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Annexin 5 apc and propidium iodide

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Annexin V-APC and propidium iodide are reagents used for flow cytometry applications. Annexin V-APC is a fluorescent dye that binds to phosphatidylserine, a marker of apoptosis. Propidium iodide is a dye that binds to DNA and is used to assess cell viability. These reagents are commonly used together to identify apoptotic and necrotic cells.

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2 protocols using annexin 5 apc and propidium iodide

1

In vivo and in vitro Viral Infection Assays

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Mice were infected with EMCV by intraperitoneal injection of 2×103 TCID50 of the virus diluted in 100 μl PBS. Mice were sacrificed and heart harvested 48h later, or survival was monitored for 27 days.
For VSV infection, mice were anesthetized with methoxyflurane (Anafane) and 106 PFU of VSV in 50 μl PBS were administered intranasally. The mice were sacrificed 24h later. Blood was collected by cardiac puncture and transferred in heparinized tubes. The samples were then centrifuged (2 minutes at 3000 rpm) and dilutions of the plasma were used for viral titration.
For in vitro infections, cells were plated at a density of 105 cells/ml in 6-well plates. The next day, the cells were infected with VSV-GFP, VSV-DsRed, HSV-2 or EMCV (diluted in 500 μl of DMEM without FBS) for 1h with gentle shaking every 15 minutes. The cells were then washed and incubated in 1 ml of media containing 10% FBS. The dose of virus used for infection and the duration of the incubation are indicated in figure legends. Cell death was measured by flow cytometry after staining with Annexin V-APC and propidium iodide (BD Biosciences) or by LDH release assay (CytoTox 96 assay, Promega).
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2

Annexin V and Propidium Iodide Apoptosis Assay

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Cells were gathered using trypsin and then resuspended in Annexin V binding buffer. 1 × 105 cells in a 100 μL volume were incubated with Annexin V-APC and propidium iodide (BD Biosciences, San Jose, CA, USA) for 15 min at room temperature in the dark. 100 μL of 1x binding buffer was added and fluorescence was detected using FACS Canto II (BD Biosciences). To perform the MTT assay, USP20-depleted, p62-depleted and control HeLa cells were cultured in six-well plates. MTT solution (114650-070-01; Sigma-Aldrich) was added to each well and incubated for 20 m at 37 °C according to the manufacturer’s instruction. The media was discarded and 2 mL of DMSO was subsequently added. Absorbance values at 490 nm were determined by a Bio-Rad 680 microplate reader (Bio-Rad).
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