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Atb new

Manufactured by bioMérieux
Sourced in France

The ATB New is a compact and automated microbiology system designed for the identification and antimicrobial susceptibility testing of microorganisms. It provides rapid and reliable results to aid in the diagnosis and treatment of infectious diseases.

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4 protocols using atb new

1

Characterization of XDRAB Isolates

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Twelve isolates of XDRAB were derived from the bacterial specimens of patients from the critical care units, internal medicine, and emergency departments at the First Affiliated Hospital of Chengdu Medical College from 2018 to 2020 (Chengdu, China). Standard laboratory methods and ATB New (BioMérieux, France) were used to identify these isolates, which were also confirmed by PCR of the genes 16S rRNA and blaOXA-51 (Chang et al., 2015 (link)); Chromobacterium violaceum 026 (CV026) was purchased from Biobw (Beijing, China); A. baumannii ATCC 17978 and Escherichia coli DH5a were preserved in our laboratory.
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2

Isolation and Characterization of XDRAB Strains

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Nine isolates of XDRAB were derived from clinical specimen (septum, endotracheal aspirate or respiratory lavage fluid) of patients from the critical care units, geriatrics, internal medicine and emergency department at the First Affiliated Hospital of Chengdu Medical College in 2018 to 2019 (Chengdu, Sichuan, China). These isolates were identified by standard laboratory methods and ATB New (bioMérieux, France) and also were further verified by PCR of two genes, 16S rRNA (with primers 5′-CATTATCACGGTAATTAGTG-3′ and 5′-AGAGCACTGTGCACTTAAG-3′) and blaOXA-51 (with primers 5′-TAATGCTTTGATCGGCCTTG-3′ and 5′-TGGATTGCACTTCATCTTGG-3′)42 (link),43 (link). Staphylococcus aureus ATCC29213 and Escherichia coli ATCC25922 used as quality control strains in antimicrobial susceptibility testing were obtained from the American Type Culture Collection (USA).
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3

Isolation and Identification of A. baumannii Strains

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A total of 47 A. baumannii clinical isolates were derived from the blood, sputum or swab samples of patients from different departments at the First Affiliated Hospital of Chengdu Medical College, China from 2014 to 2015. Bacteria were aerobically grown at 37°C in Mueller-Hinton (MH) broth or agar (Oxoid, England) or in Luria-Bertani (LB) broth (Lin et al., 2009 (link)). These isolates were identified by ATB New (bioMérieux, France) (Chang et al., 2015 (link)) and further verified by PCR products of rpoB (Wang et al., 2014 (link)) and 16S rRNA gene (Chiang et al., 2011 (link)) with the primers included in Table S1. The PCR products were sequenced by Tsingke Biological Technology (Tsingke, Chengdu, China), followed by sequence alignment using BLAST (http://blast.ncbi.nlm.nih.gov/Blast.cgi).
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4

Characterization of A. baumannii Isolates

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A total of 110 consecutive and non-duplicated A. baumannii clinical isolates were collected from different departments [intensive care unit (ICU), gastroenterology, respiratory, neurosurgery and other wards] at the First Affiliated Hospital of Chengdu Medical College, Chengdu, Sichuan, China from 2012 to 2013. Isolates were identified by standard laboratory methods and ATB New (bioMérieux, France). A. baumannii was further verified when two PCR products were yielded as reported: a 425-bp internal control amplicon corresponding to the recA gene of Acinetobacter spp. and the 208-bp fragment of the 16S rRNA (Chiang et al., 2011 (link)) intergenic spacer region of A. baumannii (Table 1). All strains were stored at –80°C, and bacteria were grown on tryptose agar or Mueller–Hinton broth or agar (Oxoid, England).
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