The largest database of trusted experimental protocols

4 protocols using tmao d9

1

Quantifying Serum TMAO Levels

Check if the same lab product or an alternative is used in the 5 most similar protocols
In this study, serum TMAO was measured by high-performance liquid chromatography-tandem mass spectrometry (HPLC-MS/MS). The sample was prepared by adding 10 uL of TMAO d9 (Toronto Research Chemicals Inc., Toronto, Canada) to 100 uL serum; 300 uL of acetonitrile precipitated the protein, vortexed for 1 min, centrifuged at 1,000 rpm, 4°C for 5 min; and 200 uL of the remaining supernatant was injected into a Waters Atlantis HILIC Silica column for analysis.
+ Open protocol
+ Expand
2

Metabolite Standards for Analytical Methods

Check if the same lab product or an alternative is used in the 5 most similar protocols
Sigma Aldrich (St Quentin Fallavier, France) provided indole-3-acetic acid, indoxyl sulfate, hippuric acid, kynurenic acid, TMAO, phenylalanine, kynurenine, indole-3-acetic acid-d5, tryptophan, tyrosine, sodium hydrogen phosphate, formic acid, and dimethylsulfoxide (DMSO). Phenylacetyl-L-glutamine, Phenylacetyl-L-glutamine-d5, PCS, kynurenine-d4, p-cresyl-sulfate-d7, p-cresyl glucuronide, hippuric acid-d5, p-cresyl glucuronide-d7, TMAO-d9, tyrosine-d4, tryptophan-d5, phenylalanine-d5, kynurenic acid-d5, and 3-carboxy-4-methyl-5-propyl-2-furan were provided by Toronto Research Chemicals (North York, Toronto, ON, Canada). VWR Chemicals (Radnor, PA, USA) supplied the sodium dihydrogen phosphate and sodium chloride. Fisher Scientific (Illkirch, France) provided the LC-MS-grade methanol, water, and acetonitrile.
+ Open protocol
+ Expand
3

Quantification of Uremic Toxins by LC-MS/MS

Check if the same lab product or an alternative is used in the 5 most similar protocols
Reference standards, i.e., ADMA, SDMA, and TMAO, as well as internal standards ADMA-d6 and TMAO-d9 were purchased from Toronto Research Chemicals (Toronto, Canada).
Uremic toxins were determined with validated high-performance liquid chromatography coupled to mass spectrometry (LC-MS/MS) using multiple-reaction-monitoring (MRM) mode on Agilent 1260 Infinity (Agilent Technologies, Santa Clara, CA, USA) coupled to QTRAP 4000 (AB Sciex, Framingham, MA, USA). MRM transitions, declustering potential (DP), and collision energy (CE) were: ADMA, m/z 203 > 46 (DP = 61V, CE = 41V); SDMA, m/z 203 > 172 (DP = 61V, CE = 19V); ADMA-d6, m/z 209 > 77 (DP = 66V, CE = 45V); TMAO, m/z 76 > 42 (DP = 66V, CE = 53V); and TMAO-d9, m/z 85 > 46 (DP = 61V, CE = 59V), respectively. Chromatographic separation was achieved using a SeQuant® ZIC®-HILIC (50 × 2.1 mm, 5 μm, Merck (Darmstadt, Germany)) column. The column was maintained at 25 °C at a flow rate of 0.5 mL min−1. The mobile phases consisted of 20 mM ammonium acetate as eluent A and acetonitrile with 0.2% formic acid as eluent B. The gradient (%B) was as follows: 0 min, 95%; 1 min, 95%; 7 min, 50%; and 8 min, 50%. The injection volume was 5 μL. Urine samples (0.1 mL) prior to injection with LC were mixed with internal standards (0.1 mL, 6 μg/mL) and acetonitrile (0.6 mL), vortexed at high speed (3 min), and centrifuged (5 min at 10,000 g).
+ Open protocol
+ Expand
4

Quantification of Plasma TMAO by LC-MS/MS

Check if the same lab product or an alternative is used in the 5 most similar protocols
We measured TMAO in plasma by liquid chromatography/mass spectrometry/mass spectrometry using TMAO-D9 (Toronto Research Chemicals, Canada) as the internal standard [21 (link)]. 100 μL plasma was deproteinized by mixture with 500 μL methanol containing TMAO-D9 (internal standard solution) at the concentration of 1 µg/mL. Then, the samples were centrifuged at 12,000 × g for 10 min. After that, 100 μL supernatants were transferred, diluted with an equal volume of distilled water and placed in autosampler at 4 °C. Then 10 μL of each sample supernatant was injected in Agilent 1100 HPLC system (Agilent, USA), and analytes were separated on a column (100 mm × 2.1 mm, 5 µm, Venusil XBP Phenyl column; Phenomenex, Torrance, CA) at 40 °C. The mobile phase was 0.1% formic acid (v/v) and the methanol flow rate was 0.4 mL/min. Mass spectrometry was performed on an API 3000 Triple Quadrupole Mass Spectrometer (Applied Biosystems, USA) with electrospray ionization in the positive mode, and ion transitions used for quantitation were m/z 76.0→59.0 for TMAO and m/z 85.1→68.0 for TMAO-D9.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!