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12 protocols using fluorchem fc system

1

Western Blot Analysis of Antioxidant Proteins

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An amount of 20 μg protein was loaded into each well. Then, cellular proteins were separated by sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) and then transferred to polyvinylidene fluoride (PVDF) membranes (Millipore, Billerica, MA, USA). After being blocked in 5% nonfat dry milk for 2 h, the membranes were incubated with primary antibodies against AC-SOD2 (Abcam, Cambridge, UK), SOD2 (Abcam, Cambridge, UK), and SIRT3 (Abcam, Cambridge, UK), at 4 °C, overnight. All primary antibodies were diluted at 1:1000. Glyceraldehyde 3-phosphate dehydrogenase (GAPDH) (1:3000; Abcam, Cambridge, UK) was used as a control. After the membranes were washed three times, they were incubated with HRP-conjugated anti-rabbit immunoglobulin (Ig)G secondary antibodies (1:3000, Boster, Wuhan, China) for 1 h, at 37 °C. Using an ECL detection system (Millipore, Burlington, MA, USA), the intensity of protein expression on the membrane was measured on a FluorChem FC system (Alpha Innotech, San Jose, CA, USA). The results were analyzed by ImageJ software and normalized against GAPDH.
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2

Protein Extraction and Analysis from Wound Tissue

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Extraction of total proteins from the wound edge tissue and HaCaT cells was done using Radio immunoprecipitation assay buffer (RIPA) buffer (Boster Biological Technology, China) as per the protocol stipulated by the manufacturer. The protein concentration was ascertained utilizing the BCA protein assay kit (Boster Biological Technology, China). Extracted proteins (100 μg) were isolated by a 10 percent SDS polyacrylamide gel (Bio-Rad, Hercules, CA, USA). Blocking of the membranes was done with 5 percent nonfat milk for 2 h at 25° C ensued by the incubation of the PVDF membrane with the antibodies over the night at 4° C. The rinse of the membranes was done thrice for 8 minutes each in moderate volume of 1 × TBST and then incubated with secondary antibody in a 37° C incubator for 2 hours. Protein visualization was done by an enhanced chemiluminescence system using a Fluor Chem FC system (Alpha Innotech, San Leandro, CA, USA). Image J densitometry analysis was conducted to analyze protein bands, and the fold expression is designated as the relative protein expression. Antibodies information is in Table 1.
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3

Western Blot Analysis of Primary GBM Cells

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Western blot assay was conducted with primary GBM cells separated from patients and cultured for two passages. Total amount of 50 mg protein in each group were separated on 10% SDS-PAGE, then transferred to a 0.22 mm PVDF membrane (Millipore). The membranes were blocked with 5% skimmed milk at room temperature for 2 h, and then incubated with specific primary antibodies at 4 °C overnight. The membranes were incubated with appropriate HRP-conjugated secondary antibodies diluted at 1:5000 (Boster) at 37 °C for 1 h. Protein bands on the membrane were visualized with ECL Kit (Millipore) using FluorChem FC system (Alpha Innotech Corporation).
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4

Western Blot Analysis of Phospho-PKCζ

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The cells were lysed in RIPA buffer (Heart Biological Technology Co., Ltd., Xi'an, China) containing 1% aprotinin, 1% activated Na3VO4 and 1% PMSF on ice. The protein concentration was detected according to the instructions of the Pierce™ BCA protein assay kit (Thermo Fisher Scientific, Rockford, IL, USA). Total proteins (50 µg) were loaded onto a 10% sodium dodecyl sulfate (SDS)-polyacrylamide gel, separated by electrophoresis and transfered onto PVDF membranes (Millipore, Boston, MA, USA). The membranes were blocked with 5% skim milk at room temperature for 2 h and then incubated with rabbit anti-human PKCζ (1:1,000, #sc-216; Santa Cruz Biotechnology, Inc., CA, USA), rabbit anti-human MMP2 (1:1,000, #10373-2-AP), MMP9 (1:500, #10375-2-AP), mouse anti-human β-actin (1:1,000, #60008-1-lg) (both from China Branch of Proteintech Co., Hubei, China) and rabbit anti-human phospho-PKCζ antibodies (1:500, #9378; Cell Signaling Technology, Boston, MA, USA) at 4°C overnight. The following day, the membranes were sequentially incubated with HRP-conjugated goat anti-rabbit IgG (1:3,000, #A0208) or HRP-conjugated goat anti-mouse IgG (1:3,000, #A0216) (Beyotime, Shanghai, China) at 37°C for 1 h. Immunoreactive proteins were detected using ECL reagent (Millipore) and the FluorChem FC system (Alpha Innotech, San Leandro, CA, USA). Bands were quantitated using ImageJ software.
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5

