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Bio gen pro200 homogenizer

Manufactured by PRO Scientific
Sourced in United States, Germany

The Bio-Gen PRO200 Homogenizer is a laboratory equipment designed to efficiently blend and mix various biological samples. It utilizes a high-speed motor and a specialized blade system to thoroughly homogenize the sample, ensuring a consistent and well-dispersed mixture.

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40 protocols using bio gen pro200 homogenizer

1

Measuring BCKD Activity in Muscle and Liver

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We measured BCKD activity using a modified version of a previous assay (White et al., 2018 (link)). Approximately 30 mg of frozen gastrocnemius muscle or liver were crushed in liquid nitrogen and homogenized (Bio‐Gen PRO200 Homogenizer, PRO Scientific, Oxford, CT) in 250 μL of ice‐cold buffer 1 (30 mM potassium phosphate buffer (KPI), 3 mM EDTA, 5 mM DTT, 1 mM valine, 3% FBS, 5% Triton X‐100 and 1 μm leupeptin (Sigma Aldrich, #L2884)). The resulting sample was centrifuged (10 min at 10,000 g, 4°C) and 50 μL of the supernatant was added to 300 μL of buffer 2 (50 mM HEPES, 30 mM KPI, 0.4 mM CoA (Sigma Aldrich, #C4282), 3 mM NAD+ (Sigma Aldrich, #N0632), 5% FBS, 2 mM Thiamine (Sigma Aldrich, #T1270), 2 mM magnesium chloride and 7.8 μM [14C] valine (Perkin Elmer, #NEC291EU050UC, Waltham, MA)). This reaction took place in a 1.5‐mL Eppendorf tube containing a raised 2‐M NaOH wick trap. Each Eppendorf tube was sealed tight and placed in a shaking incubator at 37°C for 30 min. The radiolabeled 14CO2 contained in the wick trap was counted in a liquid scintillation counter.
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2

RNA Extraction from Frozen Cervical Tissue

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Frozen cervical tissue immersed in TRIzol reagent was homogenized using a homogenizer (Bio-gen Pro200 Homogenizer, Pro Scientific) in order to lyse the tissue. The RNA extraction was completed using the RNeasy Kit (Quiagen Ltd., Crawley, West Sussex, UK) according to the manufacturer’s instructions. Total RNA concentration was quantified using the Nanodrop ND-1000 UV-Vis Spectophotometer (NanoDrop Technologies Inc., Wilmington, DE, USA). Quality of RNA was ascertained with the use of 2100 Agilent Bioanalyzer (Agilent Technologies, Santa Clara, CA, USA). RNA integrity number (RIN) was greater than 7 in all samples and RNA aliquots were stored at − 80 °C after extraction.
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3

Isolation and Quantification of Mouse Liver RNA

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Mouse liver punches were homogenized using Bio-Gen PRO200 Homogenizer (PRO Scientific) in TRIzol (Thermo Fisher Scientific) or RLT buffer from RNeasy Kit (Qiagen). Total RNA was isolated according to protocols supplied by the manufacturers. TaqMan One-step qRT-PCR was performed using AgPath-ID™ One-Step RT-PCR Reagents (Thermo Fisher Scientific). Expression levels of target RNA were normalized to total RNA quantified using Quant-iT RiboGreen RNA Reagent (Thermo Fisher Scientific). Primer-probe sets for mouse Cdkn1a (Mm01303209_m1), mouse Gadd45a (Mm00432802_m1), mouse Mcl1 (Mm01257351_g1), mouse Bcl-xl (Mm00437783_m1), mouse Map3k6 (Mm00522235_m1), mouse Cd68 (Mm03047343_m1), mouse Lgr5 (Mm00438890_m1), mouse Rhbg (Mm00491234_m1), mouse P54nrb (Mm00834875_g1) and mouse Sfpq (Mm01179807_m1), mouse Pten (Mm00477208_m1 and Mm01212532_m1) were purchased from Thermo Fisher Scientific.
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4

