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9 protocols using methanol lichrosolv

1

Phytochemical Analysis of Centaurea raphanina

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For the preparation of the decoctions, distilled water was used. LC-MS grade solvents were used for the phytochemical analysis of the extracts: Acetonitrile (Carlo Erba Reagents, Val de Reuil, France), Formic Acid OptimaTM (Fisher Chemical, Pittsburg, PA, USA), Methanol LiChrosolv® (Merck, Burlington, MA, USA), and Ultrapure water from a Direct-Q® Water Purification System (Merck). For the fractionation of the Centaurea raphanina’s extract, analytical grade solvents (n-butanol, ethyl acetate, dichloromethane, and methanol) were employed.
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2

Spectrophotometric Determinations Using Milli-Q

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Methanol p.a. and methanol LiChrosolv® were from Merck KGaA (Darmstadt, Germany). Formic acid was purchased from VWR (Fontenay-sous-Bois, France).
Purified water was treated in a Milli-Q water purification system (Millipore, Bedford, MA, USA). Spectrophotometric determinations were performed in a Multiskan™ GO microplate spectrophotometer (Thermo Fisher Scientific Oy, Vantaa, Finland).
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3

Caco-2 Cell Permeability of Flavonoids

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Orientin, isoOrientin, vitexin, isovitexin, schaftoside, isoschaftoside, luteolin, apigenin, and quercetin (>95%, reference substances) were purchased from Phytolab (Vestenbergsgreuth, Germany). Caco-2 cells were obtained from the ATCC (American Type Culture Collection, Manassas, VA, USA). Acetonitrile (LiChrosolv®), trifluoroacetic acid (TFA), dimethyl sulfoxide (DMSO), formic acid, sodium acetate, sulfatase (from Helix pomatia, type H-1, lyophilized, >10,000 U/g), β-glucuronidase (from bovine liver, type B-10, 10,100 U/g) methanol (LiChrosolv®), 3-(4,5-dimethylthiazolyl)-2,5-diphenyl tetrazolium bromide (MTT), and sodium dodecyl sulfate (SDS) were purchased from Merck (Darmstadt, Germany). Hanks’ balanced salt solution (HBSS) was obtained from Biowest (Nuaillé, France). Dulbecco’s modified Eagle medium (DMEM) was purchased from Life Technologies (Carlsbad, CA, USA). Phosphate-buffered saline (PBS), fetal bovine serum (FBS), trypsin-ethylenediaminetetraacetic acid (trypsin-EDTA), nonessential amino acids (NEAAs), penicillin, and streptomycin were purchased from Biochrom AG (Berlin, Germany). Transwell® plates (insert diameter 12 mm, pore size 3.0 µm, membrane growth area 1.12 cm2) were obtained from Corning Costar (Cambridge, MA, USA), and 96-well plates were purchased from TPP (Trasadingen, Switzerland).
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4

Lipid Nanoparticle Preparation Protocol

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Ammonium acetate (NH4OAc, ≥99.99%), ammonium hydroxide (ACS reagent) and Tween 20 (BioXtra) were from Sigma Aldrich (Steinheim, Germany). Chloroform (Spectronorm) was obtained from VWR (Roncello, Italy), Methanol (LiChrosolv) from Merck (Darmstadt, Germany). Atto633-COOH was purchased from Atto Tec (Siegen, Germany). Nitrogen gas was from Messer (Gumpoldskirchen, Austria). The lipids 1,2-dipalmitoyl-sn-glycero-3-phosphocholine (16:0 PC, DPPC), 1,2-dioctadecanoyl-sn-glycero-3-phosphoethanolamine (18:0 PE, DSPE), 1,2-distearoyl-sn-glycero-3-phosphoethanolamine-N-[methoxy(polyethylene glycol)-2000] (ammonium salt) (18:0 PEG2000 PE, DSPE-PEG2000) and cholesterol (Chol) were from Avanti Polar Lipids (Alabaster, AL, USA obtained via Instruchemie, Delfzyl, The Netherlands). Water was of Millipore grade (18.2 MΩ cm resistivity at 25 °C). NH4OAc (40 mmol L–1, pH 8.4) filtered through a 0.2 μm pore size syringe filter (surfactant free cellulose acetate membrane from Sartorius, Göttingen, Germany) was used as aqueous electrolyte.
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5

Quantitative Analysis of Arginine Derivatives

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Standards (NG,NG-dimethyl-l-arginine dihydrochloride ≥98 %; NG,NG'-dimethyl-l-arginine di(p-hydroxyazobenzene-p'-sulfonate) ≥ 99 %) were purchased from Merck KGaA (Darmstadt, Germany).

