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The D1817 is a laboratory instrument designed for automated DNA extraction and purification. It utilizes magnetic bead-based technology to isolate and purify DNA from a variety of sample types, such as blood, tissue, and cell cultures. The core function of the D1817 is to provide a streamlined and efficient process for obtaining high-quality DNA samples for downstream applications, such as PCR, sequencing, and molecular analysis.

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18 protocols using d1817

1

Tracing Regenerated Motor Neurons

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Some recipient rats were intravenously administered 200 µL of 5 mg/mL tetramethylrhodamine-labelled dextran (10,000 MW) (D1817; Thermo Fisher Scientific, Waltham, MA, USA) one hour prior to collecting the regenerated MNs31 (link),41 (link). The collected specimens were analysed by immunostaining.
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2

Fluorescent Probes for Cell Imaging

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We obtained FM4-64, LysoTracker, Alexa 647-EGF, Alexa-555 EGF and TRITC-dextran (T13320, L7528, E35351, E35350 and D1817, respectively) from Thermo Fisher Scientific (Waltham, MA), as well as EZ-Link Sulfo-NHS-SS-Biotin, Alexa Fluor 488 TFP ester, Ni-NTA Agarose, 7 kDa MWCO Zeba Spin Desalting Columns and Hoechst 33342. Peroxidase-conjugated secondary antibodies were from Bio-Rad Laboratories (Hercules, CA), MBPTrap HD 5mL columns, Glutathione Sepharose 4B and Dextrin Sepharose High Performance from GE Healthcare (Anaheim, CA), and the cOmplete Protease Inhibitor Cocktail from Roche (Basel, Switzerland). We obtained DOPC, DSPE-PEG-Biotin, DOPE, DOPS and lissamine rhodamine B sulfonyl (18:1) Rhod PE from Avanti Polar Lipids (Alabaster, AL, and the lysosomotropic reagent L-leucyl-L-leucine methyl ester (LLOMe) from Sigma-Aldrich (St. Louis, MO). Other reagents and chemicals were obtained from Sigma-Aldrich (St. Louis, MO)
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3

Tracing Kidney Vasculature with Dextran

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Eight weeks after the injection, the host mice were injected with 15 mg/kg of tetramethylrhodamine-conjugated, 10-kDa, low-molecular-weight dextran (D1817, Thermo Fisher Scientific) into the inferior vena cava twice under general anesthesia. The first and second injections were timed 5 min apart. Ten minutes after the first injection, the left kidneys were collected, and the hosts were immediately euthanized by phlebotomy.
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4

Fluorescent Probes for Cell Imaging

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We obtained FM4-64, LysoTracker, Alexa 647-EGF, Alexa-555 EGF and TRITC-dextran (T13320, L7528, E35351, E35350 and D1817, respectively) from Thermo Fisher Scientific (Waltham, MA), as well as EZ-Link Sulfo-NHS-SS-Biotin, Alexa Fluor 488 TFP ester, Ni-NTA Agarose, 7 kDa MWCO Zeba Spin Desalting Columns and Hoechst 33342. Peroxidase-conjugated secondary antibodies were from Bio-Rad Laboratories (Hercules, CA), MBPTrap HD 5mL columns, Glutathione Sepharose 4B and Dextrin Sepharose High Performance from GE Healthcare (Anaheim, CA), and the cOmplete Protease Inhibitor Cocktail from Roche (Basel, Switzerland). We obtained DOPC, DSPE-PEG-Biotin, DOPE, DOPS and lissamine rhodamine B sulfonyl (18:1) Rhod PE from Avanti Polar Lipids (Alabaster, AL, and the lysosomotropic reagent L-leucyl-L-leucine methyl ester (LLOMe) from Sigma-Aldrich (St. Louis, MO). Other reagents and chemicals were obtained from Sigma-Aldrich (St. Louis, MO)
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5

