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16 protocols using goat anti mouse igg hrp

1

Western Blot Analysis for Cellular Proteins

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The cell total protein was isolated using RIPA (Applygen Technologies Inc., Beijing, China), and protease inhibitor (CWBIO, Shanghai, China) was added into the RIPA at a ratio of 1:100. After adding RIPA to the cell culture plate, we collected the cells, then followed this by centrifuging (12,000 rpm) at 4 °C for 10 min. Protein concentrations were measured using the Thermo Scientific Pierce BCA protein assay kit (Thermo Fisher, USA), and 1/4 volume of 5× loading buffer was added to the supernatant. A total of 20 µL of protein was blotted using 10% SDS-polyacrylamide gel, and transferred to a polyethylene difluoride (PVDF) membrane (CST, Boston, MA, USA). After blocking with 5% defatted milk for 2 h, membranes were incubated with antibodies (1:1000) against Gli1 (BOSTER, Wuhan, China), Gli2 (Wanleibio, Shenyang, China), Gli3 (Wanleibio, China), PGC1α (Abcam, Cambridge, MA, USA), PPARγ (Abcam, USA), UCP1 (Abcam, USA), aP2 (Abcam, USA), Cox7a (Abcam, USA), and β-tubulin (Abcam, USA) overnight at 4 °C. The membrane HRP goat anti-mouse IgG, goat anti-rabbit IgG, or rabbit anti-goat IgG secondary antibodies (BOSTER, China) were diluted 1:3000 and incubated for 1 h. Detection was performed using chemiluminescence western blotting substrate (Santa Cruz, CA, USA), with lmage Lab analysis software (Image Lab™, Bio-Rad, Berkeley, CA, USA).
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2

Molecular Profiling of Myo1b Signaling

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After H/R irritation and/or OE-Myo1b (or si-Myo1b) transfection, total proteins of H9c2 cells were detached using RIPA Lysis Buffer (Beyotime Biotechnology). BCA assay (Beyotime Biotechnology) was performed to measure protein concentration. Then, proteins in equal concentration were electrophoresed on polyacrylamide gels and transferred onto polyvinylidene fluoride (PVDF) membrane, which were incubated with anti-Myo1b antibody (ab194356, 1 : 1000, 60 min), anti-Bcl-2 antibody (ab196495, 1 : 1000, 40 min), anti-Bax antibody (ab32503, 1 : 1000, 40 min), anti-LC3B antibody (ab63817, 1 : 500, 40 min), anti-p62 antibody (ab91526, 1 : 1000, 60 min), anti-GAPDH antibody (ab8245, 1 : 10000, 40 min, Abcam Biotechnology, CA, USA), or anti-cleaved-caspase 3 antibody (#9661, 1 : 1000, 60 min, Cell Signaling Technology, MA, USA). Then, PVDF membranes were incubated with HRP goat anti-mouse IgG (BA1051, 1 : 10000) or HRP goat anti-rabbit IgG (BA1054, 1 : 10000, Boster Biological Technology, Wuhan, China) for 60 min. Results were visualized via enhanced chemiluminescence technique. Intensities of proteins were analyzed via the Image-Pro Plus 6.0 software.
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3

Western Blot Analysis of EMT Markers

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Cell samples were lysed in RIPA buffer (Beyotime, Co., Ltd., People’s Republic of China) to obtain total cell lysates. Protein concentrations were determined using the bicinchoninic acid (BCA) protein assay kit (Thermo Fisher Scientific, Co., Ltd., U.S.A.). Protein (40 μg) from each sample was taken out to perform SDS/PAGE, and then transferred to PVDF membranes (Merck Millipore, Darmstadt, Germany) and further incubated with primary polycloncal antibodies: LHFPL3 (1:5000), E-cadherin (1:1000), N-cadherin (1:1500), vimentin (1:1000), snail (1:2000), followed by incubation with horseradish peroxidase conjugated monoclonal HRP goat anti-rabbit (BOSTER, No.BA1054, 1:20,000) and HRP Goat anti-Mouse IgG (BOSTER, No.BA1051,1:20,000) antibodies. The membranes were stripped and reprobed with a primary monoclonal mouse anti-rabbit antibody against GAPDH (1:1000 dillution; Bioworld, Nanjing, People’s Republic of China). GAPDH expression was used as a standard for the normalization of the measurement.
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4