Isolation of Retinal RNA from Mouse Enucleated Eyes

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After anesthesia, enucleation and removal of the anterior segment, the posterior eye cup (including the retina and RPE) was rinsed in 1xPBS. RNA was immediately isolated using the miRNeasy Mini Kit (QIAGEN Cat # 217004). In brief, 1 ml of QIAzol Lysis Reagent (QIAGEN Cat # 79306) was added to individual posterior eye cups in 1.5 ml centrifuge tubes and the samples were homogenized with a Bio-Gen PRO200 Homogenizer (PRO Scientific Inc.). After adding 200 μl of chloroform (Sigma-Aldrich, Cat # C2432), the tubes were shaken by hand for 15 seconds. After 2 minutes, the samples were transferred to a Phaselock Gel tube (5 PRIME, Cat # 2302830) and centrifuged for 15 minutes at 13000 rpm (18500 rcf). The supernatant was transferred to a new tube, and 100% ethanol (1:1 volume) was added. The entire sample was transferred to an RNeasy Mini Spin Column and processed according to the QIAgen protocol. The RNA was eluted with RNase-free water. The RNA quality was checked using an Agilent bio-analyzer and samples with an RNA integrity number (RIN) of above 9 were used for further testing.
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5

Triatomine DNA Extraction and PCR Analysis

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DNA extraction assay was performed using DNEasy Blood and Tissue kit (QIAGEN, Germany), following the manufacturer’s procedure provided in the kit. Briefly on tissue preparation, approximately 25 μg of tissue from the back of the triatomine was cut with a leaf of new scalpel for each sample. The cut portion of the tissue was placed in a 1.5 ml tube with 200 μl of tissue lysis buffer (Buffer ATL, accompanied in the mentioned kit), followed by maceration with a homogenizer (Bio-Gen PRO200 Homogenizer, Pro Scientific, USA).
The PCR was conducted using 121 and 122 primers (121: 5′-AAA TAA TGT ACG GG(T/G) GAG ATG CAT GA-3′, 122: 5′-GGT TCG ATT GGG GTT GGT GTA ATA TA-3′) targeting specifically the kinetoplast minicircle DNA sequences [10 (link), 11 (link)]. Each reaction was performed in a total of 25 μl reaction volume containing 0.5 μmol/L of each primer, 12.5 μl of GoTaq DNA polymerase (Promega, USA), 5 μl of DNA template, and additional distilled water to the final reaction volume. Briefly, the PCR condition was: 3 min at 94 °C for the denaturation, followed by 35 cycles of 30 s at 94 °C, 30 s at 55 °C, and 30 s at 72 °C with a final extension of 10 min at 72 °C. The amplified PCR product was detected at the size of 330 bp in the electrophoresis using 3% of agarose gel.
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6

RNA Extraction from Posterior Eye Tissue

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After anesthesia, enucleation, and removal of the anterior segment, the posterior eye cup was rinsed in 1 × PBS. RNA was immediately isolated using the miRNeasy Mini Kit (Cat # 217004; Qiagen, Hilden, Germany). In brief, 1 ml of QIAzol Lysis Reagent (Cat # 79306; Qiagen) was added to individual posterior eye cups in 1.5 ml centrifuge tubes and the samples were homogenized with a Bio-Gen PRO200 Homogenizer (PRO Scientific, Inc., Oxford, CT, USA). After adding 200 μl of chloroform (Cat # C2432; Sigma-Aldrich Corp., St. Louis, MO, USA), the tubes were shaken by hand for 15 seconds. After 2 minutes, the samples were transferred to a Phaselock Gel tube (Cat # 2302830; 5 PRIME, Hilden, Germany) and centrifuged for 15 minutes at 18,500g. The supernatant was transferred to a new tube, and 100% ethanol (1:1 volume) was added. The entire sample was transferred to an RNeasy Mini Spin Column and processed according to the Qiagen protocol (Cat# 217004; Qiagen). The RNA was eluted with RNase-free water. The RNA quality was checked using an Agilent bioanalyzer and samples with an RNA integrity number (RIN) of above 9 were used for further testing.
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7

