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Unity 400 spectrometer

Manufactured by Agilent Technologies
Sourced in United States

The Unity 400 spectrometer is a laboratory instrument designed to analyze the composition and properties of materials. It utilizes spectroscopic techniques to provide quantitative and qualitative data about the sample under investigation. The core function of the Unity 400 is to measure and detect the absorption, emission, or scattering of electromagnetic radiation by the sample, enabling the identification and characterization of its chemical constituents.

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13 protocols using unity 400 spectrometer

1

Characterization of Tannic Acid Compounds

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Isolation procedures and purity of compounds were checked by thin layer chromatography (TLC, Merck Millipore, Billerica, MA, USA) visualized by UV light, and sprayed with Ce(SO4)2·2(NH4)2SO4·2H2O. All 1H, 13C, and 2D-NMR experiments were recorded on acetone-d6, on a Varian Unity 400 spectrometer (Varian, Palo Alto, CA, USA), at 400 MHz for 1H-NMR, and at 100 MHz for 13C-NMR. EI-EM spectra were recorded on a JEOL JMX-AX 505 HA mass spectrometer (Jeol Ltd., Tokyo, Japan). All the reagents and solvents used were of analytical grade. Tannic acid (CAS: 1401-55-4) was purchased from Sigma Aldrich (St. Louis, MO, USA).
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2

Isolation and Purification of Bioactive Compounds

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The supernatant extract was applied to a reverse phase silica gel Polygoprep 100–50 C18 VFC (vacuum flash chromatography) system, using stepwise gradient elution from H2O to MeOH. The active fraction (2.72 g) was eluted with H2O-MeOH 1:9 and was subjected to preparative reversed-phase HPLC equipped with a Symmetry C18 column (19 × 150 mm, 7 μ) and using a linear gradient of H2O/CH3CN from 5% to 100% of CH3CN in 60 min at a flow rate of 15 mL/min. The active fractions were further purified by a semi-preparative HPLC on a Symmetry C18 column (7.8 × 150 mm, 7 μ) using isocratic elution with H2O/CH3CN 55:45 at a flow rate of 3 mL/min to yield 80 mg of the pure compound 1, 94 mg of compound 2 and 44 mg of compound 3. NMR spectra were recorded on a Varian “Unity 500” spectrometer at 500/125 MHz (1H/13C) and on a Varian Unity 400 spectrometer at 400/100 MHz (1H/13C). Chemical shifts were reported in ppm using residual CDCl3 (δ 7.26 ppm for 1H and 77.0 ppm for 13C) as an internal reference. Two-dimensional experiments COSY, TOCSY, HSQC, and HMBC were performed using standard pulse sequences. Data were processed using MestReNova 14.0.1 software. (+)-ESIMS spectra obtained on an Agilent 1100 Series LC/MSD spectrometer. High-Resolution Mass Spectroscopy (HRMS) was performed on an Agilent 6230 TOF LC/MS system using the ESIMS technique.
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3

General Analytical Techniques for Researchers

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Example 1

General. TLC: precoated (0.2 mm) silica gel 60 F254 plates from EM Laboratories, Inc.; detection by UV light (254 nm). M.p.: Electrothermal IA9100 digital melting-point apparatus; uncorrected. 1H and 13C NMR spectra: Varian-Unity-400 spectrometer at 400 and 100 MHz or Varian-Gemini-200 spectrometer at 200 and 50 MHz, chemical shifts 8 in ppm with SiMe4 as an internal standard (=0 ppm), coupling constants J in Hz. Elemental analyses were carried out on a Heraeus CHN—O-Rapid elemental analyzer, and results were within ±0.4% of calculated values.

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4

Characterization of Novel Compounds

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Unless otherwise mentioned,
commercially available reagents were purchased from Sigma-Aldrich
and Acros Organics without further purification. Solvent purification
was according to Purification of Laboratory Chemicals.700 All reactions were carried out under
Ar atmosphere and were monitored by thin layer chromatography (TLC)
using precoated Merck silica gel 60 F254 alumina plates (0.25 mm).
Visualization was accomplished using ultraviolet light (256 and 365
nm). Column chromatography was carried out using silica gel (230–400
mesh) supplied by Merck. 1H, 13C, 19F, 31P, and 11B NMR spectra were recorded at
298 K on a Varian Unity 400 spectrometer; the chemical shifts (δ
in ppm) are reported with DMSO-d6
2.50 for 1H NMR and δ 39.52 for 13C NMR),
CDCl3 (δ 7.26 for 1H NMR and δ 77.06
for 13C NMR), or CD3OD (δ 3.31 for 1H NMR and δ 49.00 for 13C NMR) as internal
references. Single crystal X-ray diffraction data was collected on
a Bruker D8 VENTURE diffractometer equipped with Oxford Cryostream
800+. High-resolution mass spectra (HRMS) were obtained using the
electrospray ionization (ESI) method or fast atom bombardment (FAB)
method with AB SCIEX QSTAR XL.
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5

