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53 protocols using ab194583

1

Protein Expression Analysis of Hippocampal Cells

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Hippocampal cells and cerebrospinal fluid were obtained as described previously (34 (link)), homogenized in lysate buffer containing protease inhibitor and centrifuged at 8,000 g/min at 4°C for 10 min. Total protein was extracted from the resulting supernatant using a Protein Extraction kit (20021; Qiagen Sciences, Inc., Gaithersburg, MD, USA), according to the manufacturer's instructions. SDS assays were performed as described previously (35 (link)). For western blot analysis, primary antibodies anti-bax (1:1,000; ab32503), anti-Bcl-2 (1:1,000; ab194583), anti-caspase-3 (1:1,000; ab13847), anti-caspase-9 (1:1,000; ab18571), anti-p38 (1:1,000; ab31828), anti-ERK (1:1,000; ab176660), anti β-actin (1:1,000; ab8226; all Abcam; Cambridge, UK) were added to PVDF membranes (EMD Millipore) and incubated at 4°C overnight. Membranes were blocked in 5% skimmed milk for 1 h at 37°C and then incubated with HRP-conjugated goat anti-rabbit IgG mAb (PV-6001; ZSGB-BIO) for 24 h at 4°C. A Ventana Benchmark automated staining system was used to determine protein expression in tumor tissues (Olympus BX51; Olympus Corporation).
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2

Western Blot Analysis of Cell Signaling

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Western blotting analysis was accomplished according to a previous report.26 Total protein from each group was fractionated by 10% SDS‐PAGE and electroblotted onto a nitrocellulose membrane followed by blocking with 5% non‐fat milk and incubated with primary antibodies against Caspase3 (1:500, ab13847, Abcam), Bcl‐2 (1:500, ab194583, Abcam), Runx2(1:500, ab76956, Abcam), OCN(1:300, sc‐390877, Santa Cruz Biotechnology, Inc) and β‐actin (1:1000, 3700, Cell Signaling Technology) followed by incubation with a HRP‐conjugated secondary antibodies (1:4000, Santa Cruz) at room temperature for 1 hour and visualized by enhanced chemiluminescence Western blot system.
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3

Western Blot Analysis of Apoptosis Regulators

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The protein extraction from brain tissues or bEnd.3 cells was quantified by BCA protein assay kit (Beyotime Biotechnology, Shanghai, China), denatured at 98 °C for 10 min, and then, separated by SDS-PAGE gel electrophoresis and transferred to polyvinylidene difluoride membranes (Millipore, Billerica, MA, USA). The membranes were blocked with 5% non-fat milk for 1 h at room temperature, and then incubated overnight at 4 °C with primary antibodies against B-cell lymphoma-2 (Bcl-2) (ab194583, 1 : 1000 dilution, Abcam, Cambridge, UK), Bcl-2-associated x protein (Bax) (ab182733, 1 : 2000 dilution, Abcam), FOXO3 (ab70315, 1 : 5000 dilution, Abcam) and β-actin (ab8227, 1 : 5000 dilution, Abcam). Subsequently, the membranes were incubated with secondary antibody (ab6721, 1 : 10 000 dilution, Abcam), conjugated by horseradish peroxidase for 2 h at room temperature and interacted with enhanced chemiluminescence chromogenic substrate (Beyotime Biotechnology). The protein signals were analyzed with Image Lab software (Bio-Rad) with β-actin as the loading control.
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4

Verification of ALR IgG Purity and Apoptosis Markers

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To verify the purity of the ALR IgG, 20 µg ALR was processed for SDS-PAGE, and the bands were visualized by silver staining using the Fast Silver Stain Kit (Beyotime). For western blotting, proteins were extracted from cells using RIPA lysis buffer (Beyotime), and protein concentrations were determined with a bicinchoninic acid (BCA) Protein Assay (Beyotime). For western blotting, proteins (30 µg/well) were separated by SDS-PAGE, transferred to polyvinylidene fluoride membranes, blocked with 5% nonfat milk, and probed with ALR (1:1,000), Bax,1:2,000 (ab182733; Abcam, Cambridge, UK), Bcl-2, 1:2,000 (ab194583; Abcam), Cleaved caspase-3 (1:1,000; Cell Signaling Technology), and cleaved caspase-9 (1:1,000; Cell Signaling Technology) primary antibodies.
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5

