The largest database of trusted experimental protocols

7 protocols using ifn gamma

1

Cytokine-induced Expression of Inflammatory Genes in Tendon Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
IL-1β and IFNγ respectively induce NF-κB and IFN target genes expressed in diseased shoulder tendon tissues8 11 (link) and were also identified in diseased Achilles tendon tissues in the current study. We therefore investigated if treatment of cultured tendon cells with these cytokines induced more profound expression of SFA markers and NF-κB and IFN target genes in diseased relative to healthy tendon-derived cells. Tendon-derived cells were isolated from healthy hamstring and diseased Achilles tendons using previously described protocols11 (link); passage 1–3 cells were used for all experiments. Cells were grown until 80% confluence prior to stimulation with IL-1β (10 ng/mL, Sigma) or IFN gamma (20 ng/mL, BioLegend) in medium (DMEM F12, Lonza) containing 1% heat-inactivated human serum (Sigma). Non-treated (vehicle only) cells served as experimental controls. After cytokine/vehicle treatment, cells were incubated at 37°C and 5% CO2 for 24 hours until experimental harvest for mRNA or flow cytometry.
+ Open protocol
+ Expand
2

Cytokine Profiling of Human Monocyte Responses to Trypanosoma vivax

Check if the same lab product or an alternative is used in the 5 most similar protocols
Human monocytes isolated by Rosette Sep © negative selection were plated at 5 x 104 cells/ well in 96-well u-bottom plates. Tv was counted, and then reconstituted in complete RPMI media, and rendered dead, but intact as described above. Dead, intact Tv were then added to monocytes, or human monocyte derived macrophages (HMDM) at an MOI (multiplicity of infection) of 1, and allowed to incubate overnight (16 hours). Positive controls were 100 ng/ml LPS (sigma) 10 μg/ml poly (I:C) (Tocris) or 1000 U/ml IFN gamma (Biolegend). Subsequently plates were centrifuged and supernatants were harvested and frozen at -80°C. Supernatants were then thawed on ice and analyzed using Cytometric Bead Array (Becton-Dickenson) for IL-8, IL-6, IL-1β, TNFα, and IL-12 according to the manufacturer’s instructions. IL-6, IL-1β, and IL-12 were multiplexed, and IL-8 was measured separately on supernatants diluted 1:100. Data were analyzed using FlowJo (Treestar) to determine MFI, which was normalized to absolute concentrations according to a standard curve generated using lyophilized protein provided with the kit. IL-23 was measured using Legend Max Human IL-23 (p19/p40) ELISA kit with pre-coated wells (Biolegend) according to the manufacturer’s instructions. Wells were read using a Victor3 1420 plate reader (Perkin-Elmer), and MFI was normalized as described above.
+ Open protocol
+ Expand
3

Flow Cytometric Analysis of Treg Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Foxp3/Transcription Factor Staining Buffer Set, True‐Phos™ Perm Buffer, Cell Staining Buffer, and recombinant human cytokines for in vitro stimulation (IFN‐gamma, interleukin (IL)‐6, IL‐2, IL‐4; all carrier‐free) were purchased from Biolegend.
The following antibodies were used to analyse Tregs via flow cytometry: anti‐CD4 (clone OKT4; APC‐Cy7‐labeled), anti‐CD3 (clone HIT3a; PE‐Cy7) anti‐CD25 (clone M‐A251; PerCP‐labeled), anti‐CD127 (clone A019D5; BV‐421‐labeled), anti‐Foxp3 (clone 206D; AlexaFluor647‐labeled), anti‐CD39 (clone A1; FITC‐labeled), and isotype controls (all from Biolegend). STAT activation was studied using commercially available PE‐labeled antibodies against phospho‐STAT1 (clone A17012A.Rec), phospho‐STAT3 (clone 13A3‐1), phospho‐STAT5 (clone A17016B.Rec), and phospho‐STAT6 (clone A15137E) (all Biolegend).
+ Open protocol
+ Expand
4

