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Ammonium persulfate

Manufactured by Thermo Fisher Scientific
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Ammonium persulfate is a chemical compound that is commonly used as a reagent in various laboratory applications. It functions as an oxidizing agent and is often utilized in polymerization reactions, as well as in certain analytical and purification techniques.

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50 protocols using ammonium persulfate

1

Fluorescent Nanodiamond Synthesis Protocol

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Acrylamide monomer, bis-acrylamide (a cross-linker agent), creatinine powder (99+%), N-hydroxysuccinimide (NHS, 98+%), Tetramethylethylendiamine (TEMED) and ammonium persulfate (APS) were purchased from Fisher Scientific, Waltham, MA, USA. Fluorescent nanodiamond (70 nm average particle size, 1 mg/mL in deionized (DI) water with >300 nitrogen-vacancy centers per particle) was purchased from Sigma-Aldrich (St. Louis, MO, USA).
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2

Protein Assay and SDS-PAGE Protocol

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Fluorescamine, Triton X-100, iodoacetamide (IAM) and all proteins including trypsin were obtained from Sigma-Aldrich (St. Louis, MO, USA). Hydrogen peroxide (H2O2), dimethyl sulfoxide (DMSO), Coomassie brilliant blue R-250, formic acid, acetonitrile (ACN), urea, dithiothreitol (DTT), anhydrous sodium phosphate dibasic, sodium chloride, ammonium bicarbonate, acrylamide, sodium dodecyl sulfate (SDS) and ammonium persulfate were purchased from Fisher Scientific (Waltham, MA, USA). The Laemmli sample buffer (2×) was obtained from Bio-Rad (Hercules, CA, USA). All proteins were purchased from Sigma-Aldrich (St. Louis, MO). Ultrapure water with electric resistance larger than 18.2 MΩ was produced by the Milli-Q water purification system (Millipore, Billerica, MA, USA).
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3

Oxidative Stress in SH-SY5Y Cells

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Fetal bovine serum (FBS), phosphate buffered saline (PBS), Dulbecco’s minimum essential medium plus F12 (DMEM/F12), penicillin and streptomycin were purchased from Invitrogen (Gaithersburg, MD). Acrylamide/ bis-acrylamide, tris base, glycine, ammonium persulfate, PVDF membrane, TEMED, DTT, SDS, urea, thiourea, glycerol, ammonium bicarbonate, DMSO, ECL reagent, bromoplenol blue were purchased from Fisher Scientific (Pittsburgh, PA). Trypsin and trypan blue were obtained from Sigma-Aldrich (St. Louis, MO).
SH-SY5Y cells were cultured in DMEM/F12 containing 10% FBS, 100 U/ml penicillin and 100 mg/ml streptomycin at 37°C in an atmosphere containing 5% CO2. In order to perform treatments the media were supplemented with 2 mM H2O2 (Sigma-Aldrich, MO), 25 μM Edaravone (Abcam, MA) or a combination of H2O2/Edaravone for 8 h (Kaste et al., 2013 (link)).
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4

Synthesis of Graphene Oxide Nanosheets

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All chemicals used in this research were of analytical grade. Used granular black tea leaves were collected locally. Graphite powder used for the GO nanosheet synthesis was obtained from Sigma Aldrich (Saint-Louis, MO, USA). Ammonium persulfate, acetone, and ethanol were procured from Fisher Scientific, Loughborough, UK. Aniline was procured from Sisco Research Laboratories Pvt. Ltd. KBr (Sigma Aldrich) was used to prepare the bromide solution.
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5

PEGDA Hydrogel Synthesis Protocol

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Poly (ethylene glycol) diacrylate (PEGDA) (Mn = 750) was purchased from Sigma-Aldrich (St. Louis, MO). Dulbecco’s phosphate buffered saline (DPBS), ammonium persulfate (APS), and tetramethylethylenediamine (TEMED) were obtained from Fisher Scientific (Suwanee, GA).
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6

Synthesis of Phenylboronic Acid Monomer

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All chemicals were purchased from Sigma‐Aldrich unless otherwise specified and were used as received. 3‐(acrylamido)phenylboronic acid was purchased from Boron Molecular (catalog number BM1195). Glucagon, D‐glucose, tetramethylethylenediamine, bis‐acrylamide, and ammonium persulfate were purchased from Fisher Scientific (catalog number 50‐751‐6116, D16‐3, PI17919, BP171‐25, AC401160100).
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7

