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Clarithromycin

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Clarithromycin is a macrolide antibiotic used in the laboratory setting. It inhibits bacterial protein synthesis by binding to the 50S ribosomal subunit, preventing the translocation of peptidyl-tRNA from the A-site to the P-site during translation. This action leads to the inhibition of bacterial growth.

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12 protocols using clarithromycin

1

Antimicrobial Susceptibility Testing of H. pylori

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There are no accepted standardized methods for testing H. pylori antimicrobial susceptibilities and the protocols used in this study were based on recently published guidelines [16 ] and also those of Performance Standards for Antimicrobial Susceptibility Testing- Clinical and Laboratory Standards Institute - NCCLS, 2007 [17 ]. Briefly, bacterial suspensions were adjusted to the 0.5 McFarland standard (equivalent to 1–2 × 108 cfu/ml) and were used to inoculate Muller Hinton agar plates (Merck, Germany). Antimicrobial disks (ampicillin (10 μg), levofloxacin (5 μg), metronidazole (5 μg), clarithromycin (2 μg), amoxicillin (10 μg), streptomycin (10 μg), cefsulodin (30 μg), erythromycin (5 μg), tetracycline (30 μg), trimethoprim (25 μg), furazolidone (1 μg), rifampin (30 μg), and spiramycin (100 μg) (Oxoid, UK)) were applied and the plates were incubated under microaerophilic conditions at 35 °C for 16–18 h. The zones of growth inhibition produced by each antibiotic were measured and interpreted by standard procedure. Reference strains NCTC 13206 (CCUG 38770) and NCTC 13207 (CCUG 38772) were included as quality controls [18 (link)].
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2

Antibiotic Disk Diffusion Assay

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Chemicals and solvents used in all experiments were of analytical grade. Solvents, including ethanol (EOH) and Dimethyl sulfoxide (DMSO), were purchased from LABCHEM (USA) and Fisher chemical (UK), respectively. Sterile blank disks of 6-mm diameter and disks with standard antibiotics (clarithromycin 15 μg, metronidazole 5 μg, ciprofloxacin 5μ g, and tetracycline 30 μg) were purchased from Oxoid (UK).
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3

Antibiotic Resistance Profiling of H. pylori

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Mueller–Hinton agar (Merck, Germany) was applied to assess the pattern of antibiotic resistance using the simple disk diffusion technique. Antibiotic resistance profile of H. pylori bacteria was researched toward dissimilar antibiotic agents (Oxoid, UK) using the guidelines of the Clinical and Laboratory Standards Institute (CLSI).19 ,20 Resistance patterns of bacteria were experienced toward levofloxacin (5 µg), ampicillin (10 µg), clarithromycin (2 µg), metronidazole (5 µg), streptomycin (10 µg), amoxicillin (10 µg), cefsulodin (30 µg), tetracycline (30 µg), erythromycin (5 µg), furazolidone (1 µg), trimethoprim (25 µg), rifampin (30 µg), and spiramycin (100 µg) (Oxoid). Positive controls (NCTC 13206 (CCUG 38770) and NCTC 13207 (CCUG 38772)) were accompanied in this experiment.
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4

Antibiotic Susceptibility Testing of Clinical Isolates

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The susceptibility of the clinical isolates to ten (10) antibiotics, including oxacillin (1 µg), cefoxitin (30 µg), amoxicillin-clavulanic (20/10) µg, ertapenem (30 µg), vancomycin (30 µg), amikacin (10 µg), erythromycin (15 µg), azithromycin 15 µg, clarithromycin 15 µg, and ciprofloxacin (5 µg) (Oxoid, UK), were evaluated by agar disk-diffusion method on Muller-Hinton agar plates, as recommended by Clinical and Laboratory Standard Institute (CLSI) [15 ].
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5

Antibiotic Susceptibility Testing Protocol

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Susceptibility testing was performed using the disc diffusion (modified Kirby Bauer) method (Biemer, 1973 (link)) for the following antibiotics (Oxoid, UK); Ampicillin (AM 10 µg), Cefotaxime (CTX 30 µg), Amikacin (AK 30 µg), Cefoxitin (FOX 30 µg), Amoxicillin + Clavulanic Acid (AMC 20 + 10 µg), Ceftriaxone (CRO 30 µg), Ciprofloxacin (CIP 5 µg), Clarithromycin (CL 15 µg), Ceftazidime (CAZ 30 µg). The results were inferred according to Clinical and Laboratory Standards Institute (CLSI) guidelines (CLSI 2013).
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6

