The largest database of trusted experimental protocols

Anti sumo1

Manufactured by Cell Signaling Technology
Sourced in United States

Anti-SUMO1 is a laboratory product that can be used to detect and study the Small Ubiquitin-like Modifier 1 (SUMO1) protein. SUMO1 is a post-translational modification involved in various cellular processes. The Anti-SUMO1 product provides a tool to investigate SUMO1 and its role in biological systems.

Automatically generated - may contain errors

16 protocols using anti sumo1

1

Protein Regulation and Circadian Rhythms

Check if the same lab product or an alternative is used in the 5 most similar protocols
Aβ, Dexamethasone (Dex), MG-132, Cycloheximide (CHX), and L-685,458 were purchased from the American Peptide Company (Sunnyvale, CA), Sigma-Aldrich (St. Louis, MO), and Calbiochem (La Jolla, CA). The following antibodies were used for immunodetection: anti-BMAL1, anti-CBP (Santa Cruz Biotechnology Inc., Santa Cruz, CA), anti-PER2 (Alpha Diagnostic International Inc., San Antonio, TX), anti-Sumo1 (Cell Signaling, Beverly, MA), anti-N-Cadherin (BD Biosciences, San Jose, CA), anti-Lamin A (Abcam, Cambridge, MA), and anti-α-Tubulin (Sigma-Aldrich, St Louis, MO).
+ Open protocol
+ Expand
2

Lysis Conditions for Preserving Ubiquitin Conjugations

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells were washed with PBS and then lysed with either the lysis buffer (#9803; Cell Signaling Technology; 20 mM Tris-HCl, pH 7.5, 150 mM NaCl, 1mM Na2EDTA, 1 mM EGTA, 1% Triton, 2.5 mM sodium pyrophosphate, 1mM β-glycerophosphate, 1mM Na3VO4, 1 μg/mL leupeptin) or the acidic lysis buffer (50 mM HEPES, pH 6.0, 150 mM NaCl, 0.1% (w/v) SDS) supplemented with protease cocktail (Roche). The acidic lysis buffer was used to preserve the ubiquitin or ubiquitin-like conjugations (e.g., UBA3N8, Ubc12N8, UbcH7Ub, Ubc9SUMO) that are labile in the regular lysis buffer. The supernatant of the lysate was used for Western blotting. The antibodies used in this study include anti-cullin1 (H213; Santa cruz), anti-UBA3 (F-10; Santa cruz), anti-GlyRS (B01P; Abnova or sc-98614; Santa cruz), anti-SerRS (homemade), anti-V5 (R96-CUS; Invitrogen), and anti-Ube2F (pa5-26641; Thermo Fisher). Other antibodies including anti-NEDD8 (#2754), anti-Ubiquitin (#3936), anti-SUMO1 (#4930), anti-Ubc12 (#5641), anti-Ubc9 (#4918), anti-Flag (#2908), anti-UBA1(#4891), anti-UbcH7 (#3848), anti-UBA2 (#8688), anti-APPBP1 (#14321), anti-p27kip (#3698), and anti-α-Tubulin (#3873) are from Cell Signaling.
+ Open protocol
+ Expand
3

Analyzing Protein Expression in Cellular Compartments

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cytoplasmic and nuclear fractions were separated by using a Qproteome cell compartment kit (Qiagen). Standard Western blot assays were used to analyze protein expression in cells. The following antibodies were used for assays: anti-p53 (1:2000 dilution; Santa Cruz Biotechnology, FL393), anti-Flag (1:40,000 dilution; Sigma, F7425), anti-Rac1 (1:4000 dilution; Millipore, 05-389), anti-HA (1:2000 dilution; Roche, 12013819001), anti-Myc (1:2000 dilution; Santa Cruz Biotechnology, SC-40 HRP), anti-SENP1 (1:2000 dilution; Cell Signaling Technology, 11929), anti-α-tubulin (1:2000 dilution; Santa Cruz Biotechnology, sc8035), anti-Histone H3 (1:1000 dilution; Cell Signaling Technology, 9715), anti-SUMO-1 (1:2000 dilution; Cell Signaling Technology, 4930), anti-p-PAK1/2 (1:1000 dilution; Cell Signaling Technology, 2606), anti-PAK1 (1:2000 dilution; Cell Signaling Technology, 2602), and anti-PAK2 (1:2000 dilution; Cell Signaling Technology, 2615).
+ Open protocol
+ Expand
4

