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Expifectamine 293 transfection kit

Manufactured by Thermo Fisher Scientific
Sourced in United States

The ExpiFectamine 293 Transfection Kit is a laboratory tool designed for efficient and high-yielding transient transfection of mammalian cells, particularly HEK293-derived cell lines. The kit provides a proprietary transfection reagent and optimized protocol to facilitate the delivery of DNA, RNA, or other macromolecules into the target cells.

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210 protocols using expifectamine 293 transfection kit

1

Transient Transfection and Protein Purification

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Each construct was used to transiently transfect Expi293F cells (Thermo Fisher) using the ExpiFectamine 293 Transfection Kit (Thermo Fisher). Seven days post transfection, the cell supernatant was collected, filtered (0.22 µm), and incubated with Ni2+-NTA agarose beads (GE Life Sciences) for 2 h at room temperature (RT). Proteins were eluted by 200 mM imidazole, buffer-exchanged to PBS ×1, aliquoted, and stored at −80 °C.
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2

Production of Digoxigenin-Labeled Truncated ACE2

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cDNA encoding a truncated human ACE2 fused to human albumin was sub-cloned into pFUSE2ss-CLIg-hk (InvivoGen). The vector was transiently transfected into Expi293F cells in suspension (Thermo Fisher Scientific) using the ExpiFectamine 293 transfection kit (Thermo Fisher Scientific) according to the manufacturer’s protocol. Cells were cultured for 7 days at 37 °C with 80% humidity and 8% CO2 on an orbital shaker platform set to 125 rpm before the medium was collected. The secreted fusion protein was purified on a CaptureSelect™ human albumin affinity matrix (Life Technologies), and protein eluted by adding 20 mM Tris and 2.0 M MgCl2, pH 7.0 before up-concentration using Amicon® Ultra-15 50K Centrifugal Filter Units (Merck Millipore). Buffer exchange to PBS was performed before size exclusion chromatography (Äkta Avant, GE Healthcare) with a SuperdexTM 200 Increase 10/300 GL (Cytiva) prior to up-concentration using Amicon® Ultra-0.5 Centrifugal Filter Units (Merck Millipore). The protein eluted as a dimer. For hapten-conjugation, digoxigenin-NHS (Sigma Aldrich, cat. No 11333054001, 40μg/mg protein) was added to protein solublized in PBS. After 30 min of incubation at 22 °C, free digoxigenin was removed using Amicon® Ultra-0.5 Centrifugal Filter Units.
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3

Recombinant SARS-CoV-2 S1 Beta Protein Production

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pAd/SARS-CoV-2-S1Beta was amplified and purified using a ZymoPURE II plasmid maxiprep kit (Zymo Research). For the transfection of Expi293 cell, we used an ExpiFectamine 293 transfection kit (Thermo Fisher) according to the manufacturer’s instructions. Cells were seeded at 3.0 × 106 cells/mL 1 day before transfection and grown to ~4.5 × 106 to 5.5 × 106 cells/mL. Mixtures of 1 μg of DNA and ExpiFectamine per mL of culture were combined and incubated for 15 min before addition to the culture at a density of 3.0 × 106 cells/mL of culture. At 18 to 22 h posttransfection, an enhancer mixture was added, and the culture was shifted to 32°C. The supernatants were harvested at 5 days posttransfection and clarified by centrifugation to remove cells, followed by filtration through 0.8-μm, 0.45-μm, and 0.22-μm filters. The supernatants were either subjected to further analysis by sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) and Western blotting or stored at 4°C before purification, as previously described (30 (link), 35 (link), 56 (link)).
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4

