The largest database of trusted experimental protocols

14 protocols using anti vinculin

1

Western Blot Analysis Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
Western blot was performed as previously described [24 (link)]. The primary antibodies used were: anti-CHRNB2 (Abcam, ab41174) for Fig. 5, anti-CHRNB2 (Santa Cruz, sc-58596) for other figures, anti-N-Cadherin (Proteintech, 22018–1-AP), anti-Vimentin (Proteintech, 10366–1-AP), anti-β-catenin (CST, 8480), anti-Cyclin D1 (Abcam, AB16663), anti-CD44 (Proteintech, 15675–1-AP), anti-C-Myc (CST, 5605), anti-SNAIL1(Proteintech, 13099–1-AP), anti-SNAIL2 (Proteintech, 12129–1-AP), anti-Vinculin (Proteintech, 66305–1-Ig) and anti-GAPDH (Proteintech, 10494–1-AP). Quantitative analysis of Western Blot was performed by ImageJ software. Fold changes under individual blots represented the ratio to relevant control (numbers in italic font).
+ Open protocol
+ Expand
2

SDS-PAGE and Immunoblotting Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells were lysed using 1× SDS loading buffer (50 mM Tris‐HCl pH6.8, 10% glycerol, 2% SDS, 0.05% bromophenol blue and 1%2‐mercaptoethanol).Antibodies were listed as follows: anti‐HNF1B antibody (Proteintech), anti‐Cyclin D1 (610 181, BD Transduction Laboratories), anti‐SMAD6, anti‐p‐SMAD2/3, anti‐FLAG (Proteintech), anti‐Vinculin (Proteintech) and anti‐tubulin (Abcam). For immunoblot, proteins were separated by SDS–PAGE and transferred to polyvinylidene difluoride membranes (Millipore). HRP‐conjugated secondary antibodies (Jackson laboratories) and enhanced chemiluminescence system were used for signal detection. Protein was visualized using KODAK film machine or ChemiDoc XRS chemiluminescence detection and imaging system (Bio‐Rad Laboratories).
+ Open protocol
+ Expand
3

Immunofluorescence Imaging of S100A14 and Vinculin

Check if the same lab product or an alternative is used in the 5 most similar protocols
The cells were grown on glass slides, washed with PBS, and fixed in 4% paraformaldehyde for 10 min. After 1 h blocking with 5% BSA (Amresco, Solon, OH, USA), the slides were incubated with anti-S100A14 (1:100, Proteintech) and anti-Vinculin (1:100, Proteintech) followed by goat anti-mouse-TRITC-conjugated IgG (1:100, ZSGB-BIO) or goat anti-rabbit-Cy5-conjugated IgG (1:100, Abcam). After the slides were washed, they were studied using a confocal fluorescence imaging microscope (LSM780, ZEISS, Göttingen, Germany).
+ Open protocol
+ Expand
4

Western Blot Analysis of ACE2 and TMPRSS2

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cell pellets were resuspended in standard RIPA buffer (cat # R0278, lot # SLBL7395V) on ice for 30 min, collected by centrifugation, and quantified using standard BCA assay. Proteins were resolved by 4–20% gradient PAGE and transferred using semi-dry transfer apparatus (Bio-Rad, Hercules, CA) onto Immobilon-P PVDF membranes (cat # IPVH00010). Membranes were blocked in Pierce Protein-Free T20 (TBS) Blocking Buffer (Thermo Fisher, cat # 37571) and washed using TBS with 0.1% Tween-20. We probed membranes with either polyclonal # AF933 (lot # HOK 0320032; 1:200; R&D Systems, Minneapolis, MN) or polyclonal # 21115-1-ap (1:2000; ProteinTech) anti-ACE2 antibodies. Other antibodies used were anti-TMPRSS2 # 14437-1-AP (1:500; ProteinTech), anti-vinculin # CP74, or anti-β-actin # A5441. Secondary antibodies were HRP-conjugated anti-goat # 305-035-003 (lot # 145804; Jackson ImmunoResearch, West Grove, PA); anti-mouse # NA931V (lot # 9715064, GE Healthcare, Chicago, IL); and anti-rabbit # NA9340V (lot # 10997954, GE Healthcare).
+ Open protocol
+ Expand
5

