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10 protocols using ym 254890

1

Macrophage Activation Signaling Compounds

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RPMI-1640 and penicillin-streptomyocin (P/S) from Invitrogen (Carlsbad, CA). Human AB serum and fetal bovine serum (FBS) from Mediatech (Tewksbury, MA). HEPES solution from Fisher Scientific (Fair Lawn, NJ). Dantrolene sodium salt, serotonin hydrochloride, isoproterenol hydrochloride, NKH 477, forskolin and phorbol 12-myristate 13-acetate (PMA) from Tocris Biosciences (Minneapolis, MN). isoproterenol hydrochloride from R&D Systems (Minneapolis MN). Dopamine and H89 dihydrochloride from Sigma-Aldrich (St. Louis, MO). 3-Isobutyl-1-methylxanthine (IBMX) from MP Biomedicals (Santa Ana, CA). RO-20-1724 from EMD Millipore (Temecula, CA). YM-254,890 from Focus Biomolecules (Plymouth Meeting, PA). Dopamine and the beta-adrenergic receptor agonist Isoproterenol were resuspended in distilled H2O to make stock concentrations of 10 mM, then diluted into media as needed. RO-20-1724 (200 mM), IBMX (100 mM), forskolin (10 mM), YM-254,890 (10 mM) and PMA (100 μM) were resuspended in DMSO to the indicated concentrations, then diluted into media as indicated. Human macrophage colony stimulating factor (M-CSF) was from Peprotech (Rocky Hill, NJ) and resuspended in 100 μL distilled H2O.
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2

Oleuropein Synthesis and GLP-1 Assay

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Oleuropein (purity ≥ 80%, HPLC) for EA synthesis was from Shaanxi Huike Botanical Development Co. (Xi’an, China); metformin was from Cayman Chemicals (Ann Arbor, MI, USA); U73122 was from Tocris Bioscience (Pittsburgh, PA); YM 254,890 was from Focus Biomolecules (Plymouth Meeting, PA, USA); DMEM media, fetal bovine serum (FBS), and other cell culture supplements were from Hyclone (GE Healthcare Bio-Sciences, Pittsburgh, PA, USA); fluro-4AM was from ThermoFisher Scientific (Waltham, MA); antibodies for western blotting were from Santa Cruz Biotechnology (Dallas, TX, USA); assay kits for measuring active GLP-1 [GLP-1 (7–36) amide and GLP-1 (7–37)], triglyceride, human PYY as well as dipeptidyl peptidase IV (DPP4) inhibitor assay kit were from Cayman Chemical (Ann Arbor, MI); oleacein, hydroxytyrosol, oleocanthal, tyrosol, and oleuropein (≥ 95% pure) for GLP-1 secretion assays, RPMI1640 medium, and all other chemicals were purchased from Millipore Sigma (Burlington, MA, USA); IP3 ELISA kit was from Amsbio (Cambridge, MA, USA); mouse insulin and leptin ELISA kits and mouse total GLP-1 ELISA kits were from Crystal Chem (Elk Grove Village, IL); glucose meter and strips were from AgaMatrix (Salem, NH); and free fatty acid (FFA) assay kits were from BioAssay Systems (Hayward, CA, USA).
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3

Elucidating IGF-II Signaling Pathways in Senescence

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IGF-II signal transduction may occur through different pathways (Figure 5a). We determined which of these could be associated with senescence. In particular, the MSC cultures were incubated at 37°C for 30 min with each of the following drugs, separately: 100 nM Pertussis toxin (PTX, BMLG101-0050 Enzo Biochem, NY, USA) for the Gαi kinase, 1 μM YM-254890 (YM, 10–1590 Focus Biomolecules, PA, USA) to block Gαq/11, 50 μM D609 (sc201403, Santa Cruz Biotechology, CA, USA) to inhibit PLCβ, 10 μM BAPTA-AM (BPT) (15551 Cayman, MI, USA) and 10 mM 1,2,3,4-tetrahydrostaurosporine (STP, ab143861, Abcam, UK) for PKCα kinase inhibition, 5 nM PKCβi (Santa Cruz Biotech, TX, USA) for PKCβ inhibition, and 100 mM chlorpromazine (CPZ, sc-357313, Santa Cruz) to block endocytosis. Subsequently, we added 25 ng/ml IGF-II, and the samples were further incubated for 24 hr, and the senescence assays were performed. For each drug, we evaluated the inhibitory effect at the concentration we used (Figure 7—figure supplement 1).
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4