Apoptosis Evaluation in Rat Tissues

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Post 12 hours of CME modeling, rats were euthanized. Thick sections (4μm) were prepared, followed by immunofluorescence staining as suggested by the manufacturer. These sections were rinsed thricely in PBS, and then they were blocked in BSA for 0.5 hours at ~25 °C, followed by incubating the sections with following primary antibodies for 24 hours (at 4 °C): cleaved caspase-3 (#9661, Cell Signaling Technologies, Danvers, MA, USA), Bax (ab53154, Abcam, Cambridge, UK), and Bcl-2 (ab194583, Abcam) followed by five times washing with PBS. The sections were then subjected to incubation with fluorescent secondary antibodies at ~ 25°C for 50 minutes. DAPI was used for counterstaining of nuclei for 7 minutes. A fluorescence microscope (Olympus, Japan) was employed to obtain the images.
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6

Immunohistochemistry Protocol for Kidney Sections

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Immunohistochemistry was performed using the method described by Giribabu etal.27 (link) Kidney sections were deparaffinized, rehydrated, and antigen-retrieved using a10 mM sodium citrate buffer solution (pH 6.0) for immunohistochemical investigations. Endogenous peroxidase activity was suppressed with 0.3% Hydrogen peroxide (H2O2) prior to sections being incubated overnight at 4°C with primary antibodies such as Anti-Nrf2 (ab62352), anti-NOX-4 (ab109225), anti-Keap-1 (ab218815), anti-NF-κB (ab16502), anti-MCP-1 (ab25124), anti-BCL-2 (ab194583) and anti-BAX (ab32503), anti-Caspase-9 (ab184786) (1:1000; Abcam, Cambridge, UK) diluted in 5% bovine serum albumin (BSA). After incubation, slides were rinsed three times in PBS, incubated for 1hour with the appropriate secondary antibody for 60 min, stained with 3ʹ-Diaminobenzidine (DAB), and counterstained with hematoxylin. The images were examined and captured using an Olympus phase-contrast microscope.
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7

Western Blot Analysis of Chondrocyte Proteins

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Chondrocytes were lysed by radio immunoprecipitation assay (RIPA) lysis buffer with phenylmethylsulfonyl fluoride (PMSF) and a phosphatase inhibitor. The concentration of proteins was measured using a bicinchoninic acid (BCA) protein assay kit (Beyotime, Beyotime Biotechnology, China). The proteins (30 µg) were separated by SDS-polyacrylamide gel electrophoresis (SDS-PAGE) and were transferred to polyvinylidenedifluoride (PVDF) membranes. The membranes were blocked in a nonfat dry milk solution for 1 hour. Then, the membranes were incubated overnight at 4°C with anti-AMPK (CST, #2532, 1:1000 dilution), anti-p-AMPK (CST, #2535, 1:1000 dilution), anti-mTOR (CST, #2983, 1:1000 dilution), anti-p-mTOR (CST, #5536, 1:1000 dilution), anti-Beclin-1 (Abcam, ab207612, 1:1000 dilution), anti-ULK1 (Abcam, ab133747, 1:1000 dilution), anti-LC3 II (Abcam, ab48394, 1:1000 dilution), anti-P62 (Abcam, ab56416, 1:2000 dilution), anti-Bcl2 (Abcam, ab194583, 1:2000 dilution) and anti-Bax (Abcam, ab32503, 1:1000 dilution) primary antibodies in dilution buffer. Next, the membranes were incubated with horseradish peroxidase (HRP)-conjugated anti-rabbit or anti-mouse IgG (Zhongshan Golden Bridge Biotechnology, 1:5000 dilution) at room temperature for 1 hour. Then, the membranes were developed using the enhanced chemiluminescence substrate LumiGLO (Millipore, Bedford, MA, USA).
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8