Anticancer Potential of Mangrove Endophyte

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Sdy-1 was isolated from the R. mucronata endophytic Pestalotiopsis sp. HQD-6, which is a typical mangrove plant as described previously [28 (link)]. 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT) was purchased from Sigma-Aldrich, St. Louis, Missouri, USA. Giemsa dye solution was obtained from Biosharp (Wuhan, China). Minimum Eagle’s Medium (MEM) was obtained from Real Times Biotechnology Co. Ltd. (Beijing, China). Total RNA Extraction Reagent, HiScript 1st Strand cDNA Synthesis Kit, 2 × tap Master Mix and Annexin V-FITC/PI Apoptosis Detection Kit were purchased from Vazyme (NanJing, China). Antibodies against Caspase-3, cleaved Caspase-3, Caspase-9, cleaved Caspase-9, β-catenin, p-β-catenin, c-myc, CDK4, Cyclin D1, β-actin, HRP goat anti-mouse IgG and Cy3 goat anti-rabbit IgG were purchased from Boster Biological Technology Co. Ltd. (Wuhan, China). Hoechst33258 staining kit was purchased from Biyuntian Biotechnology Co., Ltd. (Shanghai, China). Propidium Iodide (PI) was from Biofroxx (Duisburg, Germany). The reporter plasmids Top Flash, Fop Flash, pRL-TK were from Miaoling Biological Technology Co., Ltd. (Wuhan, China). Other chemical reagents were purchased from Guangzhou chemical reagent factory (Guangzhou, China).
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5

Protein Extraction and Western Blot Analysis

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Total protein was extracted from myoblasts using RIPA buffer (Beyotime Biotechnology, P0013B) and protease inhibitor mix (AbMole BioScience, M7528) after washing the cells with PBS three times. All the extraction processes were performed according to standard protocols. Twenty micrograms of protein was electrophoresed on 10% SDS polyacrylamide gels, and the protein was transferred to polyvinylidene fluoride membranes (Millipore, IPVH00010), Then, the membranes were blocked with 5% BSA at 4 °C for 2 h and incubated with antibodies (1:1000) against cyclin E (Santa, sc-377,100), cyclin D (Abways, CY5404), p27 (Santa, sc-1641), p21 (Abways, CY5088), CDK4 (Abways, CY5827), PCNA (Abways, CY1245), MyHC (R&D Systems, MAB4470), MyoG (Novus Biologiacals, NB100-56510), MyoD (Novus Biologiacals, NBP1-54153), Appl1 (Abways, CY8185), p38α MAPK (Abways, CY5262), Phospho-p38α MAPK (Abways, CY6390), β-Tubulin (Abways, AB0039), and GAPDH (Abways, AB0036) at 4 ℃ overnight. After being washed with Tris buffered saline with Tween (TBST), the membranes were incubated with HRP goat anti-mouse IgG or goat anti-rabbit IgG secondary antibodies (BOSTER, China).
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6

Western Blot Analysis of B7-H6 and c-Myc

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Cells were washed twice with ice‐cold PBS and then lysed in RIPA Lysis Buffer (Beyotime, Shanghai, China) supplemented with 0.25 mg/mL PMSF (Sigma Aldrich, St. Louis, MO, USA) and 1× protease inhibitor (Roche, Basel, Switzerland). An equal volume of 2 sample loading buffer (62.5 mmol/L Tris‐HCl, 25% glycerol, 2% SDS, 0.02% bromphenol blue, 5% β‐mercaptoethanol, pH 6.8) was added, and cleared extracts were frozen at ‐80°C. Protein concentration was determined using the BCA method. Equal amounts of protein (100 μg) were denatured in 95°C water bath for 5 min, electrophoresed with 4‐20% SurePAGE (GenScript, Nanjing, Jiangsu, China) in 1× MOPS (Sangon, Shanghai, China), and blotted to PVDF membrane (Millipore, ISEQ00010, USA). Anti‐B7‐H6#3 (1:2000) and c‐Myc (1:1000; AF6513, Beyotime, Shanghai, China) antibodies were used as primary antibodies respectively. For chemiluminescence, secondary antibodies HRP‐goat‐anti‐mouse IgG (1:5000; Boster Bio, Pleasanton, CA, USA) and HRP‐goat‐anti‐rabbit IgG (1:5000; Boster Bio, Pleasanton, CA, USA) were applied respectively, and ECL substrate (Bio‐Rad, Hercules, CA, USA) was used for detection.
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7

