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5 protocols using fluoromont g mounting medium

1

Histological Verification of Electrode Placement

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After approximately a month of experimentation, rats were deeply anesthetized with a lethal dose of Euthasol (130 mg/kg) injected intraperitoneally, and then perfused intracardially with 0.9% NaCl, followed with 4% paraformaldehyde in 0.1 M phosphate buffered saline at pH 7.2 (PBS) for 15 min at a rate of 20 ml per min. Brains with electrodes were soaked in 4% paraformaldehyde overnight. The following day, electrodes were removed from the brain and the brains were cryoprotected in 30% sucrose at 4°C, and the region spanning the entire electrode sectioned in the horizontal plane at 50 µm thickness using a freezing microtome, collected in series of 4 in PBS. All sections were counterstained with the nuclear dye DAPI. Sections were rinsed with PBS, and then mounted on glass slides with Fluoromont-G mounting medium (Southern Biotech, Birmingham, AL) for fluorescence microscopy. Sections were visualized using a Nikon eclipse E400 microscope to verify electrode locations.
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2

Evaluating Cell Proliferation with Immunofluorescence

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Cells were treated with DMSO (1% v/v), TGFβ1 (5 ng·mL−1), and/or NOX1/4 inhibitor (GKT137831) (20 µm) during 24h in N2B27 medium. After treatment, cells were washed with PBS and fixed with 3.7% (w/v) paraformaldehyde in PBS for 15 min. Subsequently, cells were washed with PBS and blocked with 10% FBS in PBS with 1% BSA for 1 h, at RT. Then, cells were permeabilised with 0.1% Triton‐X‐100 in 0.1% BSA for 5 min. Next, cells were incubated at RT for 2 h with primary antibodies against Ki67 (1 : 1000 in PBS containing 1% BSA, rabbit, ab15580; Abcam®). Afterwards, cells were washed in PBS and incubated for 1 h in dark at RT with donkey anti‐Rabbit IgG Alexa Fluor 488 secondary antibody (1 : 200 in PBS with 1% BSA, A21206; Thermo Fisher Scientific). Then, cells were incubated in dark at RT for 5 min with DAPI (1 : 1000 in PBS with 1% BSA; Sigma‐Aldrich Co.). Later, cells were washed three times with PBS and the coverslips were mounted on the slides using Fluoromont‐G® mounting medium (Southern Biotech, Birmingham, AL, USA) and dried in dark at RT. Pictures were acquired with the fluorescence microscope Eclipse 90i and processed using NIS‐Elements software (Nikon, Tokyo, Japan). The quantification of the proliferative phenotype of cells was performed by quantifying Ki67‐positive cells, and total number of nuclei per picture using fiji image j software [35 (link)].
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3

Autofluorescence and Immunofluorescence Analysis of Cells

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For the microscopic analysis of autofluorescence, cells were grown on coverslips for 16hr, treated with 50 μM for 3 h before being fixed with 4% PFA. After mounting with Fluoromont-G mounting medium (Southern biotech), coverslips were observed with a Zeiss confocal microscope and fluorescence spectra induced by menadione treatment was evaluated in multiple regions of interest (ROI) within the same cell.
For indirect immunofluorescence analysis, cells were fixed on coverslips for 15 min with 4% PFA and then permeabilized for 5 min with Triton 0.2% at room temperature. AIF protein was detected by incubation with an anti-AIF pAB (1:100 dilution in PBS / 1% BSA / 2% goat serum) followed by Alexafluor-647-conjugated goat anti-rabbit (Life Technologies). DNA was stained with Hoechst 3342 or TO-PRO-3 (Life Technologies). Sample slides were then mounted using the reagent Fluoromont-G (Southern Biotech) and observed by confocal microscopy (LSM-510; Carl Zeiss Microimaging) equipped with an X63 objective.
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4

Immunolabelling of Phosphorylated AKT

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Sections were rinsed with 0.1 M PBS and incubated for 48 h at room temperature with rabbit anti-phospho AKT (1:4000, Cell signaling # 9275). After rinsing, sections were incubated with donkey anti-rabbit IgG conjugated with Alexa 488 secondary antibody (1:400; Jackson Immuno Research: West Grove, PA, USA). Finally, the sections were coverslipped with Fluoromont-G mounting medium (Southern Biotechnology Associates: Birmingham, AL, USA). Photomicrographs were acquired using a Leica confocal laser scanning microscope. The immunoreactive structures were excited using argon or helium-neon green lasers with the excitation and barrier filters set for the fluorochrome used (green). Images showing the fluorescence were obtained from sequentially acquired images of slices excited by the laser.
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5

Immunofluorescence Imaging of Recombinant Proteins

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To verify the expression of recombinant proteins in human cells, cells were seeded on 12 mm cover slips. After transfection, cells were fixed in 4% paraformaldehyde (PFA) in PBS, pH 7.4 at room temperature for 15 min. Next, cells were permeabilized with 0.5% Triton in PBS for 5 min and blocked in Roti Immunoblock (Roth) at 4°C overnight. To stain HA (Hemagglutinin peptide)-tagged or EYFP (Enhanced Yellow Fluorescent Protein)-tagged proteins, respectively, the fixed cells were incubated for 1 h in a 1:500 diluted solution of primary antibody (α-HA rabbit, abcam ab9110, or monoclonal α-GFP mouse, Roth, respectively), washed in PBS and afterwards incubated for 1 h in a 1:1000 diluted Alexa594 labelled secondary antibody (Thermo Fisher) solution and DAPI (4,6-diamidino-2-phenylindole). After final washing, the cells were mounted on microscope slides using Fluoromont-G mounting medium (Southernbiotech). The localization of EYFP- and HA-tagged PPR proteins was examined on a Nikon Eclipse Ti2 system, equipped with a PlanFluor 40× Oil objective (NA 1.3) using the NIS-Elements AR software and ImageJ/Fiji version 1.53c for Windows. Transfection rates were calculated using Fiji as outlined in Supplementary Figure S1.
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