Western Blot Analysis of Fibrosis Markers

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To obtain total protein, tissues or HSF were lysed in RIPA buffer (Heart Biological Technology Co. Ltd, China) with Phenylmethanesulfonyl Fluoride (PMSF) added on ice. For western blot analysis, 30 μg of total protein was loaded onto a 10% Dodecyl Sulfate, Sodium Salt (SDS)-Polyacrylamide Gel Electrophoresis (SDS-PAGE) gel, separated and transferred to a Polyvinylidene Difluoride (PVDF) membrane at 100 V for 60–80 min. The membranes were blocked with 5% nonfat milk and then incubated with primary antibodies at 4°C overnight. The next day, the membrane was washed and incubated with secondary antibodies (1:3000; Cell Signaling Technology (CST)) at 37°C for 2 h. Immunoreactive proteins were then visualized using a chemiluminescence system with an Enhanced Chemiluminescence (ECL) reagents kit (Millipore, USA). Protein band intensity was detected using the Fluor Chem FC system (Alpha Innotech, USA). Antibodies were as follows: anti-Col1 (rabbit, 1:1000; Abcam), anti-Col3 (rabbit, 1:3000; Abcam), anti-α-SMA (rabbit, 1:1000; Abcam), anti-EZH2 (rabbit, 1:1000; Abcam) and anti-GAPDH (Rabbit, 1:3000; Abcam).
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6

Quantitative Western Blot Analysis

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For short, 50 μg of total protein were subjected to SDS-PAGE and transferred onto PVDF membranes. Membranes were blocked with 5% non-fat milk at room temperature for 3h, incubated with primary antibodies specific to SIRT1 (1:1000, Abcam, Cambridge, UK), NF-κB p65 (1:1000, CST, USA), acetyl-NF-κB p65 (1:1000, CST, USA) and β-actin (1:1000, CST, USA) at 4 °C overnight. On the next day, membranes were incubated with HRP-conjugated secondary antibodies diluted at 1:3000 (Boster, Wuhan, China) at 37 °C for 1 h. Protein bands on the membrane were visualized with ECL Kit (Millipore, USA) using FluorChem FC system (Alpha Innotech). Results were presented as densitometric ratio between the protein of interest and the loading control (β-actin).
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7

Western Blot Analysis of NLRP3 and Caspase-1

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Thirty micrograms of total protein was loaded per well, electrophoresed on a 12% sodium dodecyl sulfate polyacrylamide gel, and transferred onto a polyvinylidene difluoride membrane. The membrane was subsequently probed with polyclonal rabbit anti-rat NLRP3 (1 : 400; Biorbyt, Cambridge, UK) and Caspase-1 antibodies (1 : 200; Santa Cruz, USA) for 12 hours at 4°C. Membranes were subsequently incubated with appropriate HRP-conjugated secondary antibody at room temperature for 1 h. Immunoreactive traces were detected using a chemiluminescent HRP Substrate ECL Kit (Millipore, USA). The density of each protein band on the membrane was scanned using a FluorChem FC system (Alpha Innotech, San Jose, California, USA) and is presented as a densitometric ratio between the protein of interest and the loading control.
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8