IFN-gamma Induction of H2-kD Expression

Check if the same lab product or an alternative is used in the 5 most similar protocols
Active mouse IFN-gamma was sourced from Abcam (Cat#ab9922) and reconstituted in sterile water, as per the manufacturer’s instructions. Subclones (IE1 and IE2) and the parental 4T1 cell line were grown in a 24-well plate until ~70% confluence was achieved. Cells were then treated with IFN-gamma (100 ng/ml) for 24 h. Cells were stained with Alexa Fluor488 conjugated anti-mouse H2-kD (Biolegend, clone SF1-1.1, cat#116610, 1:200) at a concentration of 1:200 in FACS buffer for 20 min. Cells were washed three times before being stained with DAPI. Data were generated using the BD FCSCanto II flow cytometer with BD FACSDIVA software (v8.0.1). Analysis was carried out using FlowJo (version 10.6.1) and the median fluorescence intensity of live single cells was calculated.
+ Open protocol
+ Expand
5

Quantifying Interferon-Stimulated Genes

Check if the same lab product or an alternative is used in the 5 most similar protocols
All cytokine stimulations were performed as indicated with IFN-α 2b (Intron-A) or IFN-gamma (570202; BioLegend) in complete DMEM. RNA was extracted from U6A cells, hTERT-immortalized fibroblasts (Qiagen RNeasy) or whole blood (PAXgene Blood RNA Kit) and reverse-transcribed (ABI High Capacity Reverse Transcription). The expression of ISGs (IFIT1, MX1, RSAD2, IFI27, and ISG15), relative to the 18S housekeeper gene, was analyzed by TaqMan quantitative real-time PCR (TaqMan Universal Master Mix II with uracil-DNA glycosylases) on a Roche LightCycler 480 II. The relative levels of ISG expression were calculated by the ΔΔCT method, relative to the mean values for the mock-treated controls or healthy donor.
+ Open protocol
+ Expand
6

Comprehensive Immune Profiling by Flow Cytometry

Check if the same lab product or an alternative is used in the 5 most similar protocols
Flow cytometry was performed with Life Attune Nxt FACS machine (Life Technology/Thermo Fisher Scientific, Waltham, MA). Fluoro-chrome conjugated anti-mouse CD45 (30-F11, Biolegend), CD3 (145–2C11, eBioscience), CD4 (RM4-5, eBioscience), CD8 (eBioH35-17.2, eBioscience), Foxp3 (FJK-16s, eBioscience), Ki-67 (SolA15, eBioscience), Granzyme B (NGZB, eBioscience), Ly-6C (AL-21, Biolegend), Ly-6G (1A8, Biolegend), mPD-L1 (10 F.9G2, Biolegend), hPD-L1 (29E.29A3, Biolegend) and IFN-gamma (XMG1.2). Granzyme B and IFN-gamma staining was performed with intracellular staining kit from BD Bioscience. While Ki-67 and Foxp3 staining was done with nuclear protein staining kit from eBioscience (San Diego, CA). FACS data were analyzed using FlowJo software (Tree Star, Ashland, OR).
+ Open protocol
+ Expand
7

Quantifying Immune Biomarkers in Serum

Check if the same lab product or an alternative is used in the 5 most similar protocols
25-Hydroxy [25(OH)D] and the cytokines (IL10, TNF-alpha, IF-gamma) were purchased from Biobase Biotech (Jinan) Co., Ltd, China, and Biolegend Co., Ltd USA respectively. The reagent from Biobase Biotech (Jinan) Co., Ltd, China, and Biolegend Co., Ltd USA whose basic principle is enzyme linked immunosorbent assay (ELISA) were employed to determine the concentrations of 25(OH)D and IL10, TNF-alpha, IFN-gamma respectively of all the study participants as stated by the producer’s protocol. Their various absorbances were then measured spectrophotochemically using Inqaba biotec ELISA plate reader (Inqaba Biotechnical Industries (Pty) Ltd, South Africa).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!