Lysis Conditions for Preserving Ubiquitin Conjugations

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells were washed with PBS and then lysed with either the lysis buffer (#9803; Cell Signaling Technology; 20 mM Tris-HCl, pH 7.5, 150 mM NaCl, 1mM Na2EDTA, 1 mM EGTA, 1% Triton, 2.5 mM sodium pyrophosphate, 1mM β-glycerophosphate, 1mM Na3VO4, 1 μg/mL leupeptin) or the acidic lysis buffer (50 mM HEPES, pH 6.0, 150 mM NaCl, 0.1% (w/v) SDS) supplemented with protease cocktail (Roche). The acidic lysis buffer was used to preserve the ubiquitin or ubiquitin-like conjugations (e.g., UBA3N8, Ubc12N8, UbcH7Ub, Ubc9SUMO) that are labile in the regular lysis buffer. The supernatant of the lysate was used for Western blotting. The antibodies used in this study include anti-cullin1 (H213; Santa cruz), anti-UBA3 (F-10; Santa cruz), anti-GlyRS (B01P; Abnova or sc-98614; Santa cruz), anti-SerRS (homemade), anti-V5 (R96-CUS; Invitrogen), and anti-Ube2F (pa5-26641; Thermo Fisher). Other antibodies including anti-NEDD8 (#2754), anti-Ubiquitin (#3936), anti-SUMO1 (#4930), anti-Ubc12 (#5641), anti-Ubc9 (#4918), anti-Flag (#2908), anti-UBA1(#4891), anti-UbcH7 (#3848), anti-UBA2 (#8688), anti-APPBP1 (#14321), anti-p27kip (#3698), and anti-α-Tubulin (#3873) are from Cell Signaling.
+ Open protocol
+ Expand
5

Immunofluorescent Detection of SUMO-1 and α-Synuclein

Check if the same lab product or an alternative is used in the 5 most similar protocols
All samples were prepared using phosphate-buffered saline (PBS) supplemented with 10% goat serum and 0.1% Triton X-100. Next, the samples were incubated with blocking buffer (5% BSA in TBST, 1 TBS + 0.1% TWEEN 20 buffer) for 45 min at room temperature and then with anti-SUMO-1 (#4930, 1:100 dilution, Cell Signaling Technology, Boston, MA, USA) and anti-α-syn (#2628, 1:100 dilution, Cell Signaling Technology) primary antibodies, at 4°C overnight. After washed with PBS, the samples were incubated with secondary antibody [goat anti-rabbit IgG/fluorescein isothiocyanate (FITC) antibody (bs-0295G-FITC, 1:100 dilution, Bioss, Beijing, China)] for 1 h at room temperature. VECTASHIELD Antifade Mounting Medium with DAPI (H-1200, VECTOR, Burlingame, CA, USA) was used for nuclear labeling. Photomicrographs were captured using a fluorescence microscopy (A1+/A1R+, Nikon, Tokyo, Japan). All digital images were processed using the same settings to improve the contrast.
+ Open protocol
+ Expand
6

Western Blotting and Immunofluorescence Antibodies

Check if the same lab product or an alternative is used in the 5 most similar protocols
The following commercially available antibodies were used for Western blotting: mouse monoclonal antibodies against clathrin heavy chain (CHC; BD Biosciences; 610500), lamin A/C (Santa Cruz Biotechnology; sc-7292), Hsp90 (Santa Cruz Biotechnology; sc-13119), EHD2 (Santa Cruz Biotechnology; sc-100724), dynamin (BD Biosciences; 610245), and filamin A (Chemicon; MAB1678); rabbit polyclonal antibodies against SUMO2/3 (Cell Signaling Technology; 4971), Cav1 (BD Biosciences; 610059), pacsin2 (Abgent; AP8088b); and cavin1 (Sigma; AV36965); for immunofluorescence, mouse monoclonal anti-cavin1 (BD Biosciences; 611258), goat polyclonal anti-EHD2 (Abcam; Ab23935), rabbit polyclonal anti-Cav1 (BD Biosciences; 610059), mouse monoclonal anti-lamin A/C (Santa Cruz Biotechnology; sc-7292), rabbit polyclonal anti-SUMO1 (Cell Signaling Technology; 4930), and rabbit polyclonal anti-SUMO2/3 (Cell Signaling Technology; 4971). Antibodies conjugated to Alexa Fluor 488, Cy3, Cy5, or HRP (Beckman Coulter and Invitrogen) were used as secondary antibodies. HaloTag dye JF635 was provided by L. Lavis (Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA). Accutase was purchased from Sigma-Aldrich. Hepes, SDS, and Tris were purchased from Euromedex.
+ Open protocol
+ Expand
7

Quantitative Western Blot Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Western blot (WB) and immunoprecipitation (IP)/immunoblotting analyses were performed on whole cell lysates and nuclear fractions according to published methods [19 (link),20 (link)]. The anti-phospho-c-Abl (Tyr245), anti-β-catenin, anti-14-3-3 (pan), anti-phospho-14-3-3 (Ser186) and anti-Sumo 1 antibodies were purchased from Cell Signaling Technology. The anti-phospho-JNK (Thr 183) was purchased from Merck Millipore. The anti-CBY1 was previously described [16 (link)]. The anti-β-actin antibody used as loading control was purchased from Santa Cruz Biotechnology. The anti-histone H1 used as control for nuclear protein loading was purchased from Genetex. Signal intensities in single blots obtained in three separate experiments were measured by means of ChemiDoc-It instrument (UVP) equipped with a dedicated software (Launch VisionWorksLS from Euroclone). The differences among signal intensities were evaluated for statistical significance using the paired Student’s t-test.
+ Open protocol
+ Expand
8

