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73 protocols using mini trans blot system

1

Western Blot Analysis of Claudin-4 in Caco-2 Cells

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Proteins were isolated from Caco-2 cells using RIPA buffer and subsequently subjected to Western blot analysis as described by Dinić et al. (2017) (link). Briefly, the extracted proteins (10 μg) were separated on 12% SDS–PAGE and transferred to 0.2 mm nitrocellulose membrane (GE Healthcare, Chicago, IL, United States) using Bio-Rad Mini trans-blot system (Bio-Rad, Hercules, CA, United States). The membranes were incubated for 2 h with anti-claudin (CLDN-4) antibody (1:1000; Novus Biologicals, United States) and anti-β-actin (1:1000; Thermo Fisher Scientific). The membranes were washed and incubated with appropriate HPR-conjugated secondary antibodies (goat anti-rabbit; 1:10000; Thermo Fisher Scientific) for 1 h at room temperature. Proteins were detected by enhanced chemiluminescence (Immobilon Western, Merck Millipore).
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2

Western Blot Analysis of Tight Junctions

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The RIPA lysate buffer (Beyotime Biotech, Nantong, China) was used to extract total proteins from the brain and the bicinchoninic acid protein assay kit (Beyotime, Shanghai, China) was used to determine the concentrations of proteins. The total proteins were run on SDS-PAGE gels and then blotted onto nitrocellulose membranes (Millipore, Billerica, MA, USA) using the BIO-RAD Mini Trans-Blot® System (Bio-Rad, Louisville, KY, USA). The membranes were incubated with 5% skim milk to reduce nonspecific binding for 1h at room temperature. Then, the membranes were incubated overnight at 4 °C in primary antibodies. The primary antibodies used in this study were ZO-1 (1:1000; Cat#61-7300, Invitrogen), Occludin (1:500; Cat#71-1500, Invitrogen), and Claudin-5 (1:50; Cat#35-2500, Invitrogen) and GAPDH (1:1000; Cat#2118, Cell Signaling Technology). After the membranes were washed four times with TBST, they were incubated with HRP-conjugated secondary antibodies (all at 1:1000 dilution in 5% nonfat milk) at room temperature for 1 h. Then, the membranes were visualized using the enhanced chemiluminescence (ECL) reagent (Millipore, Billerica, MA, USA) and the chemiluminescence imaging system (ChemiScope 5300; Clinx Science Instruments, Shanghai, China). The band intensity was analyzed using a chemiluminescence imaging system (ChemiScope 5300; Clinx Science Instruments, Shanghai, China).
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3

Western Blot Analysis of Paw Tissue

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Protein lysates were obtained from a paw tissue previously pulverized in liquid nitrogen using RIPA buffer and subsequently subjected to Western blot analysis as described by Dinic et al. (2017) (link). Briefly, the extracted proteins (20 μg) were separated on 12% SDS–PAGE and transferred to 0.2 mm nitrocellulose membrane (GE Healthcare) using Bio-Rad Mini trans-blot system (Bio-Rad, Hercules, CA, United States). The membranes were incubated for 2 h with anti-myeloperoxidase (MPO) antibody (1:1000; Abcam) and anti-β-actin (1:1000; Thermo Scientific). The membranes were washed and incubated with appropriate HPR-conjugated secondary antibodies (goat anti-rabbit; 1:10000; Thermo Scientific and goat anti-mouse; 1:10000; Amersham Biosciences, Piscataway, NJ, United States) for 1 h at room temperature. Proteins were detected by enhanced chemiluminescence (Immobilon Western, Merck Millipore). The intensity of the bands was quantified using ImageJ software. The results were normalized to β-actin loading control.
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4

Quantitative Western Blot Analysis of Proteins

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Total proteins from cultured cells were extracted using a Total Protein Extraction Kit (Keygen), according to the manufacturer’s guidelines. Protein concentrations were determined using a BCA Protein Assay Kit (Keygen). Lysates were mixed with the appropriate volume of 5× loading buffer, boiled, and loaded into SDS-PAGE gels for separation. Proteins were transferred to polyvinylidene difluoride (PVDF) membranes using a Mini Trans-Blot™ system (Bio-Rad). The membranes were then blocked with 5% skim milk in TBST, incubated with primary antibodies overnight at 4 °C, and then incubated with HRP-conjugated secondary antibodies for one hour at room temperature. The blots were imaged with Immobilon™ Western Chemiluminescent HRP Substrate (Millipore) and the ChemiDoc™ XRS + imaging system (Bio-Rad). Images were quantified using Bio-Rad Image Lab software. The primary and secondary antibodies used are listed in Supplementary Table 1.
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5

