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7 protocols using anti chromogranin a

1

Multimodal Immunohistochemical Analysis

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Immunohistochemistry was performed on 4.5 µm sections. Sections were de-paraffinized and rehydrated by passing through xylene and a series of ethanols to water. Antigen retrieval was performed by boiling in 10 mM citrate buffer (pH 6.0) for 10 minutes. Endogenous peroxidase activity was blocked with 0.3% hydrogen peroxide for 30 minutes. Sections were then subject to rabbit VECTASTAIN Elite ABC horseradish peroxidase kit following the manufacturers protocols. Sections were developed in DAB for 5 minutes, counterstained in hematoxylin, dehydrated with ethanol, cleared in xylene and mounted in DPX. Primary antibodies; Anti-Ki67 (Thermo Scientific, Fremont, CA, USA; clone: SP6; 1:200), Anti-p-H3 (Merck Millipore, Germany; 06–570: Anti-phospho-Histone H3 (Ser10) Antibody; 1:500), Anti-lysozyme (Life Technologies; A0099), Anti- Chromogranin A (Abcam; ab15160), Anti-CD11b antibody (Abcam; ab133357; 1:4000), Anti-CD3 (Themo Scientific, RM-9107-R7; prediluted), Anti-CD45R (Thermo Scientific, RA3-6B2, 1:100). Alcian blue staining was performed following standard procedures in 1% Alcian blue in 3% acetic acid, pH 2.5.
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2

Immunohistochemical analysis of intestinal endocrine cells

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The paraffin-embedded sections of ileum and colon tissue were prepared and processed for HE as described previously (11 (link)). The ileum and colon tissues pathology of the proband in HE was examined by light microscope (LM) (H500S, Nikon). Immunohistochemical staining of the paraffin-embedded sections was performed according to EnVision system protocol. The sections were incubated with anti-Chromogranin A (1:200, Abcam) and with HRP-labeled secondary antibody (DAKO). The localization and distribution of intestinal endocrine cells were examined under the H500S LM, and the images were processed by Image-pro Plus software, version 9.3 (Media Cybernetics).
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3

Immunohistochemical Analysis of Intestinal Tissues

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The small and large intestines of house musk shrews were both resected 1–2 h after oral administration of the spores and fixed using the Swiss roll method [19 (link)]. Paraffin blocks were sectioned at 5–6 μm thickness and deparaffinized. For immunohistochemical staining, ribbons were rehydrated, with endogenous peroxidases being quenched with 3% H2O2 in methanol for 30 min in the dark. After washing with PBS for 20 min, the ribbons were blocked with 1% bovine serum albumin (Sigma–Aldrich, St. Louis, MO, USA) for 20 min. The ribbons were then incubated with primary antibodies at the following dilutions in blocking buffer: Mouse anti-serotonin (1:250, LSBio, Seattle, WA, USA), anti-c-fos (1:100, Abcam, Cambridge, UK), anti-mast cell tryptase (1:200, Abcam), anti-chromogranin A (1:400, Abcam), and anti-CaMKI (1:50, Abcam). After washing in PBS, the ribbons were incubated with the secondary antibody, horseradish peroxidase-conjugated anti-mouse IgG (1:500, Cell Signaling, Danvers, MA, USA). After washing, the color was developed using a substrate, DAB (3,3′-diaminobenzidine tetrahydrochloride), before being counter-stained with hematoxylin.
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4

Protein Characterization Using Antibodies

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Chromatin immunoprecipitation (ChIP), immunoblotting, immunofluorescence, or immunohistochemistry were performed using the following antibodies: anti-α-SMA (#19245T; Cell Signaling); anti-β-Actin (#64225332; Bio-Rad), anti-amylase (#ab21156; Abcam), anti-chromogranin-A (#ab45179; Abcam), anti-cytokeratin 19 (#ab52625; Abcam), anti-E-cadherin (#3195S; Cell Signaling), anti-glucagon (#2760; Cell Signaling), anti-insulin (#4590; Cell Signaling), anti-JunB (#3753; Cell Signaling), anti-Muc5AC (#ab3649; Abcam), anti-Prdm16 (#ab202344 and #ab106410; Abcam), anti-Smad2 (#5339; Cell Signaling), anti-Smad3, (#9523; Cell Signaling), anti-Smad4, (#46535; Cell Signaling), anti-Smad4 (#sc-7966; Santa Cruz), anti-Smad2/3 (#8685; Cell Signaling), and anti-vimentin (#5741S; Cell Signaling).
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5

Histological Analysis of Xenograft Metastasis

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Tissues were fixed in 10% formalin solution for 24 h and transferred to 70% ethanol. Tissues were paraffin embedded, sectioned and rehydrated. Hematoxylin/eosin and periodic Acid–Schiff staining were performed according to basic procedures. Sections were stained with anti-phospho-Erk1/2 (New England Biolabs, Ipswich, MA), anti-Ki67 (abcam, Cambridge, MA), anti-chromogranin A (abcam, Cambridge, MA), anti-cytokeratin 7 (Invitrogen, Rockford, IL), anti-cytokeratin 19 (Cell Signaling Technology, Danvers, MA) and with Trypsin, Bcl10, Mucin4 from Santa Cruz Biotechnology, Santa Cruz, CA. For each time point, histology of four sections separated by 200 µm from at least three individual animals was evaluated. Metastasis quantification: for each mouse, two lobes of the liver and one lung were sliced and embedded in paraffin. Gross and microscopic examination of H&E stained sections was used to identify the percentage of mice with at least one metastasis to the liver and lung.
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6

Immunophenotyping of ECC Cells

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Each ECC cell was seeded in a Lab‐Tek II chamber slide system (Thermo Fisher Scientific) and fixed with 4% paraformaldehyde in PBS for 10 minutes, blocked for 40 minutes, and incubated with the anti–DLL3 antibody (ab103102 1:500 dilution, Abcam) and anti–chromogranin A (code‐Nr. M 0869 1:250 dilution, DAKO) overnight at 4°C. Then, the results were obtained through the same processes of double fluorescent IHC described above.
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7

Tissue Preparation and Immunohistochemistry

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After being flushed with cold PBS, spleens, livers, or colons were fixed in 4% paraformaldehyde. The fixed tissues were then embedded within the optimal cutting temperature compound and mounted on a chuck in a cryostat for sectioning. The tissues were cut into 10 μm thick frozen sections, which were collected by adhering to slides and stored at −20 °C. BrdU administration and detection were performed as previously described [47 (link)]. Briefly, BrdU labeling (50 mg/kg) (Cat#: B23151, Invitrogen, Waltham, MA, USA) was performed according to our experimental designs. Tissue sections were analyzed using IHC. The following antibodies were used: anti-BrdU (Cat#: ab8152, Abcam, Cambridge, UK), anti-chromogranin A (Cat#: ab15160, Abcam, Cambridge, UK), anti-GFP (Cat#: ab6673, Abcam, Cambridge, UK), anti-CD11b (Cat#: ab133357, Abcam, Cambridge, UK), and anti-caspase 3 (Cat#: CST 9662S, Danvers, MA, USA).
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