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10 protocols using catalase

1

Antioxidant Activity of Herbal Extracts

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Dried ripe fruits of Gardenia jasminoides J.Ellis (Fructus Gardeniae) (No. 180525) and the fermented ripe seeds of Glycine max (L.) Merr. (Semen sojae praeparatum) (No. 180716-1) were purchased from Tong Han Chun Tang Chinese Herbal Factory (Shanghai, Chinese). Authenticated by Professor Lu-Ping Qin, Fructus Gardeniae (Voucher number 2018082001) and Semen sojae praeparatum (Voucher number 2018082002) were deposited at the herbarium of pharmaceutical analysis, School of Pharmacy, Second Military Medical University, Shanghai, China. Fluoxetine was purchased from Eli Lilly and Company (China). Sodium carboxymethyl cellulose (CMC-Na) and sucrose were obtained from Sangon Biotech Co., Ltd. (Shanghai). LC-MS grade formic acid, acetonitrile, and methanol were supplied by Honeywell (United States). Urethane was purchased from meilunbio (China). Deionized water was collected by a laboratory water purification system (HITECH Instruments CO., Ltd.). Reactive Oxygen Species, Glutathione and Glutathione disulfide, catalase, glutathione reductase, glutathione peroxidase, and SOD assay kit were purchased from Beyotime (China).
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2

Photothermal Therapy of 4T1 Tumor Using TiCN

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4T1 cells were seeded into a 96-well culture plate (1 × 104/well) or a 6-well culture plate (4 × 105/well) followed by 12 h starvation. Cells were pretreated with Yoda1 (Selleck, China), GSK2795039 (Selleck, China), or catalase (Beyotime, China) for 1 h and then incubated at 37 or 43°C for 5 h. After the heat treatment, the plates were returned to a 37°C incubator for 24 h as recovery. Subsequently, cells were harvested for the following experiments. All incubation temperatures were maintained within ±0.01°C.
As for the experiments of photothermal nanomaterials (TiCN), cells were incubated in a medium with TiCN (100 μg/mL) after 12 h starvation. Then, the cells were given local irradiation with a 1,064 nm laser (0.6 W/cm2) for 7 min/well. After the heat treatment, the plates were returned to a 37°C incubator for 24 h and harvested for the following tests.
In the tumor models, 4T1 cells were used to establish the model, 7 days later, 200 µl of photothermal TiCN (500 µg/mL) were intravenously injected into the 4T1 tumor-bearing mice. One day later, the breast tumors of mice were exposed to a 1,064 nm laser (0.6 W/cm2) for 10 min, and then, the volumes of the tumors were measured daily. Yoda1 was administrated 1 h before laser exposure (1.5 mg/kg, intraperitoneal injection). Ten days later, the mice were sacrificed and the tumors were harvested for measurement.
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3

Mitochondrial Dynamics and Oxidative Stress

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FAC, calcein acetoxymethyl ester (CA-AM), deferiprone (L1) and 2',7'-dichlorofluorescin diacetate (DCFH-DA) were purchased from Sigma-Aldrich (USA). DFO was from Novartis Pharma (Switzerland). NAC, Catalase, Beclin-1, ATG5 and ATG7 were from Beyotime Biotechnology (Shanghai, China). AICAR was from Med Chem Express (USA). AMPK, p-AMPK (Thr172), p-Drp1 (Ser616), p-Drp1 (Ser637), p-ACC (ser79), LC3, GAPDH and VDAC1 were from Cell Signalling Biotechnology (Danvers, MA, USA). MFF was from Abcam (Cambridge, MA, USA). p-MFF (ser155) was generated by YenZym Antibodies (South San Francisco, CA, USA). TOM20 and Drp1 were from Santa Cruz Biotechnology, Inc. (Santa Cruz, CA, USA). Alexa Fluor 594-conjugated goat anti-rabbit IgG (H + L) secondary antibody, Alexa Fluor 488-conjugated goat anti-mouse IgG (H + L) secondary antibody and MitSOXTM Red Mitochondrial Superoxide Indicator were from Thermo Scientific (Rockford, IL, USA).
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4