Western Blot Analysis of Protein Expressions

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Total protein was extracted from H9c2 cells, of which the concentration was measured by BCA method. Protein samples in different groups were separated by 12% SDS-PAGE and transferred to activated PVDF membranes. Then, the membranes were blocked in 5% skim milk, followed by the incubation against the following primary antibodies overnight at 4°C: ANGPTL2 (ab199133; Abcam), Bcl2 (ab194583; Abcam), Bax (ab32503; Abcam), c-caspase9 (9507; Cell signaling technology), c-PARP (ab32064; Abcam), caspase9 (ab184786; Abcam), PARP (ab191217; Abcam), HIF1A (ab228649; Abcam), Nrf2 (ab92946; Abcam), HO-1 (ab68477; Abcam), GAPDH (ab181602; Abcam) and Lamin B1 (ab133741; Abcam). After being washed three times, the membranes were incubated with secondary antibodies (ab133470; Abcam) at room temperature for 1 h. The protein bands were developed by the enhanced chemiluminescence (ECL) system, and the density of each band was semi-quantified using ImageJ software (version 1.0; National Institutes of Health).
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9

Protein Expression Analysis in PC12 Cells

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PC12 cells were lysed with lysis buffer and incubated on ice for 30 min. Then the lysate was centrifuged at 10000×g at 4 °C for 20 min, and the supernatant were quantified with BCA™ Protein Assay Kit (Pierce, Rockford, IL, USA). Proteins (30 μg/lane) of PC12 cells were subjected to SDS-PAGE and were then transferred to PVDF membranes. The blots were incubated with primary antibodies against B cell lymphoma-2 (Bcl-2, ab194583), Bcl-2-associated X protein (Bax, ab182733), brain-derived neurotrophic factor (BDNF, ab205067), nerve growth factor (NGF, ab52918), Nestin (ab6142), nuclear factor κB (NF-κB, ab28856), inhibitor of NF-κB α (IκBα, ab32518), GAPDH (ab181603) (all from Abcam, Cambridge, UK), Notch intracellular domain (NICD; 3608, Cell Signaling Technology, Beverly, MA, USA) or Notch1 (sc-32,756; Santa Cruz, Santa Cruz, CA, USA) overnight at 4 °C, and then incubated with secondary antibodies conjugated to horseradish peroxidase at room temperature for 1 h. The bound antibody proteins were visualized by an enhanced chemiluminescence detection system (GE Healthcare Biosciences, Piscataway, NJ, USA). The signals were captured and the intensity of the bands was quantified using Image Lab™ software (Bio-Rad, Shanghai, China).
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10

Western Blot Analysis of Protein Markers

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As the previously described [23 (link)], RIPA Lysis buffer (Beyotime, Shanghai, China) was used to extract total protein. Equal amount of protein was separated using 10% SDS-PAGE gel and then electro-transferred onto PVDF membranes (Invitrogen). The membranes were blocked with 5% nonfat milk followed by incubated overnight with primary antibodies at 4°C, including CD9 (1:2,000, ab92726, Abcam, Cambridge, MA, USA), CD63 (1:1,000, ab134045, Abcam), CD81 (1:2,000, ab109201, Abcam), ZO-1 (1:1,000, ab216880, Abcam), occludin (1:250, ab31721, Abcam), E-cadherin (1:10,000, ab40772, Abcam), α-SMA (1:1,000, ab5694, Abcam), Bcl-2 (1:1,000, ab194583, Abcam), Bax (1:1,000, ab32503, Abcam), cleaved caspase 3 (1:1,000, ab2302, Abcam), and β-actin (1:1,000, ab5694, Abcam). After further incubated with secondary antibody (1:50,000, ab205718, Abcam), the protein signals were visualized using Enhanced Chemiluminescence Detection Kit (Vazyme, Nanjing, China).
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