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2 protocols using anti total egfr

1

Western Blot Protein Detection Protocol

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Protein expression was detected by western blotting, as previously described64 (link). Briefly, for cell lysis, RIPA buffer containing protease and phosphatase inhibitors was used. Proteins were separated by SDS–polyacrylamide gel electrophoresis electrophoresis, transferred to a PVDF membrane and detected with the cognate antibody. The following antibodies were used: anti-Pan Actin (1:10,000; Neomarkers, Fremont, CA); anti-total EGFR (1:1,000; sc-03, Santa Cruz, Dallas, TX); anti-pEGFR (1:1,000; ab5644, Abcam, Cambridge, MA); anti-HA tag (12CA5) (11 583 816 001, Roche, Germany). The anti-Rab7A (1:6,000; #R8779), anti-FLAG tag (1:10,000; #F1804) and anti-Tubulin (1:5,000; #T9026) antibodies were from Sigma-Aldrich (St Louis, MO). The anti-FLCN antibody (1:3,000; #3697), anti-pERK (1:2,000; #4370 and 1:2,000; #9101), anti-pS6 (1:2,000; #5364), anti-HA (1:2,000; #3724), anti-pMET (1:1,000; #3129), total MET (1:1,000; #3148) and IgG control (#3900) antibodies were from Cell Signaling Technology (Danvers, MA). Western blots were developed using the Bio-Rad ChemiDoc system and densitometry was analysed with BioRad Image Lab Software (Bio-Rad Laboratories, Hercules, CA). Uncropped scans of the most important blots are contained in Supplementary Fig. 6.
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2

Immunoblotting analysis of EGFR and E7 proteins

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Cells were washed twice with phosphate buffered saline (PBS) before being lysed on ice for 40 minutes with lysis buffer containing 50 mmol/L HEPES buffer, 150 mmol/L NaCl, 1 mmol/L EDTA (pH 8.0), 1 mmol/L EGTA (pH 8.0), 1% IGEPAL CA-630, 0.5% Triton X-100, 10 mmol/L NaF, 2 mmol/L Na3VO4, 10 mmol/L β-glycerophosphate, and 1% protease inhibitor cocktail (Sigma-Aldrich, St. Louis, MO). The lysate was centrifuged at 16,000 × g at 4°C for 10 minutes. Ten to fifty micrograms of total protein for each sample were separated by 8%~12% SDS-PAGE and transferred onto an Immobilon membrane (Millipore Inc, Billerica, MA.), and the desired proteins were probed with corresponding antibodies. Mouse anti-HPV16 E7 (1:1000 dilution) and anti-total EGFR (1:1000) were purchased from Santa Cruz, mouse anti-human actin (1:10000 dilution) from Sigma, anti-β catenin antibody from BD Pharmingen (San Jose, CA), and anti-phospho EGFR (tyrosine 1173) antibody from Cell Signaling (Danvers, MA). Horseradish peroxidase– conjugated secondary anti-mouse and anti-rabbit IgG (H+L) were obtained from Promega. Bound antibody was detected using the SuperSignal West Pico Chemoluminescence system (Pierce, Inc. Rockford, IL).
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