Comprehensive Protein Expression Analysis

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Anti-FAM63B (1:500; ThermoFisher, # 62318), Anti-ACTN4 (1:5,000; Proteintech, #66628), Anti-GHPDH (1:1,000; Proteintech, #60004), anti-E-calmodulin (1:1,000; Proteintech, #20874), anti-N-calmodulin (1:1000; Proteintech, #22018), anti-wavoprotein (1:1,000; Proteintech, #10366), anti-snail (1:1000; Proteintech, #13099), anti-cyclin D1 (1:1,000; Cell Signaling Technology [CST], #55506), anti-cyclin E1 (1:1,000; CST, #4136), anti-CDK 2 (1:1,000; CST, #2561), anti-CDK4 (1:1,000; CST, #12790), anti-AKT (1:1,000; CST, #4691), anti-p-AKT (1:2,000; CST, #4060), anti-PI3K (1:1,000; CST, #4249), anti-p-PI3K (1:1,000; CST, #17366), anti-mTOR (1:1,000; CST, #2972), anti-p-mTOR (1: 1000; CST, #2971), HRP-goat anti-rabbit IgG (Boster, #BA1055), HRP-goat anti-mouse IgG (Boster, #BA1050), Anti-PCNA (1:1,000; Proteintech, # 10205), Anti-Ki67 (1:1,000; Proteintech, #28074), HA-Ubiquitin plasmid (Sangon Biotech, China), CHX (Melun Biologics, China), MG132 (MCE, USA), MINDY2 small interfering RNA (RiboBio, China), protease inhibitor (Boster Biological Technology, China), and enhanced chemiluminescence reagent (Proteintech, #7003).
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8

Cloning and Purification of MeSAUR1

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The full-length coding sequence of MeSAUR1 was amplified with V2 primer pair (Table 1). The PCR product was ligated into the pCold Pros2 vector (TaKaRa, JPN) at the site of Nde I/Sal I, generating pCold Pros2-MeSAUR1. pCold Pros2-MeSAUR1 was introduced into Escherichia coli strain BL21 (DE3) for protein expression. E. coli cells containing pCold Pros2-MeSAUR1 were cultured in LB medium supplied with 100 mg/L Ampicillin at 37°C. When the OD600 of the culture reaches 0.4–0.8, quickly cool the culture to 15°C in ice water, and then 1.0 mM isopropyl β-D-1-thiogalactopyranoside (IPTG) was added and the cultures were incubated at 15°C, 120 rpm for 24 h. The cells were collected and resuspended in the BugBuster® Protein Extraction Reagent (Novagen, GER) and incubated at 30°C for 1 h. The supernatant was collected and purified with Ni-Charged MagBeads (GenScript, United States). pCold Pros2 was expressed and purified as a control in accordance with the above methods. The purified protein was verified by SDS-PAGE and Western Blotting (Sambrook and Russell, 2001 ). Tag Anti-ProS2 (Takara, JPN) and Goat Anti-Mouse IgG/HRP (Boster, United States) were the primary and secondary antibodies used in Western Blot, respectively.
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9

DNA-Protein Interaction ELISA Protocol

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DNA-protein-interaction enzyme-linked immunosorbent assay was according to the method described by Brand et al. (2010) (link). The MeAGPS1a promoter biotinylated probe was obtained by PCR with Biotin-MeAGPS1a primer pair (Table 1). Tag Anti-ProS2 (TaKaRa, JPN) and Goat Anti-Mouse IgG/HRP (Boster, United States) were the primary and secondary antibodies used in DPI-ELISA.
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10

DNA Protein Interaction ELISA Protocol

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DPI-ELISA was carried out according to the method described by Brand et al. [19 (link)]. The biotinylated MeAGPS1a promoter probe was obtained by PCR, with Biotin-MeAGPS1a primer pairs and KU50 genomic DNA as template (forward: 5′-Biotin-CAGCTGCCCCTACCGTTAA-3′ and reverse: 5′-Biotin-TAGCAAGTTCAGATTTGGAAAAAACC-3′). The ELISA micro-well plates used Pierce® Streptavidin High Capacity Coated Plates (Thermo Fisher Scientific, Rockford, IL, USA). Tag Anti-ProS2 (TaKaRa, Tokyo, Japan) and Goat Anti-Mouse IgG/HRP (Boster, Wuhan, China) were used as the primary and secondary antibodies in the DPI-ELISA.
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