Synthesis of Gold Nanoparticles

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Ammonium persulfate (APS, >98%), potassium persulfate (KPS, >99%), N,N’-methylenebis-acrylamide (BIS, 99%), nitric acid, hydrochloric acid (HCl), trisodium citrate dehydrate (99%), potassium carbonate (K2CO3, >99%), potassium hydroxide (KOH, 99.98%), phenylboronic acid (>98%), biphenyl (99%), absolute ethanol (EtOH), and hydrogen tetrachloroaurate trihydrate (HAuCl4∙3H2O, 99.995%) were obtained from Fisher Scientific. N-isopropylacrylamide (NIPAM, 99%, Aldrich) was recrystallized in hexanes and dried under vacuum prior to use. All glassware was cleaned with a strong acid solution and a base bath. The water used in all reactions was obtained from a Nanopure water system (Barnstead/Thermolyne).
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8

Tuning Cell Microenvironment Stiffness

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Polyacrylamide gels were prepared as previously described.[25 (link)] 12 mm glass coverslips were methacrylated by first treating with UV-Ozone (BioForce Nanosciences) for 5 minutes followed by functionalization with 20 mM 3-(trimethoxysilyl)propyl methacrylate (Sigma-Aldrich) for 5 minutes. Hydrogel solutions were prepared by mixing acrylamide/bis-acrylamide solutions (Fisher) with 1% v/v of 10% ammonium persulfate (Fisher) and 0.1% v/v of N,N,N’,N’,-Tetramethylethylenediamine (VWR International). 3%/0.3%, 4%/0.3%, 3%/0.6%, and 5%/0.15% acrylamide/bis-acrylamide concentrations were used to achieve stiffness of 150, 320, 670, and 5700 pascal, respectively. 15 μL of solution was sandwiched between a functionalized coverslip and a dichlorodimethylsilane (Acros Organics)-coated glass slide. Polymerized gels were then washed with PBS and incubated with 0.2 mg/mL Sulfo-SANPAH in 50 mM HEPES pH 8.5 in the presence of 350 nm UV light (4 mW/cm2, UVP) for 10 minutes, rinsed twice with PBS, and incubated overnight at 37°C with 0.15 mg/mL rat tail Collagen I (Millipore) in PBS. Gels were then rinsed with PBS and UV sterilized at 254nm for two hours at prior to use.
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9

Expansion and Fixation of U2Os Cells

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Expansion of cultured U2Os cell was performed according to the protocol from M'Saad and Bewersdorf (2020) (link). In short, unstained U2Os cells were fixed with 4% paraformaldehyde for 15 min., washed with PBS and post-fixed with a 0.7% paraformaldehyde/1% Acrylamide solution. The fixed cells were embedded in a thin layer of gel (19% Sodium Acrylate, Chem Cruz, catalogue number sc236893; 10% Acrylamide, Sigma-Aldrich, catalogue number 1.19784.0100; 0.1% N,N′-Cystamine-bisAcrylamide, Sigma-Aldrich catalogue number 294381; 0.25% Ammonium persulfate, Fisher BioReagents, catalogue number 87687; and 0.25% N,N,N,N′-tetramethylethylenediamine, Sigma-Aldrich, catalogue number A4929).
The gel was allowed to polymerize for 1 h at 37°C. The cells in the gel were denatured in 1 ml denaturation buffer (200 mM SDS, 200 mM Sodium Chloride, 50 mM Tris-HCl pH 6.8) at 73°C for 1 h. After denaturation, all proteins in the gel were stained with 20 μg/ml NHS-ATTO594 (Sigma-Aldrich, catalogue number 08741) in 100 mM bicarbonate for 1.5 h. The gel was expanded in milli-Q water overnight. Afterwards the Gel was expanded in milli-Q water overnight. The resulting cells were expanded approximately seven times.
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10

Traction Force Microscopy on Polyacrylamide Gels

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Traction Force Microscopy (TFM) experiments were carried out on polyacrylamide (PA) gels that are polymerized onto 25 mm diameter (#1.5, Dow Corning) coverslips. Briefly, the coverslips are treated with a combination of aminopropylsilane (Sigma Aldrich) and glutaraldehyde (Electron Microscopy Sciences) to make the surface reactive to the acrylamide. The ratios of PA to bis-acrylamide for the gels used in this study are 4.3 kPa and 8.6 kPa. A concentration of 0.05% wt/vol ammonium persulfate (Fisher BioReagents) and 20 nM beads (Molecular Probes) are embedded in the gel mixture before poly­merization. A 15 µl volume of the gel is added to the coverslip and covered with another coverslip, which has been made hydrophobic through treatment with Rain-X. The gels are polymerized on the coverslips for 30 min at room temperature. The gels are then reacted with the standard 1 mg/ml Sulfo-SANPAH (Thermo Fisher Scientific). The surface of the gels is then coated with fibronectin (F002, Sigma-Aldrich) with 0.5–1 mg/ml concentration. The reaction proceeds for 12 h overnight incubation in the dark, and the coverslips are then rinsed and stored in 1× PBS.
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