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5 protocols using anti phospho akt

1

Molecular Mechanisms of Glioblastoma Response to Temozolomide

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Reagent and antibody sources were as follows: AG1478 (Calbiochem/Merck, Darmstadt, Germany), BMP4 (R&D Systems, Minneapolis, MN, USA), DAPI (4′,6-diamidino-2-phenylindole dihydrochloride), MTT (3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide), temozolomide (TMZ) and anti-β-Actin-peroxidase conjugated antibody (Sigma-Aldrich, Munich, Germany), anti-AKT, anti-phospho-AKT (Ser473), anti-phospho-AKT (Thr308), anti-BIM, anti-cleaved caspase 3, anti-cleaved caspase 7, anti-cleaved PARP (poly (ADP-ribose) polymerase-1), anti-EGF Receptor, anti-phospho-EGF receptor (Tyr1068), anti-FOXO3a, anti-phospho-FOXO3a (Thr32), anti-phospho-FOXO3a (Ser253), anti-phospho-FOXO3a (Ser318/321), anti-phospho-Rb (Ser807/811), anti-SMAD1, anti-SMAD3, anti-SMAD4, anti-SMAD5, anti-phospho-SMAD1/5 (Ser463/465), anti-phospho-SMAD3 (Ser423/425), anti-p27Kip1, anti-SOX2 (Cell Signaling Technology, Beverly MA, USA), anti-OLIG2, anti-β-Tubulin beta III isoform (Millipore, Temecula, CA, USA), anti-CYCLIN B1, p21CIP1 (Santa Cruz Biotechnology, Dallas, Texas, USA), anti-GFAP (BD Pharmingen San Jose, CA), anti-NESTIN (R&D Systems, Minneapolis, MN, USA), and anti-CYCLIN D1 (ThermoFisher Scientific, Waltham, MA USA).
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2

Western Blot Antibody Profiling

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Western blot analysis was carried out as previously interpreted [23 (link), 24 (link)]. Primary antibodies in this experiment comprised of: anti-Sirt6 (Sigma), anti-phosphor-PI3 Kinase p110α, anti-phospho-AKT(Ser473), anti-total pan-AKT, anti phospho-mTOR, and anti-total pan-mTOR, anti-PTEN, anti-phospho-4EBP1, anti-FoxO1, anti-HIF-1α, anti-PARP [specific to the full-length (116 kDa) and the cleaved form (89 kDa) of PARP], anti-p27, anti-CDK2, anti-phospho-ATM, anti-phospho-ATR, anti-phospho-Chk1 (Ser345), anti-phospho-Chk2 (Thr68) and anti-β-tubulin (Cell Signaling Technology, MA, USA), β-actin (Zhongshan Goldenbridge, Beijing, China). Details are shown in Supplementary methods.
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3

Western Blot Analysis of Placental Proteins

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Placental homogenates and PHT cell lysates were loaded and proteins separated on 4–12% Bis-Tris gels (Invitrogen) or 12% Mini-Protean protein gels (Bio-Rad) and transferred onto 0.20-μm nitrocellulose membrane (GE Healthcare) or polyvinylidene fluoride membrane (Bio-Rad). Membranes were incubated with primary antibodies: rabbit anti-4EBP-1, anti-phospho-4EBP-1 (Thr37/46), anti-ribosomal protein S6, anti-phospho-ribosomal protein S6 (Ser235/236), anti-Akt, anti-phospho-Akt (Ser473), and mouse anti-β-actin (Sigma-Aldrich). Horseradish peroxidase-conjugated secondary anti-rabbit and anti-mouse antibodies (Cell Signaling) were used as secondary antibodies. Proteins were visualized using chemiluminescence detection. Densitometry was performed using NIH’s ImageJ software.
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4

Regulation of FOXO3, p21, and Cyclin D1 by miR-629 in Capan-2 Cells

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After 48 h of transfection with miR-629-mimic and miR-629-inhibitor (400 nM), Capan-2 cells were harvested, and then 80 pg of total protein extract was separated on 10% SDS-PAGE gels and transferred to PVDF membranes (BD Biosciences). The membrane was probed with monoclonal anti-FOXO3 and anti-p21 antibodies (1 : 500, Santa Cruz Biotechnology, Santa Cruz, CA, USA), as well as with anti-Cyclin D1 (1 : 500, Cell Signaling, Shanghai, China), anti-AKT, anti-phospho-AKT, anti-GSK3β, anti-phospho-GSK3β, and anti-β-actin (1 : 1000, Sigma–Aldrich, St.Louis, MO) antibodies. The membrane was further probed with peroxidase-conjugated secondary antibodies at optimized concentrations, and the protein bands were visualized using enhanced chemiluminescence (Amersham Pharmacia Corp., Piscataway, NJ, USA).
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5

Western Blot Analysis of Metabolic Proteins

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Cells were lysed using radioimmunoprecipitation assay buffer (RIPA buffer; 50 mM Tris−HCl, 150 mM sodium chloride (NaCl), 1% NP−40, 0.1% sodium dodecyl sulfate (SDS), a protease inhibitor cocktail, 50 mM sodium fluoride, and 0.2 M sodium orthovanadate). After centrifugation (12,000× g for 15 min), the protein concentration of the supernatant was measured. The proteins in the cell lysate were measured using the Braford assay. Next, 20 μg of protein from each sample was electrophoresed on 10% acrylamide SDS−polyacrylamide gel electrophoresis and transferred to a nitrocellulose membrane (Millipore, Burlington, MA, USA). Membranes were then blocked in 5% skimmed milk for 1 h at room temperature and incubated with primary and secondary antibodies. The primary antibodies were anti−UCP1 (Abcam, Waltham, MA, USA), anti−PGC1α (Boster Bio, Pleasanton, CA, USA), anti−adipose triglyceride lipase (ATGL; Boster Bio), anti−phospho hormone−sensitive lipase (HSL; Cell Signaling, MA, USA), anti−TFAM (Invitrogen, Carlsbad, CA, USA), anti−NRF1 (Invitrogen), anti−AMPK (Cell Signaling), anti−phospho−AMPK (Cell Signaling), anti−AKT (Cell Signaling), anti−phospho−AKT, and β−actin (Sigma−Aldrich); proteins were visualized using chemiluminescent HRP substrate (Advansta Inc., San Jose, CA, USA).
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