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46 protocols using albendazole

1

Malaria Compound Screening and Analog Synthesis

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Medicines for Malaria Venture (MMV, Geneva, Switzerland) provided the PRB, which contains compounds dissolved in 10 μL of DMSO at a concentration of 10 mM for inclusion. 2 μL of the stock compounds were transferred to new plates containing 3 μL DMSO to generate 4 mM stocks. For retesting, the individual solid compounds of MMV1006203, MMV1593539, MMV1634497 and MMV1782387 were provided by the MMV. The analog compounds of albendazole, thiabendazole, carbendazim, oxfendazole, mebendazole, fenbendazole, flavone and displurigen were purchased from MilliporeSigma. Stocks of all compounds were stored at -80°C.
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2

Natural Product Libraries Screening

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Natural Product Libraries (Authentic & Pilot) and related derivatives used in preliminary screens were provided by the RIKEN Natural Product Depository (NPDepo). Identified hit compounds were purchased from Vitas-M for retesting. NPD8790 analogs were purchased from ChemBridge Corporation and Vitas-M. Wact-11 (6222549) was purchased from ChemBridge Corporation. Rotenone, antimycin A, potassium cyanide, albendazole, mebendazole, thiabendazole, and fenbendazole were purchased from MilliporeSigma. Siccanin was purchased from Cayman chemical. Chemical stock solutions were made for each compound by dissolving a weighed amount of chemical into a measured volume of sterile solvent (DMSO, ethanol, or water depending on compound solubility), stock solutions were then sterile filtered using 0.2-micron filters when appropriate. All stock solutions were stored at −20 °C prior to use apart from KCN, which was prepared fresh before each experiment.
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3

Enzyme-mediated Drug Metabolism Assay

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FLU was purchased from Janssen Pharmaceutica (Prague, Czechia). Recombinant human carbonyl reductase 1 (CBR1) was obtained from MyBioSource (San Diego, CA, USA). Albendazole, menadione (MEN), luteolin (LUT), DOX, reduced nicotinamide adenine dinucleotide phosphate (NADPH), and NADPH, were purchased from Sigma-Aldrich (Prague, Czechia). All other chemicals used were of HPLC or analytical grade.
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4

Navitoclax Drug Screening Protocol

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Navitoclax was synthesized at AbbVie, Inc. (North Chicago, IL). FDA-approved drug library was purchased from Enzo (Farmingdale, NY). Albendazole, mebendazole, oxibendazole, and oxfendazole were purchased from Sigma (St. Louis, MO). All siRNA pools were purchased from Dharmacon (Lafayette, CO). Noxa antibody was purchased from Abcam. Bim and Mcl-1 antibodies were purchased from Epitomics (Burlingame, CA). Caspase 3 and caspase 9 inhibitors were purchased from SantaCruz Biotechnology (Santa Cruz, CA). All the branched DNA reagents were purchased from Affymetrix (Santa Clara, CA).
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5

Albendazole-Mediated Cell Synchronization

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Two approaches for cell synchronization were tested: the starvation [42 (link)] and the albendazole-dependent [43 (link)] methods. Both methods provided the same results concerning the mitosomal dynamics. However, the albendazole treatment had a much greater effect on cell synchrony and therefore was used in the study. Trophozoites from the late log phase were incubated in growth medium supplemented with 100 ng/mL of albendazole (Sigma-Aldrich, St. Louis, MO, USA) for 6 h at 37 °C [43 (link)]. After incubation, the albendazole-affected unattached cells were discarded and the unaffected adherent pre-mitotic cells were washed twice with pre-warmed, fresh, drug-free medium and then detached from the tube by cooling on ice for 10 min. The cells were then allowed to proliferate on slides in the drug-free conditions for 9–14 min, fixed, and permeabilized as described below.
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6

Anti-Parasitic Compounds from Natural Sources

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An overview of the tested plant extracts and compounds is provided in Table 1. Levamisole, albendazole, trans-cinnamaldehyde, dimethyl sulfoxide (DMSO), RPMI-1640 media and α-linolenic acid were obtained from Sigma-Aldrich (Stellenborsch, Germany). Grape seed extract, consisting of >95% condensed tannins [35 (link)], was purchased from Bulk Powders (Colchester, UK). A chicory (Cichorium intybus) extract (cv. Spadona) enriched in sesquiterpene lactones was prepared as previously described [36 (link)]. Four different seaweed extracts were produced as described by Bonde et al. [24 (link)]. Briefly, Saccharina latissma was sourced from either Grenå, Denmark, or the Faroe Islands. From each source location, extracts were prepared using water and methanol (polar extracts; SW1, SW2), or dichrolormethane and methanol (non-polar extracts; SW3, SW4). The chemical composition of the extracts has previously been reported [24 (link)].
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7