Labeling Brain Vasculature with TMR-Dextran

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10-kDa Tetramethylrhodamine (TMR)-dextran (ThermoFisher # D1817) was dissolved in sterile DPBS at a concentration of 10 mg/ml. TMR dextran was administered as previously described elsewhere [22 (link)]. Following circulation of the dextran tracer brains were harvested in ice-cold DPBS and fixed in 4% PFA overnight. Fixed brains were washed in DPBS the next day, followed by incubation in 30% sucrose for 48 h at 4˚C before embedding in tissue freezing media. 50 μm thick free-floating sections were cut using a Leica cryostat.
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6

Tracing Vascular Permeability in CNS

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Dextran-Tetramethylrhodamine tracer (Dextran-Tetramethylrhodamine, 10-kDa, D1817, ThermoFisher) was injected into mice through tail vein injection, and allowed to circulate for 6 hours. Brain and spinal cord were then dissected immediately and fixed by immersion fixation overnight in 4% PFA to immobilize the tracers at the end of the experiment. The Dextran-Tetramethylrhodamine tracer leakage was assessed within frozen sections.
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7

Intravital Imaging of Mouse Ear Vasculature

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Intravital imaging of the mouse ear with intradermal injection has been described previously (Honkura et al., 2018 (link)). Briefly, following systemic administration of 2000 kDa FITC (SigmaAldrich, FD2000S) or TRITC Dextran (ThermoFischer Scientific, D7139) by tail-vein injection, mice were sedated by intraperitoneal injection of Ketamine-Xylazine (120 mg/kg Ketamine, 10 mg/kg Xylazine) and the ear secured to a solid support. Mice were maintained at a body temperature of 37 °C for the entire experiment, maximum 90 min. Time-lapse imaging was performed using single-photon microscopy (Leica SP8). For intradermal EC stimulation, a volume of approximately 0.1 μl histamine (SigmaAldrich, H7125), concentration 10 ng/μl, was injected using a sub-micrometer capillary needle. 10 kDa TRITC Dextran (ThermoFischer Scientific, D1817) was used as a tracer. Leakage sites were identified in time-lapse imaging as defined sites of concentrated dextran in the extravascular space.
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8

Meis1 and Pbx3 Knockdown in X. tropicalis

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Wild-type X. tropicalis embryos were staged to NF stage 3 (4 cell). Using a microinjector, the two dorsally-fated blastomeres were both injected with 2 nL of morpholino mix. Morpholino mix contained a morpholino against meis1 (MO1:8 ng or MO2:16 ng) or against pbx3 (MO1:10 ng or MO2:10 ng) and a labeled dextran tracer (used at 2 mg/mL, ThermoFisher D1817). Embryos were screened at stage 18 for bilateral red fluorescence in the nervous system tissues. Neurulas were raised to stage 41 and used for regeneration assays. Morphant regenerates were collected at 24hpa, 48hpa, and 72hpa for measurement analysis.
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9

Dextran-Tetramethylrhodamine BBB Leakage

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To estimate dextran–tetramethylrhodamine leakage, we injected 2 mg/20 g of body weight fluorescence-tagged dextran (D1817; Thermo Fisher Scientific) into the left ventricle and allowed it to cross the intact BBB for 10 min. After perfusion, brains were isolated, fixed, and immersed into a frozen section medium, then treated as described for immunohistochemistry. The presence of fluorescence in the cortical and striatum areas was focused and calculated to quantify BBB leakage.
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10

Tracing Vascular Permeability in CNS

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Dextran-Tetramethylrhodamine tracer (Dextran-Tetramethylrhodamine, 10-kDa, D1817, ThermoFisher) was injected into mice through tail vein injection, and allowed to circulate for 6 hours. Brain and spinal cord were then dissected immediately and fixed by immersion fixation overnight in 4% PFA to immobilize the tracers at the end of the experiment. The Dextran-Tetramethylrhodamine tracer leakage was assessed within frozen sections.
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