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16 protocols using succinate assay kit

1

Macrophage Metabolite Quantification

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Succinate or triglyceride levels in macrophages were determined using Succinate Assay Kit or Triglyceride Assay Kit (Abcam).
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2

Metabolic Modulation of Activated CD4 T Cells

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10e6 cells WT CD4 T cells were activated under Th1 culture conditions. After 4 days, cells were replated into fresh media and cultured with either DMSO, 10 mM dimethyl malonate, 1 mM 3-nitropropionic acid, 100 μM thenoyltrifluoroacetone, or 1 μM atpenin A5 for 6 hours. Cells were then harvested, processed, and analyzed using the Succinate Assay Kit (Abcam) according to the manufacturer’s protocol.
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3

Quantifying Intestinal Succinate Levels

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Succinate levels in intestinal tissue from non-IBD and IBD patients or WT and SUCNR1−/− grafts were quantified with the Succinate Assay Kit (ab204718, Abcam) according to the manufacturer’s instructions. Briefly, frozen tissues were homogenated with Ultraturrax in the Succinate Assay Buffer, the homogenates were centrifuged, and the supernatants were filtered with 10 kDa spin columns (ab93349, Abcam). Samples were then incubated with the Reaction Mix in 96-well plates during 30 min at 37 °C, and the absorbance at 450 nm was measured with the microplate reader SpectraMax Plus 384 (Molecular Devices). Concentration of succinate was calculated from the standard curve.
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4

Succinate Quantification in Cells

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Succinate concentrations in cells were determined using the Succinate Assay Kit, purchased from Abcam.
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5

Succinate Dehydrogenase Activity Assay

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Extracts and assay were performed using a commercial succinate assay kit (Abcam, Cambridge, UK), with minor modifications. The confluent wells of 6-well plates were rinsed in ice-cold PBS and resuspended in 100 μL of ice-cold SDH Assay Buffer (provided), both pre-equilibrated to the adequate O2 levels (21%, 10%, 5% or 1% O2). Cells were scrapped from wells using cell lifters, then transferred to pre-cooled microfuge tubes and homogenized by pipetting. Clear extracts were used for assay, and the conversion of substrate (DCIP, provided) was assessed by following changes in absorbance at 600 nm over time. Measurements in kinetic mode were taken continuously for 30 min, and a linear range was selected to calculate the changes of absorbance over time (DOD/DT). DOD was converted to nmol of DCIP following the subtraction of background and against a standard curve. Results were normalized to amount of protein used per well, quantified by BCA.
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6

Quantification of Succinate Levels

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HT29 cells supernatant was used to quantify the succinate levels using the Succinate Assay Kit (Abcam, Cambridge, UK) according to the manufacturer’s instructions. Briefly, supernatants were filtered with 10 kDa spin columns (ab93349, Abcam). The Reaction Mix from the kit was used to incubate samples in 96-well plates at 37 °C during 30 min. Finally, the absorbance at 450 nm was measured with the microplate reader SpectraMax Plus 384 (Molecular Devices, San Jose, CA, USA) and the succinate concentration was calculated using the standard curve.
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7

Quantifying Succinate Levels in Macrophages

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Succinate levels in macrophages were quantified using a colorimetric Succinate Assay Kit (Abcam) according to the manufacturer’s protocol. WT or 4-1BBL-deficient macrophages were stimulated with PBS, LPS + IFN-γ, or IMQ for 6 or 12 h, and cell lysates were prepared to determine the intracellular succinate levels.
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8

Succinate Assay of Isolated IECs

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Isolated IECs were collected, processed and analysed using the Succinate Assay Kit (#ab204718, Abcam) according to the manufacturer’s protocol.
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9

Mitochondrial Metabolism Assessment

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Mitochondria were isolated by using the Mitochondria Isolation kit (#89874, Thermo, MA, USA) according to the manufacturer’s instructions. For hexokinase activity detection, mitochondria were isolated from cells and pellet was lysed and subjected to Hexokinase activity measurement by using Hexokinase Colorimetric assay kit (#K789-100, Biovision, CA, USA). G6PD activity measurement by using G6PD activity assay kit (#MAK015, Sigma-Aldrich, MO, USA). NADPH level performed using NADPH quantification kit (#V9510, Promega, WI, USA). NAD+/NADPH level were performed using NADP/NADPH quantification kit (#G9081, Promega, WI, USA). Sccinate levels were measured using a Succinate Assay Kit (#b204718, Abcam) and lactate Colorimetric/Fluorometric Assay kit (#K607-100, Biovision) according to the manufacturer’s protocol.
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10

Comprehensive Metabolite Profiling for Tissues

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For glutamine measurement from tissues or tumours, 20–40 mg of frozen/fresh tissue was homogenized in ice-cold 70% ethanol by Precellys 24 homogenizer, and the supernatant was collected and dried using a SpeedVac Vacuum Concentrator. The pellet was collected and suspended in water (1 μL water per mg of fresh tissue). The concentration of glutamine in the solution was then determined by the EnzyChrom Glutamine Assay Kit (BioAssay Systems) according to the manufacturer’s protocol. For aKG measurement, Alpha Ketoglutarate Assay Kit (Abcam) was used according to the manufacturer’s protocol for colorimetric assay without the deproteinization step. Intracellular succinate was measured using Succinate assay kit (Abcam) and ROS levels were detected using Cellular ROS Assay Red Kit (Abcam, 186027). For ALT and AST measurement in mouse serum, EnzyChrom™ Alanine Transaminase Assay Kit and EnzyChromTM Aspartate Transaminase Assay Kit from Bioassays were used according to the manufacturer’s protocol.
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