Recombinant Viral Fusion Protein Production

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LayV F ectodomain constructs include codon-optimized LayV F (residue 1 to 482) fused to a C-terminal GCN4 followed by a linker (GSGGGS) and a hexa-histidine tag (HHHHHH). The GhV F ectodomain construct used for cryoEM includes residues 1 to 586 C-terminally fused to the I53-50A component via an intervening 16 GS linker (70 (link)) followed by a GSGGGS linker and a 6×His tag whereas the other constructs have a C-terminal GSGGGS linker followed by a 6×His tag. The LayV F wildtype, N95C/A114C, I167F/S186P, I167F/S186P/N95C/A114C and GhV F wildtype, S196C/A215C, I268F/Q287P, I268F/Q287P/S196C/A215C were synthesized by Twist Bioscience and cloned into pTwist CMV vector. LayV F and GhV F ectodomains were produced in 100 mL Expi293F cells grown in suspension using Expi293 Expression Medium at 37 °C in a humidified 8% CO2 incubator rotating at 130 rpm. The cultures were transfected using ExpiFectamine™ 293 Transfection Kit (ThermoFisher Scientific) with cells grown to a density of 3 million cells per mL and cultivated for 4 d. The supernatants were harvested, and proteins were purified from clarified supernatants using a 1 mL HisTrap HP column (Cytiva), buffer exchanged, concentrated, and flash frozen in either TBS (50 mM Tris, 150 mM NaCl and 10 mM EDTA at pH 8.0). SDS-PAGE was run to check purity.
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5

SARS-CoV-2 RBD Purification for SPR Assays

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SARS-CoV-2 RBD constructs contain residues 328–531 of the spike protein from GenBank NC_045512.2 with an N-terminal signal peptide and a C-terminal thrombin cleavage site-Twin-Strep-8×His-tag. For SPR binding assays, proteins were expressed in Expi293F cells (Thermo Fisher Scientific) at 37 °C and 8% CO2. Transfections were performed using the ExpiFectamine 293 Transfection Kit (Thermo Fisher Scientific). Cell culture supernatants were collected three to five days after transfection and supplemented with 10x PBS to a final concentration of 2.5x PBS (342.5LmM NaCl, 6.75LmM KCl and 29.75LmM phosphates). SARS-CoV-2 RBDs were purified using a Cobalt affinity column (HisTALON Superflow column from Takara or HiTrap TALON crude column from Cytiva) followed by buffer exchange into PBS using a HiPrep 26/10 desalting column (Cytiva) or, for the Omicron BA.1 and BA.2 RBDs, a Superdex 200 Increase 10/300 GL column (Cytiva).
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6

Transient Expression of Antibodies in Expi293F

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Antibodies were expressed transiently in Expi293F cells (A14527, ThermoFisher Scientific, Waltham, MA, USA) through cotransfection of heavy (γ1/μ/α1/α2) and light-chain expression plasmids (κ/λ) using ExpiFectamine 293 Transfection Kit (A14525, ThermoFisher Scientific) at a heavy chain (HC):light chain (LC) ratio of 1:1. In the case of IgM and dIgAs, an expression plasmid encoding the human J chain precursor (UniProtKB number:human J chain P01591, Geneva, Switzerland) [5 (link)] was also included in the cotransfections at HC:LC:J chain ratios of 5:5:1. Cells were maintained in Expi293 expression medium (A1435102, ThermoFisher Scientific) for four to five days at 37 °C, 8% CO2 with continuous shaking at 135 rpm. The culture supernatants were harvested and clarified via centrifugation at 4000× g for 30 min and filtered through a 0.22 μm pore size hydrophilic polyethersulfone (PES) membrane.
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7

Engineered Anti-HER2 DVD-IgG1 Production

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The amino acid sequences of VH and VL of h38C2 were published previously.12 (link) Purified h38C2 IgG1 was a gift from the laboratory of Carlos F. Barbas III (The Scripps Research Institute; La Jolla, CA). To generate h38C2_Lys99Ala IgG1, light and mutated heavy chain encoding sequences of h38C2 IgG1 were cloned into mammalian expression vector pCEP4 via Nhel/Xhol (New England Biolabs). The two plasmids were co-transfected into a density of 3 – 106 cells/mL of Expi293F cell by using the ExpiFectamine 293 Transfection Kit (Thermo Fisher Scientific) following the manufacturer’s instructions. After culturing transfected cells at 37°C, 5% CO2 for 5 days, the culture supernatant was collected and purified by affinity chromatography with a 1-mL HiTrap Protein A column in conjunction with an ÄKTA FPLC instrument (both from GE Healthcare). The sequences, cloning, expression, and purification of the anti-HER2 DVD-IgG1 were published previously.16 (link),27 (link)
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8

