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11 protocols using rag1 deficient mice

1

Conditional Gene Knockout Mice Maintenance

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Mice were housed under specific pathogen–free conditions and used in accordance with the Duke University Institutional Animal Care guidelines. Maf floxed allele mice (Maffl/fl) were obtained from C. Birchmeier (Max-Delbrück Center for Molecular Medicine, Berlin, Germany; Wende et al., 2012 (link)) and were backcrossed to C57BL/6 for at least five generations. Il7rCre mice were obtained from H.R. Rodewald (German Cancer Research Center, Heidelberg, Germany; Schlenner et al., 2010 (link)). The following commercially available strains were bred in our facility: C57Bl/6 mice (Taconic), Rag2−/−Il2rg−/− mice (stock 4111; Taconic), Rorc-Cre mice (stock 022791; Jackson), Rorc(t)GFP mice (stock 007572; Jackson), Rosa26ZS-green (stock 007906; Jackson), Tbx21 floxed allele mice (stock 022741; Jackson), and Rag1-deficient mice (stock 002216; Jackson). Adult mice were used at the ages of 8–16 wk. Littermate controls were used.
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2

Mice Pathogen-Free Experiments

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C57BL/6J and Balb/c mice raised under specific pathogen-free conditions were purchased from CLEA Japan. Rag1-deficient mice, μMT mice, and CD103-deficient mice were purchased from the Jackson Laboratory (Bar Harbor, ME, USA). Mice between 8 and 12 weeks of age were used for the experiments. All the experiments were performed in accordance with the guidelines of the animal ethics committee of the University of Tsukuba Animal Research Center (permission number: #22–237).
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3

Murine Model for Immune Regulation

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C57BL/6J mice raised under specific pathogen-free conditions were purchased from CLEA Japan (Tokyo, Japan). IFN-γ deficient mice, Rag1-deficient mice, and homozygous CD19-Cre transgenic mice were purchased from the Jackson Laboratory (Bar Harbor, ME, USA). Mice between 8 and 12 weeks of age were used for the experiments. All the experiments were performed in accordance with the guidelines of the animal ethics committee of the University of Tsukuba Animal Research Center (permission number: #17-145). All works using human samples were approved by the institutional review board of the University of Tsukuba (permission number: H28-1).
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4

Transgenic Mouse Models for Stat5 and Bcl6

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Mice with deletion of the entire Stat5A/5B locus (Stat5−/−) and mice with the entire Stat5A/5B locus gene flanked with loxP sites (Stat5fl/fl) were used69 (link). The Stat5fl/+ mice were bred with Stat5+/− mice to generate Stat5fl/− mice. CD8Cre transgenic mice, IgHEL (C57BL/6, MD4), sHEL (C57BL/6, ML5) transgenic mice, BM1 mice, Rag1-deficient mice, CD45.1 congenic mice, CXCR5-deficient mice, PD-1-deficient mice, Lag3-deficiect mice and CD40-deficient mice were obtained from the Jackson Laboratory. Bcl6fl/flCD4Cre mice were also used70 (link). Mice were housed in the SPF animal facility at the Medical College of Wisconsin, the animal experiments were performed using protocols approved by the Institutional Animal Care and Use Committee.
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5

Foxp3-Deficient Mice for Immunology Research

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Foxp3ΔEGFP (FoxP3- deficient) and Foxp3EGFP mice were the gift of Dr. Talal Chatila (Harvard University). CD4-deficient and IL-10-deficient mice on a C57BL/6 genetic background, wild-type C57BL/6, and Rag1-deficient mice were purchased from Jackson Laboratory. Experimental and control mice were 8- to 10-week-old. Mice were maintained in the Biological Resource Center at the Medical College of Wisconsin. All animal protocols were approved by the MCW Institutional Animal Care and Use Committee.
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6

Generation of Crk and CrkL Conditional Mice

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C57BL/6 mice were obtained from the Animal Production Facility of the National Cancer Institute –Frederick Cancer Research and Development Center (Frederick, MD) and Rag1-deficient mice, B6 background, from The Jackson Laboratory (Bar Harbor, ME). The mice carrying the Cre-dependent conditional alleles for Crk and CrkL, generously provided by Dr. A Imamoto, were generated in accordance to animal protocols approved by the IACUC of the University of Chicago. The Crk conditional allele was generated by inserting two loxP sites upstream and downstream of Exon 1 by homologous recombination in a line of ES cells with a B6 inbred background. A mouse strain carrying a CrkL allele, CrkLtm1a(EUCOMM)Hmgu, was generated using ES cells in a B6-inbred background, obtained from EUCOMM/Helmholtz Zentrum Muenchen [38 (link),39 (link)]. To make it a Cre-dependent conditional allele, the lacZ and neo cassettes were removed by genetic cross with a FLP strain to derive a conditional allele, CrkLtm1c(EUCOMM)Hmgu, leaving only one FRT and one loxP sites upstream of Exon 2 and one loxP site downstream of Exon 2. For the current study, the Crk and CrkL conditional strains were intercrossed to obtain compound homozygotes. Animal care was provided in accordance with procedures outlined in the “Guide for Care and Use of Laboratory animals” (National Institute of Health, Bethesda, MD, 1996).
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7