Optimized Signaling Pathway Assay

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all chemicals were obtained from Sigma, Co., Inc. (St Louis, MO), except YM-254890 (Focus Biomolecules) and LY 379268 (Tocris Bioscience).
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5

Evaluation of Candidate Inhibitors

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YM-254890 was purchased from Focus Biomolecules (10–1590) and Wako Pure Chemical Industries (257–00631). Linsitinib (OSI-906) was purchased from Selleck Chemical (S1091) and LC Laboratories (L-5814). Picropodophyllin (PPP) and Alpelisib (BYL719) were purchased from Selleck Chemical. IGF1 was purchased from Abcam.
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6

Platelet Activation and Signaling Assays

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Dimethyl sulfoxide (DMSO), Arg-Gly-Asp-Ser (RGDS), U73122, hydrogen peroxide (H2O2), and calcium ionophore (A23187) were purchased from Sigma-Aldrich. Fluo-4-AM was purchased from Thermo-Fisher Scientific. PAR1-AP (SFLLRN) and PAR4-AP (AYPGKF) were purchased from AnaSpec. Collagen was purchased from Chronolog. Human α-thrombin was purchased from Enzyme Research. Convulxin was purchased from Pentapharm. Bisindolylmaleimide I (BIS) and 1,2-bis(2-aminophenoxy)ethane N,N,N′,N′-tetraacetic acid acetoxymethyl ester (BAPTA/AM) was purchased from Calbiochem. YM-254890 was purchased from Focus Biomolecules. Manganese (III) tetrakis(1-methyl-4-pyridyl)porphyrin pentachloride (MnTMPyP) was purchased from Santa Cruz Biotechnology. Thapsigargin was purchased from Cayman Chemical. All other chemicals used were of analytical grade and purchased from Sigma-Aldrich.
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7

Cell Signaling Assay Protocols

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The reagents used were as follows: carbachol (Fisher Scientific), bombesin (Tocris Bioscience), SDF-1α (PeproTech), NE and isoproterenol (Sigma-Aldrich), YM-254890 (Focus Biomolecules), atropine, Ptx, U-50488, and wortmannin (Cayman Chemical), 11-cis-retinal (National Eye Institute). According to the manufacturer's instructions, all of the reagents were dissolved in appropriate solvents and diluted in 1% Hank's balanced salt solution supplemented with NaHCO3, or a regular cell culture medium, before adding to cells.
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8

Pharmacological Modulation of G-Protein Signaling

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JWH133, SR144528, orexin-A, SB334867 and YM 254890 were purchased from Tocris Bioscience (Bristol, UK). Forskolin, cholera toxin from Vibrio cholerae (CTX) and pertussis toxin (PTX) from Bordetella pertussis were purchased from Sigma-Aldrich (St. Louis, MO, USA), and the Gq inhibitor, YM254890, was obtained from Focus Biomolecules (Plymouth Meeting, PA, USA).
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9

Pharmacological Evaluation Protocol

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Y27632, U73122, spiperone, M100907, ketanserin, bosentan, losartan, prazosin was obtained from Sigma, Inc., (St. Louis, MO). YM254890 was obtained from Focus Biomolecules, (Plymouth Meeting, PA). All other chemicals were research grade.
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10

Embryo Treatment Compound Screening

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All compounds for treating embryos were dissolved in DMSO, diluted in 0.5× E2 Embryo Medium and embryos treated by immersion. The compounds, and concentrations used, with catalogue numbers were diphenyleneiodonium chloride (DPI), 40 µM (D2926, Sigma); thapsigargin, 6.25 µM (T9033, Sigma); bisindolylmaleimide I (GF109203X), 85 µM (S7208, Selleckchem); YM-254890, 32 µM (10-1590-0100, Focus Biomolecules); 2-aminoethyl diphenylborinate (2-APB), 2.5 µM (D9754, Sigma), BI-D1870, 1.2 µM (Axon-1528, Axon Medchem); dimethyl fumarate, 9 µM (242926, Sigma); phorbol 12-myristate 13-acetate (PMA), 37.5 or 125 ng/ml (P8139, Sigma); U0126, 100 µM (9903, Cell Signaling Technology); PD184352 (CI-1040), 1.3 µM (S1020, Selleckchem). Unless otherwise stated, controls for all experiments were exposed to 0.5% DMSO carrier in 0.5× E2 Embryo Medium.
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