Western Blot Analysis of Collagen and Smad Signaling

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Total protein lysates were generated using RIPA lysis buffer supplemented with protease and phosphatase inhibitor mixtures (KC-440; Shanghai KangChen Biological Technology Co., Shanghai, China). Nuclear protein extracts were obtained using the NE-PER nuclear and cytoplasmic extraction reagents (Pierce Biotechnology, Inc., Rockford, IL, USA), according to the manufacturer's instructions. Proteins (40 µg) were loaded onto a 5–10% polyacrylamide gel, separated by electrophoresis and transferred onto a polyvinylidene difluoride (PVDF) membrane. After blocking with 5% non-fat milk, the PVDF membrane was incubated with rabbit polyclonal antibodies to collagen I (ab96723) and III (ab7778) (both from Abcam, Cambridge, MA, USA), p-Smad2 (3108), Smad2 (3122), p-Smad3 (9520), Smad3 (9523) (all from Cell Signaling Technology, Inc.), HIF-1α (ab51608; Abcam) and histone H3 (sc-8654-R; Santa Cruz Biotechnology) or mouse polyclonal α-SMA antibody (BM0002; Wuhan Boster Biological Technology, Ltd., Wuhan, China) and β-actin antibody (4970; Cell Signaling Technology, Inc.). Horseradish peroxidase-conjugated goat anti-rabbit (BA1054) or anti-mouse (BA1050) antibody (Wuhan Boster Biological Technology, Ltd.) was used as a secondary antibody. Proteins were visualized by enhanced chemiluminescence system using FluorChem FC system (Alpha Innotech, San Leandro, CA, USA).
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9

Protein Extraction and Western Blot Analysis

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To extract proteins from cells and tissues, fibroblasts and scar tissue were collected, washed twice with PBS and lysed in cell lysis buffer (RIPA, Beyotime) supplemented with protease inhibitors (PMSF, China Bost). After lysis the samples were incubated on ice for 15 min. Cell debris was then removed by centrifugation at 12,000 x g for 5 min at 4°C. The protein concentration was determined using a BCA kit (Beyotime). Total protein (50 μg)_was run on a 10% SDS-PAGE gel and transferred to a PVDF transfer membrane (Millipore, Billerica) at 100 V for 40–100 min. The membrane was then blocked with 5% skim milk for 1 h at room temperature in TBST and probed with the following antibodies: COL1 (1 : 1000, Abcam, Cambridge, UK), COL3 (1 : 1000, Abcam, Cambridge, UK), α-SMA (1 : 1000, CST, USA), CD9, CD63 (1 : 1000, Proteintech, China), Smad2 antibody sampling kit (1 : 1000, CST) and β-actin (1 : 1000, Xi’an Johnson & Johnson) and incubated overnight at 4°C. The next day, the samples were incubated with enzyme-labeled anti-rabbit IgG secondary antibody (1 : 3000, Bots, Wuhan, China) for 1 h at 37°C. Proteins were detected by chemiluminescence with an ECL kit (ECL Kit, MA, USA), immunoblotting of membranes was probed with a FluorChem FC system (Alpha Innotech), protein expression intensity was analyzed with ImageJ software and β-actin was used to normalize.
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10

Protein Expression Analysis of Apoptotic Regulators

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To assess the protein levels of Bcl-2, cleaved-caspase-3, Ac-FoxO1, Ac-NF-κB, and Ac-p53, 50 μg of total protein were subjected to SDS-PAGE and transferred onto PVDF membranes. Membranes were blocked with 5% non-fat milk at room temperature for 3 h, incubated with primary antibodies specific to Bcl-2 (1:1000, Abcam, Cambridge, UK), cleaved-caspase-3 (1:1000, Abcam), Ac-FoxO1 (1:1000, Abcam), Ac-NF-κB (1:1000, Cell Signaling Technology, Beverly, MA), Ac-p53 (1:1000, Cell Signaling Technology), BAX (1:1000, Cell Signaling Technology), SIRT1 (1:1000, Cell Signaling Technology), or β-actin (1:1000, Abcam) at 4 °C overnight. Then, membranes were incubated with HRP-conjugated secondary antibodies diluted at 1:3000 (Boster, Wuhan, China) at 37 °C for 1 h. Protein bands on the membrane were visualized with ECL Kit (Millipore, USA) using FluorChem FC system (Alpha Innotech). Results were presented as densitometric ratio between the protein of interest and the loading control (β-actin).
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