sigma-Aldrich, cat.no L2630 St. Louis, MO, USA), streptomycin–penicillin (cat.no A063), trypsin (cat.no P037), EDTA, fetal bovine serum (cat.no BS-110/500) were from PanEco (Moscow, Russia). Culture medium Dulbecco’s Modified Eagle Medium (DMEM) (cat.no 21885-025) was sourced from Gibco (Thermo Fisher Scientific, Waltham, MA, USA). Rat IL-4 (400-04, Peprotech), IL-10 (400-19, Peprotech) Oasis® PRIME HLB cartridge (60 mg, 3cc, cat.no. 186008056) were obtained from Waters (Eschborn, Germany).
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7

Isolation of Bone Marrow Cells

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Right and left femur and tibia bones were obtained from each animal (n = 6). Bone marrow (BM) was isolated according to our modification of the generally accepted procedure [69 (link)]. Briefly, BM cells were flushed out from the tibia and femur bone cavities into 50 mL centrifuge tubes. After centrifugation at 500× g for 5 min, supernatants were removed and cell pellets were resuspended in full culture medium (a-MEM; Gibco, Life Technology Ltd., Paisley, UK), containing 20% EFV (HyClone laboratories, Logan, UT, USA), 2 mM L-glutamine (Gibco, Life Technology Ltd., Paisley, UK), and streptomycin/penicillin (100 µg/100 units/mL) (PanEco, Moscow, Russia). The viable nucleated cells were counted in a Neubauer chamber. The trypan blue exclusion test was applied to exclude dead cells.
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8

Inflammatory Signaling Pathway Analysis

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LPS (Sigma-Aldrich, St. Louis, MO, USA), rosiglitazone (Sigma-Aldrich), streptomycin–penicillin, trypsin, EDTA, fetal bovine serum and Culture medium Dulbecco’s Modified Eagle Medium (DMEM) were from PanEco (Moscow, Russia). Antibodies against COX-2 (Cell Signaling Technology, D5H5, Danvers, MA, USA), phospho-p38 (Cell Signaling Technology, 4511), p38 (Cell Signaling Technology, 9212), p-JNK (cat.no sc-12882), JNK (cat.no sc-571), and β-actin (cat.no sc-47778) (Santa Cruz Biotechnology, CA, USA (SCBT)); secondary horseradish peroxidase conjugated antibodies (anti-rabbit, anti-mouse, and anti-goat) (SCBT and CST); Western Blotting Substrate ECL (Thermo Fisher Scientific, MA, USA); and ELISA kits for PGE2, TNFα and IL-10 (Thermo Fisher Scientific) were also used.
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9

Inflammatory Response Pathway Analysis

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Lipopolysaccharide (LPS) (Sigma-Aldrich, cat.no L2630 St. Louis, MO, USA), streptomycin–penicillin (cat.no A063), trypsin (cat.no P037), EDTA, fetal bovine serum (cat.no BS-110/500) were from PanEco (Moscow, Russia). Culture medium Dulbecco’s Modified Eagle Medium (DMEM) (cat.no 21885-025) (Gibco, Thermo Fisher Scientific, Waltham, MA, USA). Antibodies against COX-2 (D5H5, cat.no 12282) and β-tubulin (Sigma Chemicals, Taufkirchen, Germany), secondary horseradish peroxidase conjugated antibodies (anti-rabbit, anti-mouse, and anti-goat) (SCBT and CST), western blotting substrate ECL (Thermo Fisher Scientific, cat.no 32209, Waltham, MA, USA). Oasis® PRIME HLB cartridge (60 mg, 3cc, cat.no. 186008056) were obtained from Waters, Eschborn, Germany.
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10

Simulating Microgravity Effects on Cells

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After isolation and counting, cells were pooled and divided into 2 groups: (1) 1 g—cells following Earth’s gravity (standard culture conditions)—and (2) sμg—cells following 3D clinorotation during 14 days (simulated microgravity). There were three independent experiments with two technical repetitions in each group. Cells were seeded at a density of 6 × 105 cells/cm2 in culture flasks (25 cm2, NUNC, Nalge Nunc International, Roskilde, Denmark) or slide flasks (10 cm2 NUNC, Nalge Nunc International, Roskilde, Denmark) in three replicates. Cultivation was performed in growth medium (a-MEM; (Gibco, Life Technology Ltd., Paisley, UK), containing 20% FBS (HyClone laboratories, Logan, UT, USA), 2 mM L-glutamine (Gibco, Life Technology Ltd., Paisley, UK), and streptomycin/penicillin (100 µg/100 units/mL) (PanEco, Moscow, Russia) for 4 days following 1 g. On day 5, the medium containing non-adherent cells was discarded, the vials were completely filled with fresh medium, air bubbles were removed, and the caps were tightly closed (Figure 5).
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