Production and Purification of SARS-CoV-2 Spike Protein

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Recombinant soluble spike (S) protein derived from SARS-CoV-2 was expressed as previously described35 (link). In brief, a mammalian cell codon-optimized nucleotide sequences coding for the soluble version of S (GenBank: MN908947.3, amino acids 1-1,213) including a C-terminal thrombin cleavage site, T4 fold trimerization domain and hexahistidine tag was cloned into the mammalian expression vector pCAGGS. The S protein sequence was modified to remove the polybasic cleavage site (RRAR to A) and two stabilizing mutations were introduced (K986P and V987P, wild-type numbering). Recombinant proteins were produced in Expi293F cells (Thermo Fisher Scientific) by transfection with purified plasmid using the ExpiFectamine 293 Transfection Kit (Thermo Fisher Scientific). Supernatants from transfected cells were collected 3 days after transfection, and recombinant proteins were purified using Ni-NTA agarose (Thermo Fisher Scientific), then buffer-exchanged into PBS and concentrated using Amicon Ultra centrifugal filters (MilliporeSigma). For flow cytometry staining, recombinant S was labeled with Alexa Fluor 7647-NHS ester or biotinylated using the EZ-Link Micro NHS-PEG4-Biotinylation Kit (Thermo Fisher Scientific); excess Alexa Fluor 647 and biotin were removed using 7-kDa Zeba desalting columns (Thermo Fisher Scientific).
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9

Recombinant Protein Expression in Mammalian Cells

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Expi293F cells (Thermo Fisher Scientific) were used for mammalian expression of recombinant proteins used throughout this study. Cells were maintained in suspension culture at 37°C, 5% CO2 using Expi293F expression media and transfected according to protocols in the ExpiFectamine 293 Transfection Kit (Thermo Fisher Scientific, A14524). The SARS-CoV-2 Spike hexapro construct was produced in ExpiCHO cells (Thermo Fisher Scientific). Cells were maintained in suspension culture at 37°C, 8% CO2 using ExpiCHO expression media and transfected according to the Max titer protocol in the ExpiFectamine CHO Transfection Kit (Thermo Fisher Scientific, A29133). HEK293T cells were obtained from ATCC (CRL-3216) and maintained in RPMI-1640 media (Thermo Fisher Scientific) supplemented with 10% fetal bovine serum (JRH Biosciences), Penicillin (100 U/mL), Streptomycin (100 μg/mL), Glutamax (2 mM), sodium pyruvate (1 mM), nonessential amino acids (0.1 mM), HEPES buffer (15 mM), pH7.2–7.5 (all from Invitrogen, Life Technologies) and 2-mercaptoethanol (50 μM, Sigma).
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10

Recombinant Chimeric Antibody Production

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Recombinant chimeric antibodies were produced using Expi293 Expression System (Thermo Fisher Scientific) following the manufacturer’s instructions. Briefly, Expi293F cells were transfected with the vectors encoding the heavy and light chains (30 μg each) per cell culture of 60 mL using the ExpiFectamine 293 Transfection Kit (Thermo Fisher Scientific). The cell culture was incubated on a shaker for 6–7 days post transfection, and the cells were removed by centrifugation at 6,000 × g for 20 min. The culture supernatant was filtered through a 0.20 μm filter, and the antibodies were captured in a 1 mL HiTrap Protein A HP Column (Cytiva). The column was washed with 20 mL phosphate-buffered saline (PBS), and the antibodies were subsequently eluted with 5 mL citrate buffer (100 mM, pH 3.0). The eluate was dialyzed in PBS and used without further purification.
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