Chromatographic Purification and NMR Analysis

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All reactions were performed under nitrogen saturated. Commercially available reagents were used without drying. Chromatographic separation was carried out using silica gel from Merck (230–400 mesh). 1H and 13C NMR spectra were measured with a Varian Unity 400 spectrometer at 400 and 100 MHz, respectively. The chemical shifts (δ) and the coupling constants (J) were recorded in parts per million (ppm) and in Hertz (Hz), respectively.
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6

Cytotoxicity and Oxidative Stress Assays

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WY14643, GW501516, rosiglitazone, MTT, H2O2, cytotoxicity detection kit PLUS (LDH), Hoechst 33342, and 2,7-dichlorofluorescein diacetate (DCFDA) were purchased from Sigma-Aldrich (St. Louis, MO, USA). Rhodamine 123 was purchased from Enzo Life Sciences, Inc. (Burlington, ON, Canada). The SOD and CAT assay kits were purchased from DoGenBio (Guro-gu, Seoul, Korea). Monoclonal rabbit antibodies for cleaved-caspase 3, 7, and 9; cleaved-PARP; caspase 3 and 7; and PARP, as well as monoclonal mouse antibodies for caspase 9 were purchased from Cell Signaling Technology (Beverly, MA, USA) and the dilution was 1:1000. High performance liquid chromatography (HPLC) was performed using a Gilson 307 pump, Shodex RI-71 detector, and ODS column (YMC-Triart C18, 250 × 10.0 mm, i.d. 5 μm). 13C NMR spectra were obtained using a Varian UNITY 400 spectrometer and 1H NMR spectra were recorded using a Varian INOVA 500 spectrometer. Optical rotation was detected using a Jasco P-1020 polarimeter.
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7

Characterization of Synthesized Compounds

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Melting points were determined on an IA9100 melting point apparatus (Dubuque, IA, USA) and are uncorrected. Nuclear magnetic resonance (1H and 13C) spectra were recorded on a Gemini 200 or Unity-400 spectrometer (Varian, Palo Alto, CA, USA). Chemical shifts were expressed in parts per million (δ) with tetramethylsilane (TMS) as an internal standard. Analytical TLC was performed on Art. 5554 Kieselgel 60 GF254 produced by Merck (Darmstadt, Germany) and the spots of compounds were detected with UV light indicator irradiated at 254 and 366 nm. Art. 7734 Kieselgel 60 GF254 (70–400 mesh, Merck) was used for column chromatography. The elemental analyses were performed in the Instrument Center of National Science Council at National Cheng-Kung University and National Taiwan University using Heraeus CHN-O Rapid EA, and all values are within ± 0.4% of the theoretical compositions.
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8

Physical and Spectral Characterization Methods

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Melting points were determined on a Fisher Johns melting point apparatus. The infrared spectra were measured on a Bruker Vector 22 spectrometer. GC-MS spectra were acquired using an Agilent 6890 series GC system and Agilent 5973 mass selective detector, employing a fused-silica column, 30 m × 0.32 mm HP-5MS (cross-linked 5% Ph Me silicone, 0.25 μm film thickness). The temperature of the column was varied from 40 to 250°C with a slope of 10°C/min and a stay of 5 min at this temperature. All NMR spectra were recorded on a Varian Unity 400 spectrometer at 400 MHz for 1H NMR, and 100 MHz for 13C NMR using DMSO-d6 and CDCl3 as solvents. Open column chromatographies were carried out on silica gel 60 (70–230 and 230–400 mesh [Merck]). Preparative TLC was performed on precoated silica gel 60 F254 plates (Merck).
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9

NMR Analysis of Organic Compounds

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The 1H-NMR analysis of samples was performed at 400 MHz on a Varian Unity 400 spectrometer. All samples were dissolved in either deuterated DMSO or D2O.
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10

Characterization of Organic Compounds

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Example 1

General. TLC: precoated (0.2 mm) silica gel 60 F254 plates from EM Laboratories, Inc.; detection by UV light (254 nm). M.p.: Electrothermal IA9100 digital melting-point apparatus; uncorrected. 1H and 13C NMR spectra: Varian-Unity-400 spectrometer at 400 and 100 MHz or Varian-Gemini-200 spectrometer at 200 and 50 MHz, chemical shifts δ in ppm with SiMe4 as an internal standard (=0 ppm), coupling constants J in Hz. Elemental analyses were carried out on a Heraeus CHN-O-Rapid elemental analyzer, and results were within ±0.4% of calculated values.

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