Catalase, GPx-1, and H2O2 Assay

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The total proteins or supernatants extracted from different examples were subjected to assay of catalase (Beyotime, Shanghai, China, #S0051) and glutathione peroxidase (GPx-1) (Beyotime, Shanghai, China, #S0056) activities as well as intracellular levels of H2O2 (Beyotime, Shanghai, China, #S0038) according to the manufacturer’s instructions.
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5

Cell Culture and Reagent Preparation

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Human cell lines HeLa, ZR-75-1 and MCF-7 were obtained from American Type Culture Collection (Manassas, VA, USA). HCC1937 and OVCAR-3 cells were from the Cell Bank of Chinese Academy of Sciences (Shanghai, China). HeLa and MCF-7 cells were cultured in DMEM and the other cells were in RPMI-1640 media supplemented with 10% fetal bovine serum (Invitrogen, Carlsbad, CA, USA), 100 U/ml penicillin and 100 μg/ml streptomycin (Solarbio Science and Technology; Beijing, China). NAC, SOD and catalase were purchased from Beyotime (Shanghai, China). The γ-secretase inhibitor N-[N-(3,5-difluoropheNACetyl)-L-alanyl]-S-phenylglycine t-butyl ester (DAPT) was from Calbiochem (San Diego, CA, USA). Ammonium chloride (NH4Cl) and lactacystin were from Sigma (St. Louis, MO, USA). Buthionine sulfoximine (BSO) were from Santa Cruz Biotechnology (Santa Cruz, CA, USA). Cytosolic, nuclear, and membrane fractions were extracted by using kits from Beyotime followingthe manufacturer's instructions.
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6

Protective Mechanisms in Proximal Tubular Cells

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Human proximal tubular HK-2 cells (ATCC, Manassas, VA) were maintained in Dulbecco's modified Eagle's medium (DMEM, Gibco, Grand Island, NY) supplemented with 10% fetal bovine serum (Gibco) under standard conditions. The cells were pretreated with 10 mM N-acetylcysteine (NAC) (Beyotime Institute of Biotechnology, Jiangsu), 2000 U/ml catalase (Beyotime Institute of Biotechnology, Jiangsu), 10 μM U0126 (Sigma, St. Louis, MO), 10 μM rapamycin (Calbiochem, La Jolla, CA, USA), and 10 μM chloroquine (Sigma) before the addition of urinary proteins (8 g/l). The cellular ROS production was measured at 2 h, and the expression of LC3 and P62 was quantified at 8 h. The levels of neutrophil gelatinase-associated lipocalin (NGAL) and kidney injury molecule-1 (KIM-1) secretion were tested at 12 h with the Quantikine™ kits (R&D Systems, Minneapolis, Minnesota, USA). The number of apoptotic cells was assayed at 48 h. And the expression of p-ERK and t-ERK was quantified at different time points.
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7

Stimulation and Inhibition of Mouse B Cells

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Human or mouse B cells were cultured in 96-well flat-bottom plates (Corning, Tewksbury, MA, USA) at 5 × 105 cells per well in 200 μl RPMI-1640 (Gibco, Grand Island, NY, USA) supplemented with 10% FBS (Gibco) and antibiotics (penicillin 100 μg/ml, streptomycin 10 μg/ml; Invitrogen Life Sciences, Carlsbad, CA, USA) in a humidified atmosphere of 5% CO2 at 37°C. For stimulation treatment, B cells were divided into four to six groups: Control (grown in normal media), IFN-α (1000 U/ml, eBiosciences, San Diego, CA, USA), R848 (1 μg/ml, Enzo Life Science, Farmingdale, NY, USA), affiniPure F(ab')2 Fragment Goat Anti-Mouse IgM (5 μg/ml, Jackson ImmunoResearch Laboratories, Inc., West Grove, PA, USA) plus anti-CD40 (2 μg/ml, eBiosciences), two joint stimuli (anti-IgM/CD40+R848) and three joint stimuli (anti-IgM/CD40+R848+IFN-α). Each group of B cells was stimulated respectively on the first day, and the culture medium was changed every other day. Mouse B cells without treatment as the control group were collected immediately after isolation from the spleen, and used to compare the target gene or protein expression level. In addition, mouse B cells were exposed to the stimuli after pretreated with inhibitor zVAD-fmk (Merck, Billerica, MA, USA), Necrostatin-1 (Merck) or Catalase (Beyotime, Nantong, China) for 1 h.
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8