Western Blot Analysis of Protein Expression

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For Western blot analysis, cells were lysed in laemmli buffer (62.5 mM Tris-HCl at pH 6.8, 2% SDS, 10% glycerol, 0.7 M β-mercaptoethanol), followed by boiling for 3 min. Samples were resolved using reducing 10% polyacrylamide Tris-glycine SDS PAGE. Resolved proteins were transferred to a nitrocellulose membrane (GE Healthcare Life Sciences) at 57 V for 60 min (Mini Trans-Blot system, Bio-Rad), washed in Tris-Buffered Saline (TBS) containing 0.1% Tween (TBS-T) and blocked (5% non-fat milk TBS-T) before incubating with primary antibodies diluted in 3% BSA TBS-T overnight at 4°C. For antibodies used see Key Resources Table 1. Membranes were washed with TBS-T and incubated with the appropriate horseradish peroxidase (HRP)-conjugated secondary antibody (GE Healthcare Life Sciences) diluted 1:3,000 in TBS-T containing 5% non-fat milk for 1 h at room temperature. Membranes were then washed in TBS-T and incubated with Pierce ECL Western Blotting Substrate (Thermo Fisher Scientific) before exposure to x-ray film. Densitometry was performed on scanned films using Gel Analyzer in FIJI.
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6

Western Blotting Protocol for Runx2 Quantification

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Cell lysate samples (15 μg of protein) separated on a 4–20% polyacrylamide gel for electrophoresis were transferred onto nitrocellulose membranes using Bio-Rad Mini-Trans-Blot system. The blocked membrane was incubated with primary antibodies for Runx2 overnight at 4°C and with secondary antibody for 1 hour at room temperature. The immunoreactive bands were detected using a BIO-RAD chemiluminescence system, and the bands were captured and intensity quantified by with BIO-RAD ChemiDoc XRS+ camera and Image Lab software respectively. For normalization, the membranes were re-probed after stripping with an anti-GAPDH antibody and quantified.
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7

Western Blot Analysis of Signaling Proteins

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Treated cells were lysed using western lysis buffer for 10 min, followed by centrifugation at 13,000×g for 15 min to precipitate insoluble material. Cytoplasmic and nuclear proteins were extracted according the instructions of cytoplasmic and nuclear protein extraction kit. Protein concentration was measured using a BCA protein kit. 40 µg of cell lysates were separated by 12% SDS-PAGE and transferred to nitrocellulose membranes using a BIO-RAD mini-transblot system. Membranes were blocked for 1 h in Tris-buffered saline (TBS) containing 5% milk and Tween 20, followed by incubation with anti-β-catenin (1∶1000), anti-phospho-GSK3β (Ser9) (1∶1000), anti-phospho-β-catenin (Ser33) (1∶500), anti-Gli1 (1∶500), anti-c-Myc (1∶500), anti-Lamin B1 (1∶500), anti-cyclin D1 (1∶500), anti-PCNA(1∶1000) or anti-α-tubulin (1∶500) overnight at 4°C. Following three washes in TBS, membranes were incubated with secondary antibodies (1∶1000) for 1 h at room temperature and incubated in chemiluminescence detection substrate for 5 min followed by X-ray film exposure.
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8

Quantitative Immunoblotting of Tachyzoite Proteins

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Protein extracts from 107 freshly egressed tachyzoites were prepared in Laemmli sample buffer, separated by SDS-PAGE and transferred onto nitrocellulose membrane using the BioRad Mini-Transblot system according to the manufacturer’s instructions. Rat monoclonal antibody (clone 3F10, Roche) was used to detect HA-tagged proteins. Other primary antibodies used were rabbit anti-lipoic acid antibody (ab58724, Abcam), mouse anti-SAG1 [117 (link)], rabbit anti-CPN60 [118 (link)] and mouse anti-actin [119 (link)]. Protein quantification was performed by band densitometry using FIJI (https://imagej.net/software/fiji/).
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9

Western Blot Protein Detection Protocol

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Cell lysates (10 μg of protein) separated on a 4–20% polyacrylamide gel for electrophoresis were transferred onto nitrocellulose membranes using Bio-Rad Mini-Trans-Blot system. The membranes were blocked with 5% BSA in TBS with Tween-20 (TBST, 0.1% Tween-20) at room temperature. The blocked membrane was incubated with primary antibodies overnight at 4°C and with secondary antibody for 1 hour at RT. The immunoreactive bands were detected using a BIO-RAD chemiluminescence system, and the bands were captured and intensity quantified by with BIO-RAD ChemiDoc XRS+ camera and BIO-RAD Image Lab software respectively.
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10

Western Blot Analysis of Protein Expression

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Tissues were homogenized in Tris-SDS lysis buffer (50 mM Tris-HCl pH 8.0 and 1% SDS) and incubated on ice for 20 min, followed by centrifugation at maximum speed (22,000 g) to get the protein supernatant. All protein samples were mixed 1:4 with 4× loading buffer (10% SDS, 1.5 M dithiothreitol and 0.3 M Tris-HCl pH 6.8) and boiled for 5 min. Proteins were resolved by 10% SDS PAGE and transferred onto a polyvinylidene fluoride (PVDF) membrane (Immobilon, Millipore) using a Mini Trans Blot system (Bio-Rad). The membranes were then blocked in TBST (10 mM Tris-HCl pH 8.0, 150 mM NaCl and 0.5% vol/vol Tween-20) containing 5% skim milk powder at room temperature for 1 h. After that, membranes were incubated with the indicated primary antibody at 4°C overnight. The next day, membranes were washed and then incubated with HRP-conjugated secondary antibody at room temperature for 1 h. Signals were detected by enhanced chemiluminescence (Pierce) according to the manufacturer’s instructions. We generated VGLL4 antibody by ABclonal Biotechnology Co. Ltd. The detail information of antibodies used for western blot were listed in S5 Table.
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