Culturing Human Squamous Cell Carcinoma

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SCC12 and SCC13 cells are the human squamous cell carcinoma line, established from SCCs of the facial epidermis [14 (link)]. Both the cells were maintained in Dulbecco's modified Eagle's medium (DMEM) supplemented with 5% fetal bovine serum (FBS) and antibiotics (Life Technologies Corporation, Grand Island, NY) at 37°C, 5% CO2 atmosphere. Cells were routinely passaged with 1:5 ratio when they grew to nearly confluent. Normal human epidermal keratinocytes were isolated from skin specimens obtained in accordance with the ethical committee approval process of Chungnam National University Hospital. Specimens were briefly sterilized in 70% ethanol, minced, and then treated with dispase overnight at 4°C. The epidermis was separated and placed in a solution containing 0.05% trypsin and 0.02% EDTA (Life Technologies Corporation) for 15 min at 37°C. After vigorous pipetting, cells were pelleted and resuspended in keratinocyte-serum free medium (K-SFM) supplemented with bovine pituitary extract and recombinant human epidermal growth factor (Life Technologies Corporation). Albendazole and 4-phenylbutyric acid (4-PBA) were purchased from Sigma-Aldrich (St. Louis, MO) and dissolved in dimethyl sulfoxide (DMSO).
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8

Anthelmintic Compounds Preparation and Assays

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Albendazole and ivermectin stock solutions were prepared with dimethyl sulfoxide (DMSO) (Fisher Scientific, Catalog # D1281). Albendazole (Sigma-Aldrich, Catalog # A4673–10G) was used at a concentration of 1.25 μM in the competitive fitness and brood size assays and 30 μM in the HTA. ivermectin (Sigma-Aldrich, Catalog # I8898–1G) was used at a concentration of 1.5 nM in the competitive fitness and brood size assays and 250 nM and 500 nM in the HTA. Anthelmintic stock solutions were prepared, aliquoted, and stored at −20°C for use in the assays (Table S4). Anthelmintic stock concentrations, companies, and details for the wild strain HTA are documented in Methods, Wild Strain HTA and Spearman rank-order correlations.
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9

Albendazole Treatment against Microsporidial Parasites

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Albendazole (Sigma Cat#: 54965-21-8) was diluted in dimethyl sulfoxide (DMSO) to a 10 mg/ml stock solution, kept at -20 °C, and further diluted with appropriate media to the different concentrations used during the experiments. The starting concentration, 5 μg/ml, was based on treatment reports of other microsporidial parasites (Didier 1997 (link); Franssen et al. 1995 (link)). The concentrations used in this study were selected from dilutions of the starting dose (5 μg/ml) and optimized for both infection and cell viability. Control cultures were maintained in mock media containing DMSO at the same concentrations used for Albendazole treatment. Both Albendazole and mock media were maintained continuously for the time required by each experiment.
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10

Albendazole-Induced Apoptosis Mechanisms

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Albendazole (ABZ), 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT), Tris base, glycine, NaCl, sodium dodecylsulfate (SDS), and bovine serum albumin (BSA) were purchased from Sigma-Aldrich (St. Louis, MO, USA). LightShift® Chemiluminescent EMSA kit and Trizol were purchased from Thermo Fisher Scientific Inc. (Waltham, MA, USA). FITC Annexin V Apoptosis Detection Kit was purchased from BD Pharmingen™ (BD Biosciences, Becton-Dickinson, Franklin Lakes, NJ, USA). TUNEL (terminal transferase mediated dUTP-fluorescein nick end labeling) assay kit was from Roche Diagnostics GmbH (Mannheim, Germany). Anti-p-STAT3(Tyr705), anti-p-STAT5 (Tyr694/Tyr699), anti-p-JAK1 (Tyr1022/1023), anti-JAK1, anti-p-JAK2 (Tyr1007/1008), anti-JAK2, anti-p-Src (Tyr416), anti-Src, anti-Cleaved caspase3, and anti-Cyclin D1 antibodies were purchased from Cell Signaling Technology (Beverly, MA, USA). Anti-STAT3, anti-PTPε, anti-SHP-1, anti-Procaspase-3, anti-PARP, anti-Bcl-2, anti-Bcl-xL, anti-Survivin, anti-Cyclin D1, anti-COX-2, anti-β-actin antibodies, and SHP-1 siRNA were purchased from Santa Cruz Biotechnology (Santa Cruz, CA, USA).
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