Comprehensive Immunofluorescence Antibody Panel

Check if the same lab product or an alternative is used in the 5 most similar protocols
The following primary antibodies were used:
Mouse Mab anti-mouse PML (mAb3739; Millipore), anti-human PML (clone 5E10; Roel van Driel or clone PG-M3; Santa Cruz), anti-SUMO-1 (clone 5B12; MBL), anti-SUMO-2/3 (clone 1E7; MBL), anti-NF160 (Invitrogen), anti-ßIII tubulin (MAB1637; Millipore), anti-ICP0 (Mab11060), anti-ICP4 (clone 10F1; Virusys), anti-ICP27 (Virusys); rabbit Mab anti-SUMO-1 (clone Y299; Abcam), anti-SUMO-2/3 (Mab4971; Cell Signaling): rabbit polyclonal anti-ATRX (H-300; Santa Cruz Biotechnology), anti-Daxx (M-112; Santa Cruz Biotechnology), anti-NF200 (Pierce), anti-SUMO-1 (4930; Cell Signaling), anti-SUMO-2/3 (ab3742; Abcam), anti-ICP0 (Rab190), anti-VP16 (ab4808; Abcam), and anti-pan-HSV-1 (LSBio) were used. All secondary antibodies were Alexa Fluor-conjugated and were raised in goats (Invitrogen).
+ Open protocol
+ Expand
9

Western Blot Protein Analysis Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells were lysed in RIPA lysis buffer and the protein concentration of the cell lysates determined by BCA Protein Assay (Thermo Scientific, 23227). Equal amounts of protein were loaded onto SDS-PAGE gel and transferred to PVDF membranes. Western blotting was performed using primary antibodies and secondary antibodies conjugated with HRP. For immunoblotting, the following antibodies were used: anti-SENP2 (Abcam, ab58418, 1:1000), anti-HIF-1α (Cell Signaling Technology, 79233, 1:1000), anti-phospho-threonine (Cell Signaling Technology, 9386, 1:1000), anti-Ubc9 (Cell Signaling Technology, 4786, 1:1000), anti-BrdU (Cell Signaling Technology, 5292, 1:1000), anti-ubiquitin (Cell Signaling Technology, 3936, 1:1000), anti-cleaved-caspase 3 (Cell Signaling Technology, 9661, 1:1000), anti-SUMO1 (Cell Signaling Technology, 4930, 1:1000), anti-SUMO2/3 (Cell Signaling Technology, 4971, 1:1000), anti-SENP1 (Cell Signaling Technology, 11929, 1:1000), anti-SENP3 (Cell Signaling Technology, 5591, 1:1000), anti-HA-Tag (Cell Signaling Technology, 3724, 1:2000), anti-Flag-Tag (Cell Signaling Technology, 14793, 1:2000), anti-hexokinase 1 (Proteintech, 19662-1-AP, 1:1000), anti-hexokinase 2 (Proteintech, 22029-1-AP, 1:1000), anti-VDAC1 (Proteintech, 10866-1-AP, 1:1000), anti-alpha tubulin (Proteintech, 66031-1-Ig, 1:5000), anti-GAPDH (Proteintech, 10494-1-AP, 1:5000).
+ Open protocol
+ Expand
10

Molecular Profiling of Protein Complexes

Check if the same lab product or an alternative is used in the 5 most similar protocols
Whole mouse brain or transfected cells were extracted and subsequently homogenized on ice in RIPA lysis buffer with protease inhibitors (TargetMol). Total protein levels were quantified using the BCA assay (Pierce). Equal protein amounts were separated by electrophoresis and transferred to PVDF membranes by electroblotting. Membranes were blocked with 5% nonfat dried milk, incubated overnight with primary antibodies, including anti-UBC9 and anti-SENP2 (Santa Cruz), anti-SUMO1 (Cell Signaling Technology), anti-SUMO2 and anti-CaM (Abcam), and anti-Kv7.2 and anti-Kv7.3 (Alomone Labs) antibodies. The membrane was washed and incubated with the secondary antibody coupled to peroxidase, and protein levels were detected with the chemo-luminescence system (Tanon). For immunoprecipitation experiments, the brain or cell lysate was incubated overnight with antibodies. All incubations were performed at 4 °C with constant agitation. Antibody-bound protein complexes were captured by the addition of protein A/G agarose and incubated for another 2 h. Protein A/G agarose was pelleted by centrifugation, and the immunoprecipitated protein complex was eluted using SDS-PAGE sample buffer and Western blotting with antibodies.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!