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3 protocols using cbm 20a

1

HPLC Quantification of Sulfate Ester Hydrolysis

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The respective sulfate ester 3a–6a and 8a was dissolved in Tris/HCl-buffer (1 mL, 100 mm, pH 8.0) and were shaken at 120 °C and 30 rpm for 24 h. The reaction was quenched by freezing in liquid N2 and was thawed individually prior to measurement. Quantification of autohydrolysis was done from calibration curves with the corresponding alcohol and sulfate ester.
All measurements were carried out with a Shimadzu HPLC system (CBM-20A, LC-20AD, DGU-20A5, SIL-20AC, CTO-20AC, SPD-M20A, CBM-20A) by using a ZORBAX 300-SCX (4.6×250 mm) IEX column and UV-detection [diode array detector set at 271 nm (3a), 261 nm (4a), 266 nm (5a), 262 nm (6a) and 259 nm (8a)]. The conversion was determined by using sodium formate buffer (200 mm pH 2.8) at a flow rate of 0.5 mL/min and a run time of 20 min (for retention times see Supporting Information, Table S1).
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2

Ash, Sugars, and Polyphenols Analysis

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Dried ANE samples were placed inside a furnace at 600°C for 6 h in order to obtain and quantify the ash content. Total sugars were quantified according to Rioux et al. (2007) (link). Total polyphenol content was determined spectrophotometrically following the method of Goñi et al. (2018) (link). The content of unidentified organic components was calculated by difference to the total organic amount. The molecular weight (Mw) distribution of carbohydrates from different samples was analyzed using high performance size exclusion chromatography-refraction index detector (HPSEC-RID). The HPSEC Shimadzu system consisted of a system controller CBM-20A, a solvent delivery module LC-20 AD, an online degasser DGU-20A5, an autosampler SIL-20ACHT, a refraction index detector (Varian Prostar 350 RID), and an LC workstation. HPSEC analysis was performed using 4 PL aquagel-OH MIXED-H columns in tandem (8 μm, 300 × 7.5 mm; Agilent). The mobile phase (0.1 M NaAc/0.1 M Na2SO4 buffer pH 7.8) was used as isocratic elution at room temperature. The flow rate and injection volume were set to 1 ml min−1 and 40 μl, respectively. Mw values were calculated from the measured retention times through a calibration curve made with dextran standards.
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3

Analysis of Seaweed Carbohydrate MW Distribution

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The molecular weight (Mw) distribution of carbohydrates of the four brown seaweed extracts was detected and measured using high-performance size exclusion chromatography with a refraction index detector (HPSEC-RID). The HPSEC Shimadzu system consisted of a system controller CBM-20A, a solvent delivery module LC-20AD, an online degasser DGU-20A5, an autosampler SIL-20ACHT, a refraction index detector (Varian Prostar 350 RID) and an LC workstation. HPSEC analysis was performed using PL aquagel-OH MIXED-H columns (8 μm, 300 × 7⋅5 mm; Agilent). The mobile phase (0⋅1 M NaAc/0⋅1 M Na2SO4 buffer, pH 7⋅8) was used as the isocratic elution at room temperature. The flow rate and injection volume were set to 1 ml/min and 40 μl, respectively. A molecular weight calibration curve was constructed with the retention time values of known dextran standards (Sigma-Aldrich, MO, USA). For the analysis of the extracts, the measurable range was divided into four segments (>100, 50–100, 10–50 and <10 kDa). An average Mw for each extract within each range was determined, and relative peak area values were calculated using the LCsolution software (Shimadzu, Ireland).
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