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Base medium

Manufactured by Agilent Technologies
Sourced in United States

Base medium is a liquid or solid substrate that provides essential nutrients and growth factors for the cultivation of microorganisms, cells, or tissues in a laboratory setting. It serves as a foundation for various biological experiments and analyses.

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16 protocols using base medium

1

Evaluating Cellular Metabolism Using Seahorse

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Cells were grown on Seahorse 96-well plates (24,000 cells/well) for 24 h. Cells were washed and incubated in base medium (Agilent Technologies, Les Ulis, France) at 37 °C for 1 h. Extracellular Acidification Rate (ECAR) and Oxygen Consumption Rate (OCR) were measured in real-time with Glycolysis Stress Test Kit and Mito Stress Test Kit respectively using the Seahorse XFe96 Analyser (Agilent Technologies, Les Ulis, France) following manufacturer’s instructions. Data were normalized by protein content that was measured by the DC™ Protein Assay (BIO-RAD, Marnes La Coquette, France).
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2

Measuring Osteoblast Oxygen Consumption

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The oxygen consumption rate (OCR) of MC3T3‐E1 osteoblastic cells was measured with a Seahorse XFe24 analyzer (Agilent Technologies). The cells were seeded on a cell culture microplate for XFe24 Analyzer at a density of 20 000 cells/well the day before the experiments. On the test day, the medium was replaced with a commercially available Base Medium (Agilent) supplemented with 10 mM glucose, 1 mM pyruvate, and 2 mM glutamine. The OCR was measured following the manufacturer's instructions of the Seahorse XF Cell Mito Stress Test Kit (Agilent). The respiratory rates are reported as oxygen flux per 10 000 cells (pmol O2/min/cell*104).
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3

Mitochondrial and Glycolytic Profiling of HK-2 Cells

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The seahorse Bioscience X96 extracellular flux analyzer (Agilent Technologies) was used to measure the rate change of dissolved O2 in the medium that immediately surrounded adherent cells cultured in the XF96 V3 cell culture microplate (Seahorse Bioscience). Then, HK-2 cells, which were cultured in RPMI 1640 supplemented with 0.5% FBS, were seeded in the XF96 V3 cell culture microplate at 0.8 × 104 cells per well. Afterwards, these cells were washed and incubated in the base medium (Agilent Technologies) at 37 °C for one hour. The oxygen consumption rates (OCR, pmol.min-1) was measured in real-time using a mitochondria stress test kit, according to manufacturer’s instructions. Sequential compound injections, including oligomycin A (1 μM), FCCP (1 μM) and Rotenone/antimycin A (0.5 μM), were applied on the microplate to test the glycolytic activity. The extracellular acidification rates (ECAR) were measured in real-time using a glycolysis stress test kit, according to manufacturer’s instructions. Sequential compound injections, including glucose (25 mM), oligomycin A (1 μM) and 2-DG (50 mM), were applied on the microplate to test the glycolytic activity.
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4

Metabolic Profiling of Microglia under Inflammatory Conditions

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BV2 and B6M7 cells were seeded in XFe 96-well microplates (6000 cells/well) (Agilent Technologies, Sana Clara, USA) with/without 5 μM STF31 (C23H25N3O3S, Millipore, Watford, UK) for 24 h, followed by LPS + IFNγ (both 100 ng/ml) or IL-4 (20 ng/ml) stimulation for a further 24 h. Cells were washed and incubated in base medium (Agilent Technologies) at 37 °C for 1 h. Extracellular Acidification Rate (ECAR) and Oxygen Consumption Rate (OCR) were measured in real-time with Glycolysis Stress Test Kit and Mito Stress Test Kit respectively using the Seahorse XFe96 Analyser (Agilent Technologies) following manufacturer’s instructions. Data were normalized by cell numbers that was measured by the YO-PRO®-1 Assay (Thermo Fisher Scientific).
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5

