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Trio mr scanner

Manufactured by Siemens
Sourced in Germany

The Trio MR scanner is a magnetic resonance imaging (MRI) system designed for medical imaging applications. It provides high-quality imaging capabilities to support various diagnostic and research purposes. The Trio MR scanner's core function is to generate detailed images of the human body by using powerful magnetic fields and radio waves, enabling healthcare professionals to assess and diagnose medical conditions.

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50 protocols using trio mr scanner

1

Multimodal Brain Imaging: sMRI and DTI

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High-resolution sMRI and DTI data were acquired in the same scanning session for each subject with a 3-Tesla Siemens Trio MR scanner (Siemens, Erlangen, Germany). The sMRI sagittal images were acquired with a 3D magnetization prepared rapid acquisition gradient echo (MPRAGE) T1-weighted sequence with parameters: repetition time (TR)=1500ms, echo time (TE)=2.83ms, matrix=256x256, field of view (FOV)=256mm x 256mm 2, and 160 one-mm slices without gap and two averages. DTI data were acquired in alignment with the anterior commissure-posterior commissure plane with diffusion sensitizing gradients applied along 32 non-collinear directions with b-value=1000s/mm2, together with an acquisition without diffusion weighting (b-value=0) (TR=7400ms; TE=115ms; matrix=128×128; FOV=256mm × 256mm2 and 40 three-mm slices without gap).
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2

High-resolution MRI Protocol for Vascular Imaging

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All HRMRI studies were performed using a 3T GE DISCOVERY MR 750 (GE Healthcare, Waukesha, WI, USA) or a 3T Siemens Trio MR scanner (Siemens Healthcare, Ehrlangen, Germany). The multiple pulse sequences included three-dimensional time of flight MR angiography (3D TOF MRA), 3D T1-weighted imaging, proton attenuation weighted imaging, magnetization-prepared rapid acquisition with gradient-echo sequence (MPRAGE), and contrast enhanced T1-weighted imaging. Details of the sequence parameters are presented in the supplemental eTable 1 online. Images were reconstructed using the Reformate tool in the AW 4.5 workstation (GE Healthcare) or the D multiple planer reconstruction tool in the Siemens workstation.
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3

Multimodal Brain Imaging: sMRI and DTI

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High-resolution sMRI and DTI data were acquired in the same scanning session for each subject with a 3-Tesla Siemens Trio MR scanner (Siemens, Erlangen, Germany). The sMRI sagittal images were acquired with a 3D magnetization prepared rapid acquisition gradient echo (MPRAGE) T1-weighted sequence with parameters: repetition time (TR)=1500ms, echo time (TE)=2.83ms, matrix=256x256, field of view (FOV)=256mm x 256mm 2, and 160 one-mm slices without gap and two averages. DTI data were acquired in alignment with the anterior commissure-posterior commissure plane with diffusion sensitizing gradients applied along 32 non-collinear directions with b-value=1000s/mm2, together with an acquisition without diffusion weighting (b-value=0) (TR=7400ms; TE=115ms; matrix=128×128; FOV=256mm × 256mm2 and 40 three-mm slices without gap).
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4

Pulsed ASL with PICORE and Q2TIPS

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Pulsed arterial spin labeled (pASL) sequence with proximal inversion with control for off-resonance effects (PICORE) labeling geometry25 (link) and thin-slice TI1 periodic saturation (Q2TIPS)26 (link) were obtained on a 3 T Siemens Trio MR Scanner (Siemens Medical Systems, Erlangen, Germany). Six slices of 6 mm thickness were acquired with the parameters: TR = 3 s, TE = 13 ms, TI1 = 600 ms, TI2 = 1800 ms, 3.4×3.4×6 mm resolution. A 3D anatomical volume was obtained using a T1-weighted MPRAGE sequence (1×1×1.33 mm resolution, TR/TE/α=2530 ms/3.25 ms/7°). The images were motion corrected and spatially smoothed with a 6-mm Gaussian kernel. The time courses were linearly interpolated. The BOLD time course images were obtained by combining the control images, whereas the perfusion time course images were obtained by iterative pair-wise subtraction of the tag images from the control images. The preprocessing steps above were performed using the FreeSurfer software27 (link).
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5

Functional Neuroimaging of the Brain

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Functional imaging data were acquired at the Department of Psychiatry, Psychotherapy and Psychosomatics of the RWTH Aachen University Hospital on a 3 T Siemens Trio MR Scanner (Siemens Medical Systems, Erlangen, Germany). Echo-planar imaging (EPI) sensitive to blood-oxygen-level-dependent (BOLD) contrast were used (T2*, voxel size: 3.1×3.1×3.1 mm3, distance factor 15%, GAP 0.5 mm, 64×64 matrix, FoV: 200×200 mm2, TR = 2s, TE = 30 ms, α = 76°) with 36 slices covering the entire brain. To avoid magnetic field saturation effects, image acquisition was preceded by 6 dummy scans which were discarded before preprocessing. The resulting 785 volumes per subject were analyzed using SPM8 (http://www.fil.ion.ucl.ac.uk/spm) implemented in MATLAB 2010b (Mathworks, Sherborn, MA). Images were realigned to the first volume. Spatial normalization into MNI space was accomplished by means of the unified segmentation approach [78] (link); an 8 mm FWHM Gaussian kernel was used for smoothing. A 128 Hz high pass filter removed effects of low frequency noise.
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6