Cellular Behavior on TiO2 Surfaces

Check if the same lab product or an alternative is used in the 5 most similar protocols
Morphology and morphometry of cells on TiO2 surfaces of all groups were examined after 24 hours following cell seeding to evaluate the cellular spreading and cytoskeletal arrangement of the cultured cells using confocal laser scanning microscopy. Cells were fixed in 10% formalin and confocal microscopic images of cells stained with 4′,6-diamidino-2-phenylindole (DAPI) to detect the nucleus (keygentec), antivinculin to detect vinculin protein within the cytoplasm (Proteintech), and rhodamine phalloidin for actin filaments (beyotime.inc).
+ Open protocol
+ Expand
6

Immunofluorescence Staining of Tissue Samples

Check if the same lab product or an alternative is used in the 5 most similar protocols
The samples were washed with PBS, fixed with 4 % paraformaldehyde for 30 min, according to experimental requirements, were incubated with anti-Pdpn (proteintech, 1:200), anti-Grem1 (CST, 1:50), anti-Cd200 (proteintech, 1:200), anti-Ctsk (Abcam, 1:200), anti-Ptgs2 (proteintech, 1:200), anti-vinculin (proteintech, 1:200) or anti-YAP (CST, 1:200) at 4 °C for 8–12 h. After that, samples incubated with goat anti-rabbit IgG (Servicebio, Alexa Fluor 488, 1:300), goat anti-rabbit IgG (Servicebio, Cy3, 1:300) or goat anti-mouse IgG (Servicebio, Alexa Fluor 488, 1:200) for 1 h at room temperature. Nuclear staining was conducted with DAPI (Sigma), and F-actin stained by rhodamine phalloidin (Beyotime). Tissue samples were fixed in 4 % paraformaldehyde. After decalcification, all samples were embedded in paraffin and sectioned at 6-μm slices. The tissue sections were immunofluorescently stained with primary antibodies targeting Sry (Santa Cruz, 1:200), CD11b (Servicebio, 1:500), TNF-α (Uscn Life Science Inc., 1:1000), IL-1β (Servicebio, 1:1200) and IL-10 (Servicebio, 1:1000), and the goat anti-rabbit IgG (Servicebio, Alexa Fluor 488, 1:400) and goat anti-rabbit IgG (Servicebio, Cy3, 1:500). DAPI was used to stain the nuclei. The images were observed by a fluorescence microscope (Olympus CKX53) or Nikon confocal microscope (Nikon).
+ Open protocol
+ Expand
7

Protein Extraction and Western Blot Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
The total protein was extracted by protein lysis buffer (BioRad, Hercules, California) according to manufacturer's protocols. And then proteins were resolved via 10 % sodium dodecyl sulfatepolyacrylamide gel electrophoresis (SDS-PAGE) and transferred to nitrocellulose membranes. The membranes were incubated with anti-vinculin (proteintech, 1:5000), anti-phospho-YAP (CST, 1:2000), anti-YAP (CST, 1:2000), anti-COX2/Cyclooxygenase 2/Ptgs2 (proteintech, 1:1000), anti-Lamin b1 (proteintech, 1:2000) and anti-GAPDH (CST, 1:2000) at 4 °C for 8–12 h. After that, the membranes were incubated with horseradish peroxidase (HRP)-conjugated goat anti-rabbit IgG (Servicebio, 1:3000) or HRP-conjugated goat anti-mouse IgG (Servicebio, 1:3000) at room temperature for 1 h.
+ Open protocol
+ Expand
8

