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4 protocols using sc 23959

1

Western Blot Analysis of Liver Proteins

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Liver proteins were extracted by RIPA lysis buffer and western blot was performed as previously described.26 The primary antibodies used were the following: rabbit anti‐PGC‐1α (1:1000 dilution, wl02123, Wanlei); rabbit anti‐NRF1 (1:5000 dilution, ab175932, Abcam); rabbit anti‐TFAM (1:1000 dilution, ab252432, Abcam); rabbit anti‐MFN‐1 (1:1000 dilution, abs120025, absin); rabbit anti‐MFN‐2 (1:5000 dilution, ab124773, Abcam); rabbit anti‐OPA‐1 (1:3000 dilution, ab157457, Abcam); mouse anti‐DRP‐1 (1:500 dilution, sc‐271583, Santa Cruz); mouse anti‐Fis‐1 (1:500 dilution, sc‐376447, Santa Cruz); mouse anti‐Bax (1:500 dilution, sc‐23959, Santa Cruz); rabbit‐anti‐Bcl‐2 (1:500 dilution, wl01556, Wanlei) and rabbit anti‐β‐actin (1:5000 dilution, D110001, Sangon Biotech). The nitrocellulose membrane was incubated overnight at 4°C with the above primary antibodies and then incubated with the appropriate horseradish peroxidase (HRP)‐conjugated secondary antibodies at room temperature for 2 h. The bands were visualized using Tannon 5200 (Tanon Science & Technology Co., Ltd.) and quantified by Image J software (National Institutes of Health).
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2

Bax Epitope Exposure Assay

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Exposure of the 6A7 epitope of BAX was assessed by immunoprecipitation with a 6A7-domain-specific antibody purchased from Santa Cruz (SC-23959). Protein G beads (50 µL, Santa Cruz) were washed three times with 3% BSA in PBS and incubated with 15 µL 6A7 antibody at 4 °C for 1 hr. Recombinant full-length BAX (10 µM) was incubated with four equivalents of BIM–BH3 peptide alone and in the presence of five or ten equivalents of EO for 15 min at room temperature. Incubation of full-length recombinant BAX with 0.1% Triton X served as a positive control for exposure of the 6A7 epitope. After incubation, 10 µL of each reaction was transferred to the Protein G beads pre-loaded with anti-6A7 antibody and 1 µL was reserved as a loading control. After 90 min of incubation at 4 °C, beads were collected and washed three times with 500 µL of 3% BSA in PBS and solubilized with 25 µL LDS/DTT loading buffer. Samples were resolved by SDS-PAGE electrophoresis and western blot analysis with a BAX monoclonal antibody (Cell Signaling, Cat. # 2772) 1:1000.
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3

Oxidative Stress Assays in Cell Culture

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All reagents for cell culture, GLP-1-(7 (link)–36 (link)) amide, Hoechst 33258 and apocynin (NADPH oxidase inhibitor) were purchased from Sigma (St. Louis, MO, USA). The Annexin V-FITC/propidium iodide (PI) apoptosis detection kit was purchased from Invitrogen (Carlsbad, CA, USA). The cell counting kit-8 (CCK-8), ROS and superoxide anion assay kits were purchased from the Beyotime Institute of Biotechnology (Jiangsu, China). Rabbit anti-p47phox (SC-14015), rabbit anti-p22phox (SC-20781), β-actin (SC-47778), and primary antibodies against RAGE (SC-5563), p53 (SC-126), Bax (SC-23959) and exendin(9 (link)–39 (link)) (SC-364387), the antagonist for receptor of GLP-1 (GLP-1R), were all purchased from Santa Cruz Biotechnology, Inc. (Delaware, CA, USA). The caspase-3 and caspase-9 activity assay kits were obtained from BD Biosciences (Franklin Lakes, NJ, USA).
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Immunofluorescence Imaging of Mitochondrial

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Sorted cells were seeded onto coverslips, fixed with 4% paraformaldehyde (FB002; Invitrogen), and stained in routine manner. We stained using DAPI, MitoTracker Deep Red FM (0.1 µL/mL, M22426; Invitrogen), rabbit anti-mCherry (1:100, GTX128508; GeneTex), mouse anti-TID1L/S (1:50, sc-18820; Santa Cruz Biotechnology), and anti-BAX-6A7 (1:50, sc-23959; Santa Cruz Biotechnology) with AlexaFluor 405-conjugated anti-mouse, and AlexaFluor 555-conjugated anti-rabbit secondary antibodies. Each 3D image is comprised of a Z-Stack series captured on a Leica SP8 Confocal at 63× magnification and generated utilizing Leica’s LAS X Life Science Microscope Software Platform’s 3D Viewer.
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