Antimicrobial Resistance Patterns of Mycoplasma and Ureaplasma

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Patterns of antimicrobial resistance were studied using the simple disk diffusion technique. The Mueller–Hinton agar (Merck, Germany) medium was used for this purpose. Antibiotic resistance of M. hominis and U. urealyticum strains against 11 commonly used antibiotics, including tetracycline (30 µg/disk), clindamycin (2 µg/disk), doxycycline (30 µg/disk), pefloxacin (5 µg/disk), ofloxacin (5 µg/disk), erythromycin (15 µg/disk), clarithromycin (2 µg/disk), azithromycin (15 µg/disk), Josamycin (30 µg/disk), ciprofloxacin (5 µg/disk), and pristinamycin (15 µg/disk) antibiotic agents (Oxoid, UK) were analyzed using the Clinical Laboratory Standard Institute protocol (CLSI) (14 ). M. hominis ATCC 23114 and U. urealyticum ATCC 27618 were also used as positive controls.
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7

Antimicrobial Susceptibility Changes with ABS

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One percent ABS was added to all strains and antimicrobial susceptibility was held at 30 and 60 min of application. Clarithromycin (CT 1623, Oxoid, England), Metronidazole (CT 0067, Oxoid, England), Tetracycline (CT 0054, Oxoid, England), and Amoxicillin (CT0161, Oxoid, England) discs were used to determine susceptibility changes. The following reference strains are used: Staphylococcus aureus ATCC® 25923, Escherichia coli ATCC® 25922, Pseudomonas aeruginosa ATCC® 27853, Haemophilus influenza ATCC® 49247, Neisseria gonorrhoeae ATCC® 49226, Streptococcus pneumoniae ATCC® 49619, Escherichia coli ATCC® 35218 and H. pylori ATCC 43504. Results were evaluated using the EUCAST 2016 breaking points. Informed consent was not taken for the reason that people are not included at this step.
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8

Antibiotic Susceptibility of Probiotic Isolates

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The antibiotic susceptibility of selected probiotic isolates was determined by the agar disc diffusion method [26 (link)]. The following antibiotics were tested in the form of discs: bacitracin (10 µg) (HiMedia), cefpirome (30 µg) (Oxoid), chloramphenicol (30 µg) (Oxoid), clarithromycin (15 µg) (Oxoid), penicillin (10 µg) (Oxoid), sulfamethoxazole/trimethoprim (STX) (25 µg) (Oxoid), tetracycline (30 µg) (Oxoid), and vancomycin (30 µg) (Oxoid). The plates were incubated at 30 °C for 24 h under limited oxygen and aerobic conditions for LAB and yeast, respectively, and diameter of the inhibition zones was measured by using vernier caliper.
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9

Antimicrobial Activity of CBD against H. pylori

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The antimicrobial ability of CBD was tested by the disk agar diffusion method. The CBD extract was dissolved in phosphate buffered saline (PBS) and impregnate 6-mm blank paper disks. As positive controls, we used 2 μg of amoxicillin or clarithromycin (Oxoid, UK). The disks were placed on plates that had been spread with brucella agar (Difco) containing 10% FBS and top coated with 0.1 mL of H. pylori suspension at OD600 6.0. The plates were incubated in 10% CO2 at 37°C and 100% humidity for 48 h. The diameter of the inhibition zone was recorded for each H. pylori strain.
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10

Preparation and Storage of Antimicrobial Agents

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For in vitro studies, AZM, colistin sulfate, and ciprofloxacin were purchased from Sigma-Aldrich; erythromycin and clarithromycin were purchased from Fischer Scientific. Stock solutions were prepared in phosphate buffered saline (PBS) at 2560 mg/L for the macrolide antibiotics, 1000 mg/L for colistin, and 10,000 mg/L for ciprofloxacin. Trace amounts of glacial acetic acid were used to prepare AZM, erythromycin and clarithromycin stocks for complete solubility (Barry et al., 2004 (link)). LL-37 and TAMRA-tagged LL-37 were purchased from the American Peptide Company; stock solutions were prepared in molecular quality water (Corning Cellgro) at 640 μM and 320 μM, respectively, and stored at − 80 °C. For in vivo studies, AZM for human injection (Sagent Pharmaceuticals) was reconstituted per manufacturer's guidelines (AZM Package Insert, 2013 ). Pooled human serum was obtained from six healthy consented lab volunteers under a protocol approved by the UCSD Human Research Protection Program and immediately aliquoted and stored at − 80 °C.
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