Inducing LH Surge in Female Mice

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To induce the LH surge43 (link),67 (link),68 (link), female C57BL/6 mice underwent bilateral ovariectomy. LH surge was induced through one of two paradigms. For most animals, five days after surgery, animals were given a subcutaneous injection of 0.25 ug of β-estradiol benzoate (EB; Sigma-Aldrich) in 100 μl of sesame oil 4 h after lights on. On the following day, animals were given 1.5 μg of EB in sesame oil (100 μl) 4 h after lights on. The following day, animals were euthanized at lights off and pituitaries were snap frozen on dry ice and blood collected and processed to serum. Sera was processed using a Luminex assay and the Millipore MAGPIX as described, and an LH surge was considered a value greater than 1.5 ng/ml. The LH surge in three animals was induced by ovariectomy and E2 pellets as described43 (link). There is no difference in the amplitude of the LH surge between these paradigms43 (link). For this paradigm, LH in serum samples was measured via Luminex or via the University of Virginia Ligand Core, and an LH surge was accepted at a concentration of 0.6 ng/ml. Pituitaries where homogenized (PRO Scientific Bio-Gen PRO200 Homogenizer), then lysed in RIPA/NP-40 lysis buffer. Western blots were performed on pituitary lysates.
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8

Extracting High-Quality RNA from Frozen Cervical Tissue

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As previously described [7 (link)], frozen cervical tissue immersed in TRIzol reagent was homogenized using the homogenizer (Bio-gen Pro200 Homogenizer, Pro Scientific) in order to lyse the tissue. The RNA extraction was completed using the RNeasy Kit (Qiagen Ltd., Crawley, West Sussex, UK) according to the manufacturer’s instructions. Total RNA concentration was quantified using the Nanodrop ND-1000 UV–Vis Spectrophotometer (NanoDrop Technologies Inc., Wilmington, DE, USA). Quality of RNA was ascertained with the use of 2100 Agilent Bioanalyzer (Agilent Technologies, Santa Clara, CA, USA). RNA integrity number was greater than 7 in all samples and RNA aliquots were frozen after extraction.
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9

Virulence Evaluation of P. aeruginosa

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A murine pulmonary infection model was used to evaluate the virulence of P. aeruginosa strains. Briefly, bacterial cells of overnight culture were washed three times and re-suspended in phosphate-buffered saline. Bacterial suspensions were administrated intranasally to each mouse at 20 µl per mouse under anaesthesia (approx. 1 × 106 CFU per mouse). After 24 h, all mice were sacrificed and the lungs were harvested and kept in ice-cold 0.9% NaCl saline. The bacterial cells residing in the lungs were suspended into the 0.9% NaCl saline by homogenization using a Bio-Gen PRO200 Homogenizer (Pro Scientific). CFU was quantified by serial dilution and plating on LB agar.
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10

Membrane Protein Extraction from Frozen Tissues

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Flash-frozen mouse uterine or brain tissue was minced over ice and transferred to ice-cold membrane prep solution (250 mM sucrose, 50 mM MOPS, 2 mM EDTA, 2 mM EGTA, 1 mM PMSF, pH 7.4) containing cOmplete Mini EDTA-free Protease Inhibitor Cocktail (Roche, Indianapolis, IN). Tissue was homogenized with the BioGen PRO200 homogenizer (ProScientific, Oxford CT) at 4 °C. Lysate was centrifuged at 14,000 ×g for 15 min, and supernatants were transferred to ice-cold ultracentrifuge tubes. Samples were centrifuged at 100,000 ×g for one hour. Pellets were resuspended in 1% Triton lysis buffer (150 mM NaCl, 10 mM Tris, 1% Triton X-100, pH 8.0) and rotated for two hours or overnight (no noticeable difference) at 4 °C. Non-solubilized protein was removed via centrifugation at 9000 ×g for 20 min at 4 °C.
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