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6 protocols using anti β tubulin

1

Immunoblotting Protein Expression Analysis

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Immunoblotting was performed as previously described [9 (link)]. In brief, whole protein lysates were separated by SDS/PAGE and transferred to nitrocellulose membranes (Whatman, Dassel, Germany). Membranes were incubated with the following primary antibodies diluted in 5% Milk/TBST-containing blocking solution overnight: anti-KPNA2 (rabbit polyclonal, 1:2000; abcam, Cambridge, UK), anti-stathmin (rabbit monoclonal, 1:1000; abcam), anti-E2F1 (rabbit polyclonal, 1:200; Santa Cruz, Heidelberg, Germany), anti-TFDP1 (rabbit polyclonal, 1:500; abcam), anti-ATF-2 (rabbit polyclonal, 1:200; Santa Cruz), anti-FBP-1/2 (goat polyclonal, 1:200; Santa Cruz), anti-c-JUN (rabbit monoclonal, 1:2000; Cell Signaling Technology, Frankfurt, Germany), anti-HMOX1 (rabbit monoclonal, 1:10,000; abcam), anti-GTSF1 (goat polyclonal, 1:200; Santa Cruz), anti-PARP (rabbit polyclonal, 1:500; Cell Signaling Technology), anti-β-tubulin (mouse monoclonal, 1:1000; Becton, Dickinson and Company, Franklin Lakes, USA) and anti-β-actin (mouse monoclonal, 1:10,000; MP Biomedicals, Illkirch, France). Blots were incubated with fluorescence-conjugated secondary antibodies (LI-COR Bioscience, Bad Homburg, Germany) for one hour and detection was performed using the Odysee Sa Infrared Imaging System (LI-COR Bioscience).
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2

Western Blot Analysis of SMN Protein

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Spinal cord slices were collected in lysis buffer, homogenated, and quantified by BCA assay. Equal amounts of protein (20 μg/well) were resolved in SDS-PAGE and transferred to nitrocellulose membrane. Membranes were blocked with 6% non-fat dry milk in phosphate buffered saline (PBS) for 1 h at room temperature (RT) and incubated overnight with the corresponding primary antibody diluted in blocking buffer (SMN, 1:500, BD Biosciences and anti-β-tubulin, Becton-Dickinson). After several washes, membranes were incubated for 1 h with an appropriate secondary antibody. Blots were developed using a chemoluminiscent mix and exposed to enzymatic chemoluminiscence (ECL) films (Amersham Pharmacia Biotech). Densitometry was carried out using ImageJ software.
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3

Immunoblotting Analysis of EMT Markers

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Immunoblotting were executed as described previously.47 (link) Simply, cells were washed with PBS and lysed in RIPA buffer (Invitrogen) added protease inhibitor (Sigma). Protein concentration of each sample was calculate by BCA protein assay kit (Thermo Fisher Scientific) to equal protein loading. Equivalent protein were underwent to SDS-PAGE, shifted to polyvinylidene fluoride membrane, interdicted in 5% skim milk for about 2 h at about 25 °C, then checked with relative primary antibodies. The following antibodies were used for analysis: anti-E-cadherin, anti-N-cadherin, anti-Vimentin and anti-SOX2 (Abcam plc, Cambridge, UK), anti-Nanog (Cell Signaling, Beverly, MA, USA), anti-β-actin (Sigma) and anti-β-tubulin (BD Biosciences, CA, USA). β-actin and β-tubulin was served as loading controls. Horseradish Peroxidase (HRP) Secondary Antibodies (Abcam) and an ECL Chemiluminescence Detection Kit (Thermo Fisher Scientific) were used to test combined antibody.
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4

Western Blot Analysis of Epithelial-Mesenchymal Transition Markers

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Total lysates from cells under the different experimental conditions were separated on 7.5% polyacrylamide denaturing gels and blotted onto nitrocellulose membranes (GE Healthcare Life Science, Little Chalfont, United Kingdom), which were reacted with antibodies directed against E-cadherin (sc-7870), Vimentin (sc-373717), and β-Catenin (sc-7963) from Santa Cruz Biotechnology (Santa Cruz, CA, USA); against Akt2 (#3063), p-Akt2 (Ser474, #8599), p-GSK-3β (Ser9, #5558), GSK-3β (#9315), p-p70 S6 Kinase (Thr389, #9205), and p70 S6 Kinase (#9202) from Cell Signaling Technology (Danvers, MA, USA); and against Akt1 (#610860, BD Biosciences), anti-p-Akt1 (Ser473, #05-739), and anti-β-Tubulin (#T4026), following previously reported procedures [27 (link)]. The immunocomplexes were detected by using a WESTAR NOVA 2.0 (Cyanagen, Bologna, Italy), and the chemiluminescence-derived bands were captured with an ImageQuantTM LAS 4000 imager (GE Healthcare Life Science) and quantified with Image Quant TL software v7.0 (GE Healthcare Life Science), as previously reported [27 (link)].
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5

Monoclonal Antibody Characterization Protocol

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Monoclonal antibodies (MAbs) 13-2 and 13-3 have been previously described (54 (link)). Anti-FLAG was from Sigma. Monoclonal antibody to Lamp1 was obtained from the Developmental Studies Hybridoma Bank. Anticalnexin and anti-GM130 were from Abcam. Antimonoubiquitin and antipolyubiquitin were from Enzo Life Sciences, and anti-β-tubulin was from BD Pharmingen. Secondary antibodies [anti-mouse Alexa Fluor 488, anti-rabbit Alexa Fluor 594, or peroxidase-conjugated F(ab′)2 donkey anti-mouse IgG] were from Jackson ImmunoResearch.
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6

Western Blot Analysis of Signaling Proteins

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Firstly, the PFC and HPC tissues were homogenized in cold lysis buffer (0.05M Tris-HCl pH7.4, 0.15M NaCl, Triton X-100 1%, Glycerol 10% and EDTA 0.001M). Homogenates were kept on ice for 30 min and centrifuged at 15,000 rpm for 15 min, and the supernatant was collected to determine the protein concentration. The lysate protein concentration was detected using DC TM Protein Assay (Bio-Rad; Barcelona, Spain). Membranes were incubated overnight at 4 ºC with primary antibodies (see Table 2): Anti-β-Tubulin (anti-mouse, 1:5000, BD Biosciences), Anti-Phospo CREB (anti-rabbit, 1: 1000, Merck Milipore, Spain), Anti-CREB (anti-rabbit, 1: 500, Merck Milipore, Spain) and Anti-TrkB (anti-rabbit, 1:500, EMD Milipore Corp, USA). After washing with TBS/T, blots were incubated with their respective HRP-conjugated antibodies: anti-mouse (1:2500, Rockland) and anti-rabbit (1:2500, Abcam). Blots were developed using the ECL system (ECL Plus, Amersham Biosciences). For comparative purposes, control values were normalized to 100% and the respective protein expression values were adjusted according to the normalization factor.
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