The internal standard for ADMA (NG,NG-dimethyl-d6-arginine dihydrochloride 98 atom % D, 95 % (CP)) was purchased from Merck KGaA (Darmstadt, Germany). The standard for SDMA (NG,NG'-dimethyl-l-arginine-d6 98 atom % D; 95 % (CP)) was obtained from Santa Cruz Biotechnology, Inc. (Dallas, Texas, USA).

Solvents (methanol LiChrosolv®; acetonitrile LiChrosolv®) and chemicals (acetic acid LiChropur®; ammonium acetate LiChropur®; 1 M HCl-1-butanol LiChropur®) were purchased from Merck KGaA (Darmstadt, Germany).

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6

Quantification of Sulfuric Acid by HPLC

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The solvents utilized as mobile phase was methanol Lichrosolv, HPLC grade (Merck) and ammonium acetate (Merck) and SA (99.6%) standard, purchased from Sigma-Aldrich. 320°C at flow rate of 10 L.min -1 and pressure of 60 psi with Helium as collision gas. Retention time of SA was 3.2 minutes. A t test was performed to compare the amount of SA in both extracts (*P<0.05). In order to evaluate the method precision, SA samples were analyzed in ten replicates.
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7

Phytochemical Analysis of Plant Extracts

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White medium [75 ], sucrose, casein hydrolysate and agar (plant tissue micropropagation culture grade) were from PhytoTechnology Laboratories (Lenexa, KS, USA). LiChrosolv® Methanol was supplied by Merck (Darmstadt, Germany). Formic acid was purchased from Baker (New Jersey, USA). Ultrapure water was generated with a Barnstead Thermo Scientific™ (Waltham, MA, USA). Quercetin-3-rhamnoside (Q-3-O-Rh) was from Extrasynthese (Lyon, France); catechin (C), quercetin-3-O-glucoside (Q-3-O-G), quercetin-3-O-xyloside (Q-3-O-X), quercetin-3-O-arabinofuranoside (Q-3-O-AF), quercetin-3-O-arabinopyranoside (Q-3-OAP), and chlorogenic acid (CA) were from Sigma (St. Louis, MO, USA). The other chemicals, standards, and solvents were purchased from Sigma-Aldrich (Saint Louis, MO, USA).
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8

Determination of Phenolic Compounds

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Salicylic acid (SA), 2,4-dihydroxybenzoic acid (2,4-DHBA) and 3,4-dihydroxybenzoic acid (3,4-DHBA) standards were purchased from Fluka (Budapest, Hungary). 2,3-Dihydroxybenzoic acid (2,3-DHBA) and 2,5-dihydroxybenzoic acid (2,5-DHBA) standards and acetic acid were obtained from Sigma-Aldrich (Budapest, Hungary). LiChrosolv methanol was produced by Merck KGaA (Darmstadt, Germany). Analytical reagent grade diethyl ether and perchloric acid, furthermore puriss grade sodium dihydrogen phosphate (NaH2PO4, anhydrous) and disodium hydrogen phosphate (Na2HPO4 x 2 H2O) were purchased from Spektrum-3D (Debrecen, Hungary). Analytical reagent grade disodium salt of ethylenediaminetetraacetic acid (Na2EDTA), iron(II) ammonium sulphate (Fe(NH4)2(SO4)2 x 6 H2O) and sodium sulphate (Na2SO4, anhydrous) were obtained from Reanal (Budapest, Hungary). Analytical reagent grade ascorbic acid was purchased from Molar Chemicals (Budapest, Hungary). Distilled water was purified in the Institute of Pharmaceutical Chemistry, University of Pécs. Mobile phases used for HPLC were degassed in ultrasonic bath (Realsonic cleaner) and filtered through ROBU-GLASS filter before use.
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9

HPLC-Based Chemical Analysis Protocol

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Water (HPLC gradient grade) was purchased from J.T. Baker (Deventer, The Netherlands). Pestinorm® Supra Trace ethyl acetate was purchased from VWR Chemicals (Leuven, Belgium). LiChrosolv® methanol (hypergrade for LC-MS), potassium carbonate (pro analysi grade) and calcium carbonate (pro analysi grade) were obtained from Merck KGaA (Darmstadt, Germany). Sodium sulphite (puriss p.a., ACS grade) and hydrogen peroxide solution (≥ 30%, trace analysis grade) were obtained from Sigma-Aldrich (St. Louis, USA). Rotipuran® formic acid (≥98%, p.a., ACS grade), Rotipuran® hydrochloric acid (37%, p.a., ACS, ISO grade) and Pufferan® TRIS hydrochloride (≥ 99%, p.a. grade) were purchased from Carl Roth GmbH + Co. KG (Karlsruhe, Germany). Proteinase K was purchased from Qiagen GmbH (Hilden, Germany).
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