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αmouse irdye 680lt

Manufactured by LI COR

The αmouse IRdye 680LT is a fluorescent dye used for labeling and detecting proteins in biological samples. It is designed to emit light in the near-infrared range, which can provide better tissue penetration and reduced autofluorescence compared to visible wavelengths. The core function of this dye is to enable sensitive and specific detection of target proteins in various applications, such as Western blotting, immunohistochemistry, and in vivo imaging.

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3 protocols using αmouse irdye 680lt

1

Immunoblotting Assay for Vif Expression

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For immunoblotting assays, the indicated cell line was plated at a seeding density of approximately 250,000 cells per well in a 12 well plate. The next day, cells were either transfected with 250 ng of the indicated Vif construct, or, transduced with the indicated virus and allowed to incubate for 48 h. After 48 hours post-transfection/transduction, cells were collected into 1.5 mL tubes and centrifuged at 500 × g for 10 minutes. Cell pellets were resuspended in 100 mL RIPA buffer (10 μM Tricl-Cl [pH 8.0], 1 mM EDTA, 0.5 mM EGTA, 1% Triton X-100, 0.1% sodium deoxycholate, 0.1% SDS, and 140 mM NaCl) and 10% of the total cell lysate samples were combined with 2.5x SDS-PAGE loading buffer. Samples were separated by a 4%–20% gradient SDS-PAGE gel and transferred to PVDF-FL membranes (Millipore). Membranes were blocked in blocking solution (5% milk + PBS supplemented with 0.1% Tween20) and then incubated with primary antibody diluted in blocking solution. Secondary antibodies were diluted in blocking solution + 0.01% SDS. Membranes were imaged with a LICOR Odyssey instrument or film. Primary antibodies used in these experiments were αActin (Cell Signaling #4970) and αVif (NIH Reagent Program #6459). Secondary antibodies used were αrabbit IRdye 800CW (LICOR 827–08365), αmouse IRdye 680LT (LICOR 925–68020), αrabbit HRP (Cell Signaling 7074P2), and αmouse HRP (Cell Signaling 7076P2).
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2

Comprehensive Antibody Catalog for Molecular Research

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Primary antibodies used in these experiments were α-Tubulin (Sigma-Aldrich, T5168; Abcam, ab6046 and ab4074), α-A3B (5210-87-13, custom68 (link)), α-Flag (Sigma-Aldrich, F1804), α-Topoisomerase I (Abcam, ab109374), α-Lamin B1 (Abcam, ab16048), α-IgG2a (Sigma-Aldrich, M5409), α-HA (Cell Signaling Technology, 3724S), α-GFP (Abcam, ab290, Lot GR3251545 and GR3270983 for ChIP), α-mCherry (Abcam, ab167453) α-HNRNPUL1 (gift from S. Wilson, University of Sheffield, UK), α-rabbit IgG Isotype Control (Invitrogen, 02-6102, lot RI238244), α-RNA/DNA Hybrid S9.6 (Kerafast, ENH001 or obtained in house from a hybridoma cell line69 (link),70 (link)), α-dsDNA (Abcam, ab27156) and α-gamma-H2AX (Novus, NB100-384). Secondary antibodies used were α-rabbit IRdye 800CW (LI-COR, 827-08365), α-mouse IRdye 680LT (LI-COR, 925-68020), α-rabbit HRP (Cell Signaling Technology, 7074P2 or Sigma-Aldrich, A0545) and α-mouse HRP (Cell Signaling Technology, 7076P2 or Sigma-Aldrich, A8924), Alexa Fluor 488 goat anti-mouse IgG (Invitrogen, A-11029), Alexa Fluor 594 goat anti-mouse IgG (Invitrogen, A-11032), Alexa Fluor 488 goat anti-rabbit IgG (Invitrogen, A-11034), Alexa Fluor 647 goat anti-mouse IgG (Invitrogen, A-21236) and Alexa Fluor 594 goat anti-rabbit IgG (Invitrogen, A-11037).
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3

Immunoblotting Assay for Vif Expression

Check if the same lab product or an alternative is used in the 5 most similar protocols
For immunoblotting assays, the indicated cell line was plated at a seeding density of approximately 250,000 cells per well in a 12 well plate. The next day, cells were either transfected with 250 ng of the indicated Vif construct, or, transduced with the indicated virus and allowed to incubate for 48 h. After 48 hours post-transfection/transduction, cells were collected into 1.5 mL tubes and centrifuged at 500 × g for 10 minutes. Cell pellets were resuspended in 100 mL RIPA buffer (10 μM Tricl-Cl [pH 8.0], 1 mM EDTA, 0.5 mM EGTA, 1% Triton X-100, 0.1% sodium deoxycholate, 0.1% SDS, and 140 mM NaCl) and 10% of the total cell lysate samples were combined with 2.5x SDS-PAGE loading buffer. Samples were separated by a 4%–20% gradient SDS-PAGE gel and transferred to PVDF-FL membranes (Millipore). Membranes were blocked in blocking solution (5% milk + PBS supplemented with 0.1% Tween20) and then incubated with primary antibody diluted in blocking solution. Secondary antibodies were diluted in blocking solution + 0.01% SDS. Membranes were imaged with a LICOR Odyssey instrument or film. Primary antibodies used in these experiments were αActin (Cell Signaling #4970) and αVif (NIH Reagent Program #6459). Secondary antibodies used were αrabbit IRdye 800CW (LICOR 827–08365), αmouse IRdye 680LT (LICOR 925–68020), αrabbit HRP (Cell Signaling 7074P2), and αmouse HRP (Cell Signaling 7076P2).
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