Generation and Characterization of Slc1a5 Knockout Mice

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Slc1a5−/− mice (in C57BL/6 × 129/sv genetic background) were generated by a conventional gene-targeting strategy, in which coding exons 2 and 4 were replaced with a lacZ–neomycin-resistance cassette (Taconic, Figure S1). Heterozygous Slc1a5+/– mice were bred to generate age- and sex-matched homozygous ASCT2-ablated (Slc1a5−/−) and wild-type (Slc1a5+/+) mice, which were used in the experiments at the indicated ages. Genotyping PCR and RT-PCR primers are listed in Supplementary Table1. The TCR transgenic OT-II mice and the lymphocyte-deficient Rag1−/− deficient mice were from Jackson Laboratory. Ikbkb-floxed mice, provided by Dr. Manolis Pasparakis (University of Cologne), were crossed with Cd4-cre mice (Jackson Laboratory) to produce T cell-conditional Ikbkb−/− mice. Card11−/− mice (C57BL/6 × 129/sv genetic background) were provided by Dr. Josef Penninger (Austria Academy of Sciences), Bcl10−/− mice were provided by Dr. Stephan Morris (St Jude Children’s Research Hospital), and the Malt1−/− mice were provided by Dr. Vishva Dixit (Genentech). Mice were maintained in specific pathogen-free facility of The University of Texas MD Anderson Cancer Center, and all animal experiments were conducted in accordance with protocols approved by the Institutional Animal Care and Use Committee.
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8

Kras Conditional Knockout Mice

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Krasfl/fl mice were crossed with VavCre transgenic mice and the mouse line was maintained on C57BL/6 genetic background (> N10) (22 (link)). Experimental VavCreKrasfl/fl and control VavCreKrasfl/+ mice were 8-12 weeks old. BALB/c (H-2d) and Rag1-deficient mice were from Jackson Laboratory. The Medical College of Wisconsin Institute Animal Care and Use Committee approved the animal protocols.
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9

Generation of Bcl11b Mutant Mice

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A DNA fragment harboring C to A nucleotide change that generates Bcl11bN797K protein was generated by overlap PCR, and replaced with wt exon 4 in the target vector, which was used to generate the Bcl11bflox allele (9 (link)). The targeting vector for Bcl11bN797K mutation was transfected into M1 embryonic stem (ES) cells as previously described (9 (link)), and ES clones which underwent homologous recombination were identified by PCR with an appropriate primer set. Bcl11b+/N797K mice were generated by crossing C57BL/6NJcl mice purchased from CLEA Japan (Shizuoka, Japan) with chimeric mice generated from ES clones with Bcl11b+/N797K genotype. The Bcl11b<σπ>Δ</σπ> allele was generated from the Bcl11bfl allele (9 (link)) by crossing Bcl11b+/fl mice with EIIa-Cre transgenic mice that were purchased from Jackson laboratory (#003314). Cd4ΔS mice was previously described (24 (link)). CD45.1 congenic mice and Rag1-deficient mice were obtained from Jackson Laboratories. All mice were maintained in the animal facility at the RIKEN IMS. All animal procedures were in accordance with institutional guidelines for animal care and the protocol (2020–026) approved by the Institutional Animal Care and Use Committee of RIKEN Yokohama Branch. All the mice were sacrificed by euthanasia with CO2 overdose following anesthesia using isoflurane.
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10

Generation and Characterization of Transgenic Mice

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All animal experiments were performed in accordance with a protocol approved by the Animal Care and Use Committee of the National Cancer Institute. C57BL/6 WT (Ly5.2+) and Ly5.1+ congenic mice; mice expressing diphtheria toxin receptor transgene under a CD11c promotor (CD11c-DTR Tg); mice expressing MHC class I-restricted TCR specific for ovalbumin (OT-1 Tg); and mice deficient for Tap1, MHC class II, both CD80 and CD86 B7 molecules, CD28, IL-6, OX40, CD47, and IL-15 receptor alpha (IL-15RαKO) were purchased from Jackson Laboratories. IL-15-deficient (IL-15KO) mice were purchased from Taconic Biosciences. CD11c-DTR Tg mice were crossed with Rag1-deficient mice (Jackson Laboratories) to generate CD11c-DTR-Rag1KO mice. IL-15RαKO and IL-15KO mice were backcrossed to the C57BL/6 strain for 10 additional generations in our facility. IL-15Rα transgenic mice were generated by our group (47 (link)).
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