Plasmid Construction and Antibody Characterization

Check if the same lab product or an alternative is used in the 5 most similar protocols
The Flag-tagged DTX3-expressing plasmid was purchased from Vigene Biosciences, Inc. (Shandong, China). The Myc-tagged DTX3 plasmid was generated by inserting the full-length cDNA amplified by PCR into the pcDNA3.1/Myc-His vector, using the following primers, 5′-GGAATTCATGTCGTTCGTCCTGTCC-3′ and 5′-CGGGATCCGTCATCTGTGATACCCTTCGC-3’. The plasmids encoding non-tagged mtp53 (R175H, S241F, R248W, and R273H), His-Ub and HA-MDM2 were described previously.23 (link) The anti-Flag (Catalogue No. F1804, Sigma–Aldrich), anti-DTX3 (Catalogue No. ab197360, Abcam, Cambridge, MA, USA), anti-p53 (DO-1, Catalogue No. sc-126, Santa Cruz Biotechnology, Santa Cruz, CA, USA), anti-p53 (Catalogue No. ab179477, Abcam) anti-GAPDH (Catalogue No. 60004-1-Ig, Proteintech, Hubei, China), anti β-actin (Catalog No. 60008-1-Ig, Proteintech), anti-Vinculin (Catalogue No. 66305-1-Ig, Proteintech), and the secondary antibodies for rabbit (Catalogue No. ARG65351, Arigo) and mouse (Catalogue No. ARG65350, Arigo), and the light chain-specific secondary mouse antibody (Catalogue No. 115-035-174, Jackson) were commercially purchased.
+ Open protocol
+ Expand
9

Quantification of GTP-bound RAS in Lung Tumors

Check if the same lab product or an alternative is used in the 5 most similar protocols
30 μg protein extracts from lung tumors isolated in the three experimental groups or CRISPR-modified KPB6 cells were electrophoresed and immunoblotted using the following primary antibodies and dilutions: anti-SOS1 (Cat#610096, 1:500, BD), anti-SOS2 (Cat#sc-15358, 1:500, Santa Cruz Biotechnology), anti-tubulin (Cat#T5293, 1:10,000, Sigma) and anti-vinculin (Cat#26520-1-AP, 1:5000, ProteinTech) and the corresponding secondary antibodies: Goat anti-mouse DyLightTM 800 (Cat#SA5-35521, 1:10,000, ThermoFisher Scientific) and Goat anti-rabbit Fluor® 680 (Cat#A21076, 1:5000, Invitrogen). To determine the levels of the GTP-bound levels of RAS in lung tumors (anti-RAS, Cat# 05-516, 1:1000, Millipore), we performed pull-down assays for active RAS as previously reported27 .
+ Open protocol
+ Expand
10

Western Blot Analysis of ACE2 and TMPRSS2

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cell pellets were resuspended in standard RIPA buffer (cat # R0278, lot # SLBL7395V) on ice for 30 min, collected by centrifugation, and quantified using standard BCA assay. Proteins were resolved by 4–20% gradient PAGE and transferred using semi-dry transfer apparatus (Bio-Rad, Hercules, CA) onto Immobilon-P PVDF membranes (cat # IPVH00010). Membranes were blocked in Pierce Protein-Free T20 (TBS) Blocking Buffer (Thermo Fisher, cat # 37571) and washed using TBS with 0.1% Tween-20. We probed membranes with either polyclonal # AF933 (lot # HOK 0320032; 1:200; R&D Systems, Minneapolis, MN) or polyclonal # 21115-1-ap (1:2000; ProteinTech) anti-ACE2 antibodies. Other antibodies used were anti-TMPRSS2 # 14437-1-AP (1:500; ProteinTech), anti-vinculin # CP74, or anti-β-actin # A5441. Secondary antibodies were HRP-conjugated anti-goat # 305-035-003 (lot # 145804; Jackson ImmunoResearch, West Grove, PA); anti-mouse # NA931V (lot # 9715064, GE Healthcare, Chicago, IL); and anti-rabbit # NA9340V (lot # 10997954, GE Healthcare).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!