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NeuroD is a protein that functions as a transcription factor. It is involved in the regulation of gene expression during neuronal differentiation and development.

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2 protocols using neurod

1

Quantifying Neurogenesis in Dentate Gyrus

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Dissected brains were fixed in 4% paraformaldehyde overnight, following dehydration in 25% sucrose in phosphate-buffered saline (PBS). All sections for immunohistochemistry were sliced at a thickness of 40 µm. Brain sections were mounted on SuperFrost Plus slides (Thermo) and dried overnight. Slides were then incubated in 0.01 M citric acid buffer for 20 min at 95 °C, 3% H2O2 for 10 min, rinsed in PBS, and incubated overnight at room temperature in DCX antibody (1:250, Santa Cruz), Ki67 antibody (1:1,000, Vector Laboratory), Tbr2 antibody (1:1,000, Abcam), and NeuroD (1:1,000, Santa Cruz). Subsequently, we used a standard IgG ABC kit (Vector Laboratory) procedure according to the manufacturer’s instructions and incubated the slides for 5 to 10 min with a Sigma DAB (3,3′-diaminobenzidine) tablet.
For quantification, all slides were randomized and coded before quantitative analysis. Slides (half-brain) were examined under a 20× objective. Labeled cells were counted on every eighth section through the entire rostrocaudal extent of the granule cell layer (six sections per animal). The number of cells counted was then multiplied by 16 to obtain an estimate of the total number of positive cells in the dentate gyrus, as previously described (37 (link)).
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2

Immunohistochemical Quantification of Neurogenesis

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Dissected brains were fixed in 4% paraformaldehyde overnight followed by dehydration in 25% sucrose. Brain sections at a thickness of 40 µm were collected and stored in anti-freeze buffer before staining.
For immunohistochemical staining, brain sections were mounted on SuperFrost Plus slides (Thermo) and air-dried overnight. The slides were incubated with 0.01 M citric acid buffer (pH = 6.4) for 20 min at 95 °C (40 min in the case of KI67), 3% H2O2 for 5 min, and then diluted primary antibody (KI67 1:2500 Abcam; Tbr2 1:1000 Abcam; NeuroD 1:500 Santa Cruz; DCX 1:3000 Abcam) at room temperature overnight; slides were washed with PBS for 15 min (3 times) between each step. Subsequently, we used a standard IgG ABC kit (Vector Lab) according to the manufacturer’s instructions and incubated the slides for 5–10 min with 3,3’-Diaminobenzidine (DAB) tablets (Sigma). Sections were then counterstained with cresyl violet and mounted in a DPX mountant (Sigma).
For quantification, all sections were examined under a microscope with a magnification of 200x. Antibody-stained cells were counted on the dentate gyrus bilaterally every eight sections through the entire extent of the granule cell layer (six sections per animal). The number of cell counts was then multiplied by eight to obtain an estimate of total antibody-stained cells in the dentate gyrus (DG).
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