Multimodal Brain Imaging of Resting-State

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Using a 3 Tesla Siemens Trio MR Scanner (Siemens Medical Systems, Erlangen, Germany) located at the Department of Psychiatry, Psychotherapy and Psychosomatics of the RWTH Aachen University Hospital, the following sequences covering the entire brain were obtained for each participant: (a) 4 min T1‐weighted MP‐RAGE 3D measurement (TR = 1900, TE = 2.52, TI = 900; α = 9°, FoV = 250 mm2, voxel size: 1 × 1 × 1 mm³, slices = 176); and (b) a 6.2 min T2*‐weighted echo‐planar imaging (EPI) resting‐state condition (TR = 3000, TE = 35, α = 84°, FoV = 192 mm, voxel size: 3 × 3 × 3 mm³, 44 slices, gap 15%, 64 × 64 matrix, repetitions = 124). For the resting‐state condition, participants were asked to relax in the scanner, keep their eyes open and avoid falling asleep.
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7

Intracranial Vessel Imaging with 3T MRI

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All HRMRI studies were performed using a 3T GE DISCOVERY MR 750 (GE Healthcare, Waukesha, WI) or a 3T Siemens Trio MR scanner (Siemens Healthcare, Erlangen, Germany). The parameters of the sequences of the GE and Siemens scanners are presented in Table I in the online-only Data Supplement. The sequences were acquired in coronal or axial view which covered the intracranial culprit vessels.
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8

Neuroimaging Protocol for fMRI Studies

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In Experiments 1 and 2, MR-data were acquired at a 3T Siemens Trio MR-scanner equipped with an 8-channel head-coil. For anatomical coregistration, a T1 weighted image was recorded before the functional imaging (192 sagittal slices, 256 × 256 1 mm isotropic voxels, TR = 2500 ms, TE = 4.77, FA = 7°). The same echo-planar imaging sequence was used for the main experiment as well as for the localizer (34 transversal slices, 3.5 mm isotropic voxels, matrix size = 64 voxels, TR = 2000 ms, TE = 30 ms, flip angle = 80°, interleaved slice acquisition). During the main experiment, 780 volumes were recorded, while the localizer lasted for 330 volumes.
In Experiment 3, MR-data were acquired at a 3 T Philips Achieva dStream MR-scanner equipped with a 32-channel head-coil. For anatomical coregistration, a T1 weighted image was recorded before the functional imaging (192 sagittal slices, 256 × 256 1 mm isotropic voxels, TR = 2300 ms, TE = 4.65 ms, FA = 8°). The same echo-planar imaging sequence was used for the main experiment as well as for the localizer (35 transversal slices, 3 mm isotropic voxels, matrix size = 80 voxels, TR = 2000 ms, TE = 30 ms, flip angle = 90°, ascending slice acquisition). During the main experiment, 14 runs of 97 volumes were recorded, while the localizer lasted for 4 runs of 156 volumes.
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9

Functional MRI Acquisition Protocol

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MRI data were collected with a 3 T Siemens Trio MR scanner using an 8-channel head array coil. Blood oxygen-level dependent (BOLD)-sensitive fMRI used a T2*-weighted gradient echo spiral echo-planar imaging sequence with an echo time of 30 milliseconds, repetition time of 2.49 ms, and a low flip angle of 20° to minimize physiological noise (Gonzalez-Castillo et al., 2011 (link)). A total of 128 brain volumes were acquired in a single fMRI session, each consisting of 42 slices with a slice thickness of 3 mm and a field of view of 192×192 mm using a 64×64 grid. High-resolution 3D structural T1-weighted spin echo images were obtained after the first session of BOLD fMRI (TI=800, echo time =3.93, repetition time =1540 ms, flip angle 9°; 256×256 field of view; 192 slices).
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10

Resting-State and Task-Based fMRI Acquisition

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All the MRI data were acquired on a 3 T Siemens Trio MR scanner with a 12-channel phased-array head coil at the Brain Imaging Center of SCNU. For each subject, the resting-state fMRI (R-fMRI) data were collected by using an echo planar imaging (EPI) sequence with the following parameters: repetition time (TR) = 2,000 ms, echo time (TE) = 30 ms, flip angle = 90°, field of view (FOV) = 224 mm × 224 mm, in-plane matrix size = 64 × 64, slice thickness = 3.5 mm, voxel size = 3.5 mm × 3.5 mm × 3.5 mm, and 32 axial slices. During the R-fMRI scan, the participants were asked to open their eyes to fix a black cross on the screen and lay in the scanner in a supine position. About 180 functional volumes were obtained in a 6 min scan. The T-fMRI data were collected by using the same sequence with the R-fMRI scan. During the T-fMRI scan, the participants were asked to perform a visual creative synthesis task and a control task. Each run included 18 trials and lasted for 770 s (385 TRs; Figure 1IA). Individual high-resolution brain structural images were acquired by using a three dimensional (3D) T1-weighted magnetization-prepared rapid gradient-echo (MP-RAGE) sequence.
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