Evaluating PAM's Proliferative Effects

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The proliferative ability was detected using Cell Counting Kit-8 (CCK8) (Beyotime, China) proliferation assay according to the manufacture's protocol. Briefly, cells from the 2D culture condition were seeded at a density of 3 × 103 in a 96-well flat-bottom plate and cultured overnight. Cells were treated with 100 μl of PAM (activated with 1, 5, 10, 15, and 20 min by plasma jet) and incubated for 72 h or treated with 100 μl of PAM (activated with 20 min) and incubated for 24, 48, and 72 h. The ROS scavenger N-acetyl-L-cysteine (NAC) (20 μM, Sigma Aldrich) and catalase (0.6 mg/ml, Beyotime Institute of Biotechnology, China) and RNS scavenger, 2- to 4-carboxyphenyl-4,4, 5,5-tetramethylimidazoline-1-oxyl-3-oxide (cPITO, 100 μM, Beyotime Institute of Biotechnology, China) were used to treat cells 1 h pre-PAM treatment. Cell viability was detected by using CCK8, and the absorbance reading at 450 nm was taken by a microplate reader (Multiskan GO, Thermo Scientific). The cell number was counted after 24 h PAM treatment (activated with 20 min) using Trypan Blue under an automated cell counter (Bio-Rad, TC-20). Nontreated cells were used as a control group. All experiments were repeated at least 3 times.
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9

Superoxide Detection Assay in Cells

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Cells were plated in 96-well plates at 5×103 cells per well, cultured and grouped as mentioned for the CCK-8 assay, and were incubated with 200 µl of the superoxide-detecting reagents, including WST-1 and catalase (Beyotime Institute of Biotechnology) at 37°C for 3 min. An automatic microplate reader (ELX-800; BioTek Instruments, Inc.) was used to detect absorbance in 450 nm.
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10

Protective Effects of Polydatin Against Methylglyoxal-Induced Endothelial Dysfunction

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PD was from Chengdu Push Bio-Technology (Chengdu, Sichuan, China). PD was dissolved in dimethyl sulfoxide (DMSO) at a stock solution of 10 mM and directly diluted in medium to appropriate concentrations prior to the experiments. MGO was from Sigma (St. Louis, MO, USA). Primary human umbilical vein endothelial cells (HUVECs) and Medium 200 were from Cascade Biologics (Portland, OR, USA). Terminal deoxynucleotidyl transferase dUTP nick end labeling (TUNEL) kits, total superoxide dismutase (SOD) assay kits, catalase (CAT) assay kits, glutathione peroxidase (GSH-Px) assay kits, 2′,7′-dichlorofluorescein diacetate (DCFH-DA), and 5,5′,6,6′-tetrachloro-1,1′,3,3′-tetraethylbenzimidazolcarbocyanine iodide (JC-1) were from Beyotime Biotechnology (Shanghai, China). Annexin V-fluorescein isothiocyanate (FITC)/propidium iodide (PI) apoptosis detection kits were from BD Biosciences (San Diego, CA, USA). Antibodies to phosphorylated Akt, total Akt, Bax, Bcl-2, cleaved caspase-3, and GAPDH were from Cell Signaling Technology (Beverly, MA, USA). N-acetyl cysteine (NAC), Akt inhibitor, and LY294002 (LY) were from Beyotime Biotechnology. Cyclosporin A (CsA) was from Gene Operation (Ann Arbor, Michigan, USA). All other chemicals and reagents were from Sigma unless otherwise indicated.
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