Quantifying Cellular Glycolysis and OXPHOS

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To evaluate the glycolysis and OXPHOS levels, 661 W cells were plated onto Seahorse 96‐well plates. Cells were transfected with Hk2 siRNAs or negative control siRNAs before being washed and incubated in the base medium (Agilent Technologies) at 37°C for 1 h. ECAR and OCR were measured by glycolysis stress tests and mitochondria stress tests on seahorse Bioscience X96 extracellular flux analyzer (Agilent Technologies) according to the manufacturer's instructions, serving as quantitative indicators for cellular glycolysis and OXPHOS levels, respectively.34
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6

Metabolic Profiling of Cellular Bioenergetics

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CAFs and NFs were seeded in XFe 96-well microplates (12,000 cells/well) (Agilent Technologies, Sana Clara, USA). Cells were washed and incubated in base medium (Agilent Technologies) at 37 °C for 1 h. Then, extracellular acidification and oxygen consumption rates (extracellular acidification rate (ECAR) and oxygen consumption rate (OCR), respectively) were measured in XF media (nonbuffered RPMI 1640 containing 10 mM glucose, 2 mM L-glutamine, and 1 mM sodium pyruvate) under basal conditions and in response to 1 μM oligomycin, 1.5 μM fluorocarbonyl cyanide phenylhydrazone (FCCP), and 0.5 μM rotenone + 1 mM antimycin A by using the Seahorse XFe96 Analyzer (Agilent Technologies) according to the manufacturer’s instructions.
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7

Mitochondrial Respiration in PBMCs

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PBMCs were resuspended with base medium (Agilent Technologies, USA), and centrifuged at 200 g to obtain a monolayer of the cells. Then, the cells were subjected to an extracellular flux analyzer, where a series of mitochondrial oxidative phosphorylation complex inhibitors were added as previously described22 (link). Basal respiration, ATP production, maximal respiration, spared respiratory capacity, % coupling efficiency, proton leak, and non-mitochondrial respiration were analyzed automatically using the Wave program (Agilent Technologies, USA).
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8

Mitochondrial Respiration Profiling in Cells

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OCR was assessed using the Seahorse XF96 Extracellular Flux Analyzer (Agilent Technologies). Cells were seeded quadruplicately in cell culture microplates (Agilent Technologies, Santa Clara, CA, USA) and treated with control or HP for 24 h. One hour prior to the assay, the culture medium was replaced by base medium (Agilent Technologies) supplemented with 1 mM sodium pyruvate, 2 mM glutamine, and 10 mM glucose (Agilent Technologies), and then cells were incubated at 37 °C without CO2. After three basal respiration measurements without additives, the ATP synthase inhibitor (1 μM oligomycin) was added, followed by subsequent mitochondrial uncoupler (1 μM FCCP), and complex I and III inhibitors (1 μM rotenone and 1 μM antimycin A), respectively. Three separate measurements were recorded after the reagents (all bought from Agilent Technologies) were injected.
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9

Mitochondrial Function Evaluation of GFP-NSCs

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GFP-NSCs and mms6-GFP-NSCs were treated with/without ferric citrate (320 μM) for 2 weeks. These treated cells were then seeded in XFe 96-well microplates (6,000 cells/well) (Agilent Technologies, Santa Clara, CA, USA) overnight. Cells were washed and incubated in a base medium (Agilent Technologies) at 37°C for 1 h. The oxygen consumption rate (OCR) was measured in real time with a Mito Stress Test Kit using a Seahorse XFe96 Analyzer (Agilent Technologies) following the manufacturer’s instructions. Data were normalized by cell numbers that were measured by a YO-PRO®-1 Assay (Thermo Fisher Scientific).
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10

Metabolic Profiling of Glioblastoma Cells

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Transfected U87 and U251 cells were seeded in XFe 96-well microplates (5×103 cells per well) (Agilent Technologies, Sana Clara, USA) for 24 h. Cells were rinsed and incubated in base medium (Agilent Technologies) at 37 °C for 1 h. The extracellular acidification rate (ECAR) and oxygen consumption rate (OCR) were measured in real time with a Glycolysis Stress Test Kit and Mito Stress Test Kit, respectively, using a Seahorse XFe96 Analyzer (Agilent Technologies) following the manufacturer’s instructions. Data were normalized by the cell number.
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