The largest database of trusted experimental protocols

Electrophoresis gel imaging system

Manufactured by Bio-Rad
Sourced in United States

The Electrophoresis Gel Imaging System is a laboratory equipment designed to capture and analyze images of electrophoresis gels. It provides a means to visualize and document the results of gel-based separation techniques, such as DNA, RNA, or protein electrophoresis.

Automatically generated - may contain errors

4 protocols using electrophoresis gel imaging system

1

Comprehensive RNA Extraction and Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Total RNA were extracted from liver, head kidney, and pituitary using Trizol Reagent (Invitrogen, America) and reversely transcribed according to the reference methods described in our previous research [30 (link)]. The RNA quality was evaluated through an electrophoresis gel imaging system (Bio-Rad, America). Yield determination was performed using NanoDrop 2000c (Thermo, America). An optical density ratio of 1.8–2.0 was observed between 260 and 280 according to the electrophoresis bands, and luminance detection integrity of total RNA was observed at 28, 18, and 5 s. Following the manufacturer's instructions, reverse transcription reaction (Takara, Japan) and RT–qPCR were performed (Quant Studio 6 Flex, Applied Biosystems, Singapore) [30 (link)].
+ Open protocol
+ Expand
2

Quantifying Tight Junction Proteins in Ischemic Penumbra

Check if the same lab product or an alternative is used in the 5 most similar protocols
Six rats from each group were euthanized 48 hours post-occlusion. The brains were carefully removed and placed in chilled saline. Total protein was isolated directly from the ischemic penumbra after cell lysis and then added to Laemmli buffer (75 mM Tris-HCl containing 2% sodium dodecyl sulfate (SDS), 10% glycerol, 2% 2-mercaptoethanol, 0.002% bromphenol blue). The samples were heated to 95°C for 10 minutes and then separated on 10% Tris/glycine/SDS acrylamide gels (Bio-Rad, Hercules, CA, USA). The proteins were subsequently transferred to polyvinylidene difluoride (Minipore, Billerica, MA, USA) membranes and blocked for 2 hours at room temperature in 5% non-fat milk. The immunoblots were incubated for 2 hours at 37°C with mouse anti-occludin or mouse anti-ZO-1, both with β-actin monoclonal antibody (serving as the control) (all at 1:200; Santa Cruz Biotechnology, Santa Cruz, CA, USA). After washing (3 × with Tris-buffered saline/0.05% Tween-20), the blots were incubated with horseradish peroxidase-conjugated goat anti-mouse antibody (1:1,000; Santa Cruz Biotechnology) for 1 hour at 37°C. The membranes were then stained with tetrazotized o-dianisidine and β-naphthyl acid phosphate and analyzed with an electrophoresis gel imaging system (Bio-Rad) to obtain OD values. The levels of occludin and ZO-1 were then expressed as percentages relative to β-actin.
+ Open protocol
+ Expand
3

Quantification of Notch and DLL4 mRNA in Lung Tissues

Check if the same lab product or an alternative is used in the 5 most similar protocols
The levels of Notch receptors (Notch 1–3) and Delta-like (DLL)-4 in lung tissues were detected by RT-PCR. Total RNA of lung tissues was extracted using Trizol reagent (Takara, Dalian). We used 1 μL of cDNA with SYBR Green Master to configure the reaction system for PCR reaction. PCR amplifications were performed at 95°C for 5 min, followed by 30 cycles of thermal cycling at 95°C for 20 s, 60°C for 30 s, and 72°C for 30 s. The results were observed and photographed in an electrophoresis gel imaging system (Bio-Rad, USA). Each band value relative to the reference gene (β-actin) was calculated and analyzed using Image J software, and then normalized to compare the expression levels of Notch1, 2, and 3 and DLL4 mRNA in tissues. The primers used in this study were:
+ Open protocol
+ Expand
4

Liver RNA Extraction and Gene Expression Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
According to the instructions, the TransZol Up Plus RNA kit was used to extract the total RNA in the liver. The RNA purity was tested with 1.2% agarose gel by an electrophoresis gel imaging system (Bio-Rad, America), and the RNA concentration was detected with a nucleic acid protein analyzer (NanoDrop 2000; Thermo, USA). Then, the total RNA of each group was used as the template for reverse transcription with Evo M-MLV reverse transcription kit II. The reaction system was 20 μL: removal of genomic DNA products, 10 μL; Evo M-MLV RTase Enzyme Mix, 1 μL; RT Primer Mix, 1 μL; 5x RTase Reaction Buffer Mix II, 4 μL; and RNase Free dH2O, 4 μL.
Using β-actin as internal reference, real-time quantitative PCR was performed using SYBR® Green Pro Taq HS Premix II qPCR kit and quantified on the LightCycler 480 (Roche Applied Science) using the following program: denaturation at 95°C for 30 s, followed by 40 cycles at 95°C of 5 s and 60°C for 30 s. The reaction system was 10 μL: 2x SYBR® Green Premix Pro Taq HS Kit II, 5 μL; 0.4 μL for positive and negative primers, respectively; cDNA, 1 μL; and RNase Free dH2O, 3.2 μL. Primers of target genes used for qPCR are shown in Table 3. The relative gene expressions were calculated by the method of 2-ΔΔCt [9 (link)].
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!